MGE detailed information
MGE type: Genomic_island MGE length: 36370 bp
Accession: NZ_CP126325 Location: 3646037..3682406 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Accession: NZ_CP126325 Location: 3646037..3682406 Organism: Salmonella enterica subsp. enterica strain HL21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN088_RS17805 () | 3641599..3644043 | + | 2445 | WP_000973041.1 | acyl-CoA dehydrogenase FadE | - |
| QN088_RS17810 () | 3644152..3644919 | + | 768 | WP_000015789.1 | amidohydrolase | - |
| QN088_RS17815 () | 3645290..3645697 | + | 408 | WP_000788200.1 | Spy/CpxP family protein refolding chaperone | - |
| QN088_RS17820 () | 3646037..3646756 | + | 720 | WP_000787602.1 | adhesin/invasin protein PagN | - |
| QN088_RS17825 () | 3646760..3646975 | - | 216 | WP_053445585.1 | hypothetical protein | - |
| QN088_RS17830 () | 3647095..3648042 | - | 948 | WP_000970302.1 | LysR family transcriptional regulator | - |
| QN088_RS17835 () | 3648536..3648776 | - | 241 | Protein_3487 | PerC family transcriptional regulator | - |
| QN088_RS17840 () | 3648859..3649680 | - | 822 | WP_000119389.1 | polysaccharide deacetylase family protein | - |
| QN088_RS17845 () | 3650088..3650558 | - | 471 | WP_023243481.1 | AfaD family invasin | - |
| QN088_RS17850 () | 3650580..3653090 | - | 2511 | WP_284546040.1 | F1 capsule-anchoring protein | VF |
| QN088_RS17855 () | 3653114..3653854 | - | 741 | WP_284546041.1 | Chaperone protein caf1M | VF |
| QN088_RS17860 () | 3653929..3654426 | - | 498 | WP_284546042.1 | Saf-pilin pilus formation protein SafA | - |
| QN088_RS17865 () | 3654559..3655053 | - | 495 | WP_023228257.1 | Saf-pilin pilus formation protein SafA | - |
| QN088_RS17870 () | 3655821..3656522 | - | 702 | Protein_3494 | integrase core domain-containing protein | - |
| QN088_RS17875 () | 3656575..3656805 | + | 231 | Protein_3495 | SymE family type I addiction module toxin | - |
| QN088_RS17880 () | 3656956..3657234 | - | 279 | WP_077911363.1 | hypothetical protein | - |
| QN088_RS17885 () | 3657551..3658018 | - | 468 | WP_000828173.1 | sugar tyrosine-protein kinase | - |
| QN088_RS17890 () | 3658891..3659124 | - | 234 | WP_124084119.1 | hypothetical protein | - |
| - | 3659301..3659723 | - | 423 | - | - | Antitoxin Detail |
| QN088_RS17895 () | 3659458..3659733 | + | 276 | WP_000994227.1 | SymE family type I addiction module toxin | Toxin Detail |
| QN088_RS17900 () | 3659781..3660212 | - | 432 | WP_000778566.1 | hypothetical protein | - |
| QN088_RS17905 () | 3660214..3664890 | - | 4677 | WP_284546043.1 | RHS repeat-associated core domain-containing protein | - |
| QN088_RS17910 () | 3664906..3665364 | - | 459 | WP_000186514.1 | DcrB-related protein | - |
| QN088_RS17915 () | 3665424..3667658 | - | 2235 | WP_284546044.1 | hypothetical protein | VF |
| QN088_RS17920 () | 3668055..3668576 | - | 522 | WP_000968384.1 | DUF2778 domain-containing protein | - |
| QN088_RS17925 () | 3668600..3669016 | - | 417 | WP_154023623.1 | DUF2195 family protein | - |
| QN088_RS17930 () | 3669013..3669108 | - | 96 | Protein_3506 | hypothetical protein | - |
| QN088_RS17935 () | 3669144..3669605 | - | 462 | WP_001674711.1 | hypothetical protein | - |
| QN088_RS17940 () | 3669590..3670060 | - | 471 | WP_000528843.1 | glucosaminidase domain-containing protein | - |
| QN088_RS17945 () | 3670103..3670870 | - | 768 | WP_001254127.1 | TagF domain-containing protein | - |
| QN088_RS17950 () | 3670870..3674739 | - | 3870 | WP_080087243.1 | hypothetical protein | VF |
| QN088_RS17955 () | 3674773..3675204 | - | 432 | WP_000227044.1 | Shiga toxin A subunit | - |
| QN088_RS17960 () | 3675407..3676180 | - | 774 | WP_000976547.1 | Rap1a/Tai family immunity protein | - |
| QN088_RS17965 () | 3676185..3677489 | - | 1305 | WP_000132483.1 | Peptidoglycan-associated lipoprotein | VF |
| QN088_RS17970 () | 3677486..3678829 | - | 1344 | WP_000118732.1 | hypothetical protein | VF |
| QN088_RS17975 () | 3678833..3679369 | - | 537 | WP_001007104.1 | hypothetical protein | VF |
| QN088_RS17980 () | 3679436..3679921 | - | 486 | WP_284546045.1 | Protein hcp1 | VF |
| QN088_RS17985 () | 3680064..3680447 | - | 384 | WP_000379146.1 | type VI secretion system amidase immunity protein Tai4 | - |
| QN088_RS17990 () | 3680432..3680917 | - | 486 | WP_001081550.1 | T6SS effector amidase Tae4 family protein | - |
| QN088_RS17995 () | 3680960..3681153 | - | 194 | Protein_3519 | type VI secretion system lipoprotein TssJ | - |
| QN088_RS18000 () | 3681221..3681706 | - | 486 | WP_000312802.1 | Protein hcp1 | VF |
| QN088_RS18005 () | 3681960..3682292 | - | 333 | WP_077906609.1 | hypothetical protein | - |
| QN088_RS18010 () | 3682419..3682529 | - | 111 | WP_010988967.1 | BPSL0067 family protein | - |
| QN088_RS18015 () | 3682592..3684100 | - | 1509 | WP_000013884.1 | type VI secretion system contractile sheath large subunit | - |
| QN088_RS18020 () | 3684124..3684666 | - | 543 | WP_000996818.1 | type VI secretion system contractile sheath small subunit | - |
| QN088_RS18025 () | 3684766..3687405 | - | 2640 | WP_284546046.1 | type VI secretion system ATPase TssH | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|