MGE detailed information
MGE type: Mobilizable plasmid MGE length: 54472 bp
Accession: NZ_CP126333 Location: 1..54472 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHD
Accession: NZ_CP126333 Location: 1..54472 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHD
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN090_RS23860 (QN090_23860) | 253..1074 | + | 822 | WP_004193237.1 | hypothetical protein | - |
| QN090_RS23865 (QN090_23865) | 1032..1220 | + | 189 | Protein_2 | LacI family transcriptional regulator | - |
| QN090_RS23870 (QN090_23870) | 1409..1639 | - | 231 | WP_004193241.1 | phage shock protein PspD | - |
| QN090_RS23875 (QN090_23875) | 1648..2007 | - | 360 | WP_004193243.1 | envelope stress response membrane protein PspC | - |
| QN090_RS23880 (QN090_23880) | 2007..2231 | - | 225 | WP_004193245.1 | envelope stress response membrane protein PspB | - |
| QN090_RS23885 (QN090_23885) | 2286..2954 | - | 669 | WP_003020532.1 | phage shock protein PspA | - |
| QN090_RS23890 (QN090_23890) | 3110..4099 | + | 990 | WP_017900991.1 | Psp operon transcriptional activator | VF |
| QN090_RS23895 (QN090_23895) | 4182..4826 | + | 645 | WP_017900990.1 | Pentapeptide repeat protein | ARG |
| QN090_RS23900 (QN090_23900) | 4922..5830 | - | 909 | WP_284564834.1 | putative oxidoreductase YghA | VF |
| QN090_RS23905 (QN090_23905) | 6007..6522 | - | 516 | WP_017900989.1 | 2-oxo-tetronate isomerase | - |
| QN090_RS23910 (QN090_23910) | 6533..6979 | - | 447 | WP_004193264.1 | DUF421 domain-containing protein | - |
| QN090_RS23915 (QN090_23915) | 6989..7492 | - | 504 | WP_004193267.1 | hypothetical protein | - |
| QN090_RS23920 (QN090_23920) | 7624..8016 | + | 393 | WP_004193269.1 | YdeI family stress tolerance OB fold protein | - |
| QN090_RS23925 (QN090_23925) | 8317..9960 | + | 1644 | WP_004193272.1 | ABC transporter substrate-binding protein SapA | - |
| QN090_RS23930 (QN090_23930) | 9957..10922 | + | 966 | WP_004193276.1 | peptide ABC transporter permease SapB | - |
| QN090_RS23935 (QN090_23935) | 10909..11367 | + | 459 | Protein_16 | peptide ABC transporter permease | - |
| QN090_RS23940 (QN090_23940) | 11598..13139 | - | 1542 | WP_000050481.1 | IS91 family transposase ISVsa3 | Transposase |
| QN090_RS23945 (QN090_23945) | 13544..14383 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QN090_RS23950 (QN090_23950) | 14377..14724 | - | 348 | WP_000679427.1 | Multidrug transporter EmrE | ARG |
| QN090_RS23955 (QN090_23955) | 14947..15399 | - | 453 | WP_001749986.1 | hypothetical protein | ARG |
| QN090_RS23960 (QN090_23960) | 15484..16116 | - | 633 | WP_000186237.1 | Chloramphenicol acetyltransferase | VF |
| QN090_RS23965 (QN090_23965) | 16254..17084 | - | 831 | WP_001334766.1 | Beta-lactamase OXA-1 | ARG |
| QN090_RS23970 (QN090_23970) | 17215..17769 | - | 555 | WP_063840321.1 | Aminoglycoside N(6')-acetyltransferase type 1 | ARG |
| QN090_RS23975 (QN090_23975) | 18061..19074 | + | 1014 | WP_000845048.1 | IS91 family transposase ISAzo26 | Transposase |
| QN090_RS23980 (QN090_23980) | 19276..19626 | + | 351 | WP_000454193.1 | DUF3330 domain-containing protein | - |
| QN090_RS23985 (QN090_23985) | 19802..20362 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| QN090_RS23990 (QN090_23990) | 20366..23332 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QN090_RS23995 (QN090_23995) | 23365..23598 | - | 234 | Protein_28 | transposase | - |
| QN090_RS24000 (QN090_24000) | 24180..24566 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
| QN090_RS24005 (QN090_24005) | 24706..25674 | - | 969 | WP_030005799.1 | IS5 family transposase IS903B | Transposase |
| QN090_RS24010 (QN090_24010) | 27077..27385 | - | 309 | Protein_31 | replication initiation protein | - |
| QN090_RS24020 (QN090_24020) | 28244..29731 | - | 1488 | Protein_33 | group II intron reverse transcriptase/maturase | - |
| QN090_RS24025 (QN090_24025) | 30137..30568 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QN090_RS24030 (QN090_24030) | 30568..31839 | + | 1272 | WP_001754953.1 | Y-family DNA polymerase | - |
| QN090_RS24035 (QN090_24035) | 31921..32895 | - | 975 | WP_000064119.1 | ParB family protein | - |
| QN090_RS24040 (QN090_24040) | 32895..34100 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| QN090_RS24045 (QN090_24045) | 34515..34784 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| QN090_RS24050 (QN090_24050) | 34961..35827 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| QN090_RS24055 (QN090_24055) | 36357..36461 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| QN090_RS24060 (QN090_24060) | 36590..36847 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| QN090_RS24065 (QN090_24065) | 36905..37681 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| QN090_RS24070 (QN090_24070) | 37678..38421 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| QN090_RS24075 (QN090_24075) | 38472..38822 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| QN090_RS24080 (QN090_24080) | 39396..39626 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QN090_RS24085 (QN090_24085) | 39623..40039 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QN090_RS24090 (QN090_24090) | 40243..41099 | + | 857 | Protein_47 | IS3 family transposase ISEc15 | Transposase |
| QN090_RS24095 (QN090_24095) | 41381..42457 | + | 1077 | WP_000227969.1 | IS110 family transposase ISEc21 | Transposase |
| QN090_RS24100 (QN090_24100) | 43098..43181 | + | 84 | Protein_49 | SOS response-associated peptidase | - |
| QN090_RS24105 (QN090_24105) | 43239..43310 | - | 72 | Protein_50 | hypothetical protein | - |
| QN090_RS24110 (QN090_24110) | 43344..43865 | - | 522 | Protein_51 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QN090_RS24115 (QN090_24115) | 43933..44637 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN090_RS24120 (QN090_24120) | 44759..45664 | + | 906 | WP_000219391.1 | hypothetical protein | ARG |
| QN090_RS24125 (QN090_24125) | 45661..46899 | + | 1239 | WP_000004159.1 | macrolide resistance MFS transporter Mrx(A) | - |
| QN090_RS24130 (QN090_24130) | 46899..47483 | + | 585 | WP_001137892.1 | macrolide-binding transcriptional repressor MphR(A) | - |
| QN090_RS24135 (QN090_24135) | 47976..48740 | - | 765 | WP_001389365.1 | IS6 family transposase IS6100 | Transposase |
| QN090_RS24140 (QN090_24140) | 48858..48923 | - | 66 | Protein_57 | EAL domain-containing protein | - |
| QN090_RS24145 (QN090_24145) | 48967..49272 | - | 306 | WP_000130000.1 | Transcriptional regulator | Relaxase |
| QN090_RS24150 (QN090_24150) | 49283..50488 | - | 1206 | WP_000184001.1 | chromate efflux transporter | - |
| QN090_RS24155 (QN090_24155) | 50644..50847 | - | 204 | WP_000376616.1 | hypothetical protein | - |
| QN090_RS24160 (QN090_24160) | 50975..51814 | - | 840 | WP_000259031.1 | Dihydropteroate synthase | ARG |
| QN090_RS24165 (QN090_24165) | 51808..52143 | - | 336 | WP_052238321.1 | SMR family transporter | - |
| QN090_RS24170 (QN090_24170) | 52036..52401 | + | 366 | WP_025999322.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| QN090_RS24175 (QN090_24175) | 52405..53280 | - | 876 | WP_004193231.1 | LysR family transcriptional regulator AmpR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|