MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 106199 bp
Accession: NZ_CP126340 Location: 1..106199 Organism: Atlantibacter hermannii strain TL13 Replicon: plasmid pTL13A
Accession: NZ_CP126340 Location: 1..106199 Organism: Atlantibacter hermannii strain TL13 Replicon: plasmid pTL13A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN094_RS20000 (QN094_20000) | 385..642 | - | 258 | WP_278186927.1 | DNA polymerase III subunit theta | - |
| QN094_RS20005 (QN094_20005) | 829..1032 | - | 204 | WP_165463674.1 | hypothetical protein | - |
| QN094_RS20010 (QN094_20010) | 1074..1580 | - | 507 | WP_165463675.1 | antirestriction protein ArdA | - |
| QN094_RS20015 (QN094_20015) | 2058..2483 | - | 426 | WP_165463676.1 | DUF1380 family protein | - |
| QN094_RS20020 (QN094_20020) | 2531..2755 | - | 225 | WP_165463677.1 | hypothetical protein | - |
| QN094_RS20025 (QN094_20025) | 2752..3432 | - | 681 | WP_284556514.1 | DNA methylase | - |
| QN094_RS20030 (QN094_20030) | 3934..4674 | + | 741 | WP_284556515.1 | GIY-YIG nuclease family protein | - |
| QN094_RS20035 (QN094_20035) | 4671..5069 | + | 399 | WP_284556516.1 | hypothetical protein | - |
| QN094_RS20040 (QN094_20040) | 5191..5730 | - | 540 | WP_284556517.1 | hypothetical protein | - |
| QN094_RS20045 (QN094_20045) | 6016..6264 | - | 249 | WP_284556518.1 | hypothetical protein | - |
| QN094_RS20050 (QN094_20050) | 6276..6935 | - | 660 | WP_284556519.1 | plasmid partitioning/stability family protein | - |
| QN094_RS20055 (QN094_20055) | 6938..7909 | - | 972 | WP_284556520.1 | plasmid segregation protein ParM | - |
| QN094_RS20060 (QN094_20060) | 8177..8566 | + | 390 | WP_277108966.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QN094_RS20065 (QN094_20065) | 8566..9840 | + | 1275 | WP_284556521.1 | Y-family DNA polymerase | - |
| QN094_RS20070 (QN094_20070) | 10288..11043 | + | 756 | WP_080218269.1 | replication initiation protein RepE | - |
| QN094_RS20075 (QN094_20075) | 11467..12819 | - | 1353 | WP_284556522.1 | hypothetical protein | - |
| QN094_RS20080 (QN094_20080) | 13071..13697 | + | 627 | WP_019843183.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QN094_RS20085 (QN094_20085) | 13694..13999 | + | 306 | WP_206160282.1 | hypothetical protein | - |
| QN094_RS20090 (QN094_20090) | 14871..15083 | - | 213 | WP_284556523.1 | hypothetical protein | - |
| QN094_RS20095 (QN094_20095) | 15275..15532 | + | 258 | WP_284556524.1 | hypothetical protein | - |
| QN094_RS20100 (QN094_20100) | 15940..16710 | - | 771 | WP_284556529.1 | site-specific integrase | - |
| QN094_RS20105 (QN094_20105) | 16793..17509 | - | 717 | WP_284556525.1 | hypothetical protein | - |
| QN094_RS20110 (QN094_20110) | 17562..17909 | - | 348 | WP_284555106.1 | hypothetical protein | - |
| QN094_RS20115 (QN094_20115) | 18506..18736 | + | 231 | WP_284555105.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QN094_RS20120 (QN094_20120) | 18733..19149 | + | 417 | WP_284556526.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QN094_RS20125 (QN094_20125) | 19323..19526 | + | 204 | Protein_25 | IS6 family transposase IS6100 | Transposase |
| QN094_RS20130 (QN094_20130) | 19600..20304 | + | 705 | WP_001067848.1 | IS6 family transposase IS15DI | Transposase |
| QN094_RS20135 (QN094_20135) | 20511..20849 | - | 339 | WP_002310911.1 | hypothetical protein | - |
| QN094_RS20140 (QN094_20140) | 20753..21943 | - | 1191 | WP_000841446.1 | Tetracycline resistance protein, class C | ARG |
| QN094_RS20145 (QN094_20145) | 22036..22695 | + | 660 | WP_001038045.1 | tetracycline resistance transcriptional repressor TetR(C) | - |
| QN094_RS20150 (QN094_20150) | 22682..23221 | + | 540 | Protein_30 | helix-turn-helix transcriptional regulator | - |
| QN094_RS20155 (QN094_20155) | 23528..24232 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN094_RS20160 (QN094_20160) | 24266..24403 | - | 138 | WP_284556527.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QN094_RS20165 (QN094_20165) | 24567..25124 | + | 558 | WP_001217881.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QN094_RS20170 (QN094_20170) | 25307..26167 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QN094_RS20175 (QN094_20175) | 26314..27216 | + | 903 | Protein_35 | TCR/Tet family MFS transporter | - |
| QN094_RS20180 (QN094_20180) | 27183..27371 | - | 189 | Protein_36 | IS91 family transposase | - |
| QN094_RS20185 (QN094_20185) | 27483..27788 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| QN094_RS20190 (QN094_20190) | 27816..29030 | - | 1215 | WP_000214121.1 | Bicyclomycin resistance protein | ARG |
| QN094_RS20195 (QN094_20195) | 29247..30131 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| QN094_RS20200 (QN094_20200) | 30162..31655 | - | 1494 | WP_001120888.1 | IS91 family transposase ISVsa3 | Transposase |
| QN094_RS20205 (QN094_20205) | 31866..32090 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| QN094_RS20210 (QN094_20210) | 32087..32824 | - | 738 | WP_001366550.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QN094_RS20215 (QN094_20215) | 33310..33450 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| QN094_RS20220 (QN094_20220) | 33456..34160 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN094_RS20225 (QN094_20225) | 34197..35216 | - | 1020 | WP_087835291.1 | IS91 family transposase ISAzo26 | Transposase |
| QN094_RS20230 (QN094_20230) | 35508..36062 | + | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| QN094_RS20235 (QN094_20235) | 36159..36611 | + | 453 | WP_001749986.1 | hypothetical protein | ARG |
| QN094_RS20240 (QN094_20240) | 36744..37217 | + | 474 | WP_001749985.1 | Dihydrofolate reductase type 1 | ARG |
| QN094_RS20245 (QN094_20245) | 37398..38243 | + | 846 | WP_001749984.1 | Streptomycin 3''-adenylyltransferase | ARG |
| QN094_RS20250 (QN094_20250) | 38360..38707 | + | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QN094_RS20255 (QN094_20255) | 38701..39540 | + | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QN094_RS20260 (QN094_20260) | 39945..41486 | + | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QN094_RS20265 (QN094_20265) | 41951..42859 | + | 909 | WP_001749993.1 | putative oxidoreductase YghA | VF |
| QN094_RS20270 (QN094_20270) | 42951..43595 | - | 645 | WP_001749994.1 | Pentapeptide repeat protein | ARG |
| QN094_RS20275 (QN094_20275) | 43690..43785 | - | 96 | Protein_55 | helix-turn-helix domain-containing protein | - |
| QN094_RS20280 (QN094_20280) | 43826..44173 | + | 348 | WP_000679427.1 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| QN094_RS20285 (QN094_20285) | 44167..45005 | + | 839 | Protein_57 | Dihydropteroate synthase | ARG |
| QN094_RS20290 (QN094_20290) | 45133..45633 | + | 501 | WP_000376623.1 | GNAT family N-acetyltransferase | - |
| QN094_RS20295 (QN094_20295) | 45954..46022 | + | 69 | Protein_59 | EAL domain-containing protein | - |
| QN094_RS20300 (QN094_20300) | 46140..46904 | + | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| QN094_RS20305 (QN094_20305) | 47044..47109 | - | 66 | Protein_61 | EAL domain-containing protein | - |
| QN094_RS20310 (QN094_20310) | 47165..48379 | + | 1215 | WP_004098817.1 | type II site-specific deoxyribonuclease | - |
| QN094_RS20315 (QN094_20315) | 48413..49846 | - | 1434 | WP_001288432.1 | DNA cytosine methyltransferase | - |
| QN094_RS20320 (QN094_20320) | 49945..50217 | + | 273 | Protein_64 | IS1 family transposase | - |
| QN094_RS20325 (QN094_20325) | 50228..50434 | - | 207 | WP_001749967.1 | hypothetical protein | - |
| QN094_RS20330 (QN094_20330) | 50565..51269 | + | 705 | WP_001067848.1 | IS6 family transposase IS15DI | Transposase |
| QN094_RS20335 (QN094_20335) | 51476..52894 | + | 1419 | WP_284556528.1 | PIN-like domain-containing protein | - |
| QN094_RS20340 (QN094_20340) | 53352..54440 | + | 1089 | WP_284556486.1 | transcriptional regulator | - |
| QN094_RS20345 (QN094_20345) | 54468..56294 | - | 1827 | WP_284556487.1 | ATP-binding protein | - |
| QN094_RS20350 (QN094_20350) | 56291..57337 | - | 1047 | WP_284556488.1 | SIR2 family protein | - |
| QN094_RS20355 (QN094_20355) | 58294..58665 | + | 372 | WP_284556489.1 | type II toxin-antitoxin system VapC family toxin | - |
| QN094_RS20360 (QN094_20360) | 58880..59215 | + | 336 | WP_284556490.1 | colicin E1 family microcin immunity protein | - |
| QN094_RS20365 (QN094_20365) | 59245..59747 | + | 503 | Protein_73 | Tn3 family transposase | - |
| QN094_RS20370 (QN094_20370) | 60458..61225 | + | 768 | WP_284556491.1 | TraX family protein | - |
| QN094_RS20375 (QN094_20375) | 62027..63043 | - | 1017 | WP_284556492.1 | plasmid replication initiator RepA | - |
| QN094_RS20380 (QN094_20380) | 63661..64443 | - | 783 | WP_206160276.1 | DsbA family protein | - |
| QN094_RS20385 (QN094_20385) | 64468..69894 | - | 5427 | WP_284556493.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| QN094_RS20390 (QN094_20390) | 69891..72449 | - | 2559 | WP_284556494.1 | type IV conjugative transfer system coupling protein TraD | - |
| QN094_RS20395 (QN094_20395) | 72678..73409 | - | 732 | WP_277109003.1 | conjugal transfer complement resistance protein TraT | - |
| QN094_RS20400 (QN094_20400) | 73540..74256 | - | 717 | WP_284556495.1 | hypothetical protein | - |
| QN094_RS20405 (QN094_20405) | 74253..78095 | - | 3843 | WP_284556496.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QN094_RS20410 (QN094_20410) | 78095..79456 | - | 1362 | WP_284556497.1 | conjugal transfer pilus assembly protein TraH | - |
| QN094_RS20415 (QN094_20415) | 79449..79718 | - | 270 | WP_284556498.1 | hypothetical protein | - |
| QN094_RS20420 (QN094_20420) | 79735..80343 | - | 609 | WP_284556499.1 | F-type conjugal transfer protein TrbB | - |
| QN094_RS20425 (QN094_20425) | 80333..80551 | - | 219 | WP_165463584.1 | hypothetical protein | - |
| QN094_RS20430 (QN094_20430) | 80585..81364 | - | 780 | WP_284556500.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QN094_RS20435 (QN094_20435) | 81361..83190 | - | 1830 | WP_284556501.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QN094_RS20440 (QN094_20440) | 83187..83807 | - | 621 | WP_284556502.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QN094_RS20445 (QN094_20445) | 83817..84803 | - | 987 | WP_284556503.1 | conjugal transfer pilus assembly protein TraU | - |
| QN094_RS20450 (QN094_20450) | 84800..85126 | - | 327 | WP_165463589.1 | hypothetical protein | - |
| QN094_RS20455 (QN094_20455) | 85190..85411 | - | 222 | WP_080218296.1 | hypothetical protein | - |
| QN094_RS20460 (QN094_20460) | 85515..86084 | - | 570 | WP_080218295.1 | hypothetical protein | - |
| QN094_RS20465 (QN094_20465) | 86075..86368 | - | 294 | WP_019843227.1 | hypothetical protein | - |
| QN094_RS20470 (QN094_20470) | 86365..87000 | - | 636 | WP_165463592.1 | type-F conjugative transfer system protein TraW | - |
| QN094_RS20475 (QN094_20475) | 86997..87410 | - | 414 | WP_284556504.1 | type-F conjugative transfer system protein TrbI | - |
| QN094_RS20480 (QN094_20480) | 87407..90007 | - | 2601 | WP_284556505.1 | type IV secretion system protein TraC | - |
| QN094_RS20485 (QN094_20485) | 90007..90561 | - | 555 | WP_284556506.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QN094_RS20490 (QN094_20490) | 90648..92051 | - | 1404 | WP_284556507.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QN094_RS20495 (QN094_20495) | 92048..92788 | - | 741 | WP_165463596.1 | type-F conjugative transfer system secretin TraK | - |
| QN094_RS20500 (QN094_20500) | 92800..93384 | - | 585 | WP_284556508.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| QN094_RS20505 (QN094_20505) | 93390..93692 | - | 303 | WP_019843219.1 | type IV conjugative transfer system protein TraL | - |
| QN094_RS20510 (QN094_20510) | 93696..94049 | - | 354 | WP_019843218.1 | type IV conjugative transfer system pilin TraA | - |
| QN094_RS20515 (QN094_20515) | 94246..94887 | + | 642 | WP_284556509.1 | Arc family DNA-binding protein | - |
| QN094_RS20520 (QN094_20520) | 94920..95315 | - | 396 | WP_284556510.1 | conjugal transfer protein | - |
| QN094_RS20525 (QN094_20525) | 95893..96438 | + | 546 | WP_165463599.1 | hypothetical protein | VF |
| QN094_RS20530 (QN094_20530) | 96474..97295 | - | 822 | WP_284556511.1 | DUF932 domain-containing protein | - |
| QN094_RS20535 (QN094_20535) | 97357..97569 | - | 213 | WP_165463601.1 | hypothetical protein | - |
| QN094_RS20540 (QN094_20540) | 98293..99117 | - | 825 | WP_165463602.1 | N-6 DNA methylase | - |
| QN094_RS20545 (QN094_20545) | 99163..99309 | - | 147 | WP_033876058.1 | hypothetical protein | - |
| QN094_RS20550 (QN094_20550) | 99402..99758 | - | 357 | WP_165463603.1 | hypothetical protein | - |
| QN094_RS20555 (QN094_20555) | 99814..100182 | - | 369 | WP_165463604.1 | hypothetical protein | - |
| QN094_RS20560 (QN094_20560) | 101004..101123 | - | 120 | WP_277109009.1 | type I toxin-antitoxin system Hok family toxin | - |
| QN094_RS20565 (QN094_20565) | 101071..101208 | - | 138 | Protein_113 | DUF5431 family protein | - |
| QN094_RS20570 (QN094_20570) | 101470..101790 | - | 321 | WP_165463668.1 | theronine dehydrogenase | - |
| QN094_RS20575 (QN094_20575) | 101787..102518 | - | 732 | WP_284556512.1 | plasmid SOS inhibition protein A | - |
| QN094_RS20580 (QN094_20580) | 102515..102946 | - | 432 | WP_165463670.1 | conjugation system SOS inhibitor PsiB | - |
| QN094_RS20585 (QN094_20585) | 102990..104993 | - | 2004 | WP_284556513.1 | ParB/RepB/Spo0J family partition protein | - |
| QN094_RS20590 (QN094_20590) | 105064..105294 | - | 231 | WP_165463672.1 | DUF905 domain-containing protein | - |
| QN094_RS20595 (QN094_20595) | 105353..105889 | - | 537 | WP_165463673.1 | single-stranded DNA-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|