MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 85737 bp
Accession: NZ_CP126330 Location: 1..85737 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHA
Accession: NZ_CP126330 Location: 1..85737 Organism: Citrobacter braakii strain THB2 Replicon: plasmid pTHA
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN090_RS22730 (QN090_22730) | 16..678 | + | 663 | WP_000958205.1 | hypothetical protein | VF |
| QN090_RS22735 (QN090_22735) | 689..988 | + | 300 | WP_000175462.1 | TrbC/VirB2 family protein | - |
| QN090_RS22740 (QN090_22740) | 998..3748 | + | 2751 | WP_000153996.1 | Type IV secretion system protein virB4 | VF |
| QN090_RS22745 (QN090_22745) | 3767..4483 | + | 717 | WP_000770034.1 | type IV secretion system protein | - |
| QN090_RS22750 (QN090_22750) | 4495..4779 | + | 285 | WP_000769859.1 | EexN family lipoprotein | - |
| QN090_RS22755 (QN090_22755) | 4797..5804 | + | 1008 | WP_000014166.1 | type IV secretion system protein | - |
| QN090_RS22760 (QN090_22760) | 5881..6021 | + | 141 | WP_000873539.1 | hypothetical protein | - |
| QN090_RS22765 (QN090_22765) | 6014..6700 | + | 687 | WP_001293055.1 | type IV secretion system protein | - |
| QN090_RS22770 (QN090_22770) | 6693..7586 | + | 894 | WP_001045307.1 | P-type conjugative transfer protein VirB9 | - |
| QN090_RS22775 (QN090_22775) | 7583..8779 | + | 1197 | WP_000980841.1 | hypothetical protein | VF |
| QN090_RS22780 (QN090_22780) | 8783..9832 | + | 1050 | WP_000342114.1 | Type IV secretion system protein VirB11 | VF |
| QN090_RS22785 (QN090_22785) | 9819..10220 | + | 402 | WP_000979494.1 | cag pathogenicity island Cag12 family protein | - |
| QN090_RS22790 (QN090_22790) | 10311..10628 | + | 318 | WP_000683352.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QN090_RS22795 (QN090_22795) | 10655..10990 | + | 336 | WP_000610141.1 | hypothetical protein | - |
| QN090_RS22800 (QN090_22800) | 10966..11274 | + | 309 | WP_000212005.1 | hypothetical protein | - |
| QN090_RS22805 (QN090_22805) | 11271..13472 | + | 2202 | WP_001241818.1 | type IA DNA topoisomerase | - |
| QN090_RS22810 (QN090_22810) | 13469..13861 | + | 393 | WP_001079960.1 | H-NS family nucleoid-associated regulatory protein | - |
| QN090_RS22815 (QN090_22815) | 14570..16477 | + | 1908 | WP_000575554.1 | type IV secretion system DNA-binding domain-containing protein | - |
| QN090_RS22820 (QN090_22820) | 16492..17238 | + | 747 | WP_000909125.1 | MobC family replication-relaxation protein | - |
| QN090_RS22825 (QN090_22825) | 17231..17758 | + | 528 | WP_001232861.1 | Cardiolipin synthase B | VF |
| QN090_RS22830 (QN090_22830) | 17790..18221 | - | 432 | WP_001531161.1 | hypothetical protein | - |
| QN090_RS22835 (QN090_22835) | 18353..18529 | - | 177 | WP_013438824.1 | hypothetical protein | - |
| QN090_RS22840 (QN090_22840) | 18701..19666 | - | 966 | WP_000178515.1 | zincin-like metallopeptidase domain-containing protein | - |
| QN090_RS22845 (QN090_22845) | 20121..21341 | - | 1221 | Protein_24 | ISL3 family transposase ISKox3 | Transposase |
| QN090_RS22850 (QN090_22850) | 21442..21867 | + | 426 | WP_000668788.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QN090_RS22855 (QN090_22855) | 21867..23138 | + | 1272 | WP_000457544.1 | Y-family DNA polymerase | - |
| QN090_RS22860 (QN090_22860) | 23217..23468 | + | 252 | WP_000181753.1 | hypothetical protein | - |
| QN090_RS22865 (QN090_22865) | 23522..23827 | + | 306 | WP_000534920.1 | hypothetical protein | - |
| QN090_RS22870 (QN090_22870) | 24904..25875 | - | 972 | WP_000817037.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| QN090_RS22875 (QN090_22875) | 25875..27041 | - | 1167 | WP_000523812.1 | hypothetical protein | VF |
| QN090_RS22880 (QN090_22880) | 27782..28792 | + | 1011 | WP_000200069.1 | RepB family plasmid replication initiator protein | - |
| QN090_RS22885 (QN090_22885) | 29604..29927 | - | 324 | Protein_32 | lipocalin family protein | - |
| QN090_RS22890 (QN090_22890) | 30045..30770 | + | 726 | WP_000331736.1 | IS607 family transposase ISAfe11 | Transposase |
| QN090_RS22895 (QN090_22895) | 30870..31280 | + | 411 | WP_000750474.1 | hydroxyisourate hydrolase | - |
| QN090_RS22900 (QN090_22900) | 31383..32342 | + | 960 | WP_000208727.1 | DUF523 and DUF1722 domain-containing protein | - |
| QN090_RS22905 (QN090_22905) | 32488..33576 | + | 1089 | WP_000633445.1 | AAA family ATPase | - |
| QN090_RS22910 (QN090_22910) | 33639..34343 | - | 705 | WP_001067852.1 | IS6 family transposase IS26 | Transposase |
| QN090_RS22915 (QN090_22915) | 34607..35680 | - | 1074 | WP_000557466.1 | hypothetical protein | - |
| QN090_RS22920 (QN090_22920) | 35724..35873 | - | 150 | WP_000550473.1 | hypothetical protein | - |
| QN090_RS22925 (QN090_22925) | 36080..36190 | - | 111 | Protein_40 | protein YdfV | - |
| QN090_RS22930 (QN090_22930) | 36215..36454 | + | 240 | WP_000534857.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| QN090_RS22935 (QN090_22935) | 36454..36741 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| QN090_RS22940 (QN090_22940) | 37045..37827 | - | 783 | WP_001531258.1 | IS21 family transposase ISSen3 | Transposase |
| QN090_RS22945 (QN090_22945) | 37824..38846 | - | 1023 | WP_000627495.1 | IS21 family transposase ISSen3 | Transposase |
| QN090_RS22950 (QN090_22950) | 38985..39209 | + | 225 | Protein_45 | hypothetical protein | - |
| QN090_RS22955 (QN090_22955) | 39646..41853 | + | 2208 | WP_001162839.1 | AAA family ATPase | - |
| QN090_RS22960 (QN090_22960) | 41856..44438 | + | 2583 | WP_000449742.1 | nuclease domain-containing protein | - |
| QN090_RS22970 (QN090_22970) | 46110..47087 | - | 978 | WP_000600827.1 | IS91 family transposase ISWz1 | Transposase |
| QN090_RS22975 (QN090_22975) | 47279..47636 | + | 358 | Protein_50 | IS1 family transposase | - |
| QN090_RS22980 (QN090_22980) | 48159..48929 | - | 771 | Protein_51 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QN090_RS22985 (QN090_22985) | 49036..49137 | - | 102 | Protein_52 | hypothetical protein | - |
| QN090_RS22990 (QN090_22990) | 49172..52144 | - | 2973 | WP_001138073.1 | Tn3 family transposase TnpA_TnAs3 | Transposase |
| QN090_RS22995 (QN090_22995) | 52147..52704 | - | 558 | WP_001162012.1 | Tn3 family transposase TnpR_TnAs2 | Transposase |
| QN090_RS23000 (QN090_23000) | 53010..54023 | - | 1014 | WP_000845054.1 | IS91 family transposase ISAzo26 | Transposase |
| QN090_RS23005 (QN090_23005) | 54168..54665 | + | 498 | WP_001083725.1 | IS1595 family transposase ISSsu9 | ARG |
| QN090_RS23010 (QN090_23010) | 54777..55067 | + | 291 | WP_001336345.1 | DUF1010 domain-containing protein | - |
| QN090_RS23015 (QN090_23015) | 55073..55911 | + | 839 | Protein_58 | Streptomycin 3''-adenylyltransferase | ARG |
| QN090_RS23020 (QN090_23020) | 56011..56097 | + | 87 | Protein_59 | hypothetical protein | - |
| QN090_RS23025 (QN090_23025) | 56426..57625 | - | 1200 | WP_015344972.1 | IS91 family transposase ISVa3 | Transposase |
| QN090_RS23030 (QN090_23030) | 57792..58184 | + | 393 | WP_004193041.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| QN090_RS23035 (QN090_23035) | 58504..58908 | - | 405 | WP_064732565.1 | bleomycin binding protein | - |
| QN090_RS23040 (QN090_23040) | 58918..59622 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| QN090_RS23045 (QN090_23045) | 59736..60512 | + | 777 | WP_001199192.1 | SPbeta prophage-derived aminoglycoside N(3')-acetyltransferase-like protein YokD | ARG |
| QN090_RS23050 (QN090_23050) | 60741..61765 | + | 1025 | Protein_65 | Hygromycin-B 4-O-kinase | ARG |
| QN090_RS23055 (QN090_23055) | 61840..62127 | + | 288 | Protein_66 | AAC(3) family N-acetyltransferase | - |
| QN090_RS23060 (QN090_23060) | 62187..62939 | - | 753 | WP_000602738.1 | IS6 family transposase ISRle7 | Transposase |
| QN090_RS23065 (QN090_23065) | 63001..64524 | + | 1524 | Protein_68 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QN090_RS23070 (QN090_23070) | 64584..64712 | + | 129 | WP_032073144.1 | hypothetical protein | - |
| QN090_RS23075 (QN090_23075) | 64750..65235 | + | 486 | WP_006581703.1 | hypothetical protein | - |
| QN090_RS23085 (QN090_23085) | 66612..67427 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QN090_RS23090 (QN090_23090) | 67514..67756 | + | 243 | Protein_73 | phosphoglucosamine mutase | - |
| QN090_RS23095 (QN090_23095) | 67992..69485 | - | 1494 | WP_015344975.1 | IS91 family transposase ISVsa3 | Transposase |
| QN090_RS23100 (QN090_23100) | 69597..69902 | - | 306 | WP_001255015.1 | HTH-type transcriptional regulator HdfR | VF |
| QN090_RS23105 (QN090_23105) | 69930..71144 | - | 1215 | WP_000214122.1 | Bicyclomycin resistance protein | ARG |
| QN090_RS23110 (QN090_23110) | 71361..72245 | - | 885 | WP_001447541.1 | DUF3363 domain-containing protein | - |
| QN090_RS23115 (QN090_23115) | 72276..72920 | - | 645 | WP_002011539.1 | IS91 family transposase | - |
| QN090_RS23120 (QN090_23120) | 72866..73768 | - | 903 | WP_247784763.1 | IS91 family transposase ISVsa3 | Transposase |
| QN090_RS23125 (QN090_23125) | 73979..74203 | - | 225 | WP_000743213.1 | hypothetical protein | - |
| QN090_RS23130 (QN090_23130) | 74200..74937 | - | 738 | WP_001446887.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| QN090_RS23135 (QN090_23135) | 75423..75563 | - | 141 | WP_001044210.1 | hypothetical protein | - |
| QN090_RS23140 (QN090_23140) | 75569..76273 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN090_RS23145 (QN090_23145) | 76320..76928 | - | 609 | WP_023352616.1 | Tetracycline repressor protein class H | VF |
| QN090_RS23150 (QN090_23150) | 77024..78208 | + | 1185 | WP_001039466.1 | Tetracycline resistance protein, class B | ARG |
| QN090_RS23155 (QN090_23155) | 78303..79412 | + | 1110 | WP_000842134.1 | S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | - |
| QN090_RS23160 (QN090_23160) | 79434..79856 | + | 423 | Protein_87 | alpha/beta hydrolase-fold protein | - |
| QN090_RS23165 (QN090_23165) | 79902..80606 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QN090_RS23170 (QN090_23170) | 80823..82541 | - | 1719 | WP_000739198.1 | hybrid sensor histidine kinase/response regulator | - |
| QN090_RS23175 (QN090_23175) | 82538..83026 | - | 489 | WP_000238872.1 | molybdopterin-dependent oxidoreductase | - |
| QN090_RS23180 (QN090_23180) | 83019..84002 | - | 984 | WP_001245143.1 | hypothetical protein | - |
| QN090_RS23185 (QN090_23185) | 84006..84920 | - | 915 | WP_000891983.1 | helix-turn-helix domain-containing protein | - |
| QN090_RS23190 (QN090_23190) | 85234..85542 | + | 309 | WP_000062770.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|