MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 86649 bp
Accession: NZ_CP126324 Location: 1..86649 Organism: Salmonella enterica subsp. enterica strain CY16 Replicon: plasmid pCY16A
Accession: NZ_CP126324 Location: 1..86649 Organism: Salmonella enterica subsp. enterica strain CY16 Replicon: plasmid pCY16A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QN087_RS22755 (QN087_22755) | 207..947 | + | 741 | WP_000177627.1 | conjugal transfer pilus acetylase TraX | - |
| QN087_RS22760 (QN087_22760) | 1002..1565 | + | 564 | WP_000129019.1 | fertility inhibition protein FinO | - |
| QN087_RS22765 (QN087_22765) | 1682..1963 | + | 282 | Protein_3 | disulfide bond formation protein DsbA | - |
| QN087_RS22770 (QN087_22770) | 2244..2810 | + | 567 | Protein_4 | phospholipase D family protein | - |
| QN087_RS22775 (QN087_22775) | 2921..3187 | + | 267 | WP_001576653.1 | replication regulatory protein RepA | - |
| QN087_RS22780 (QN087_22780) | 3435..3512 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| QN087_RS22785 (QN087_22785) | 3493..4374 | + | 882 | WP_001746973.1 | incFII family plasmid replication initiator RepA | - |
| QN087_RS22790 (QN087_22790) | 5169..5573 | - | 405 | Protein_8 | IS66 family transposase zinc-finger binding domain-containing protein | - |
| QN087_RS22795 (QN087_22795) | 5565..5779 | - | 215 | Protein_9 | IS66 family transposase ISEc8 | Transposase |
| QN087_RS22800 (QN087_22800) | 5934..6131 | - | 198 | WP_001675602.1 | transposase | - |
| QN087_RS22805 (QN087_22805) | 6298..7029 | - | 732 | WP_001746755.1 | hypothetical protein | - |
| QN087_RS22810 (QN087_22810) | 7257..7916 | - | 660 | WP_001575507.1 | hypothetical protein | - |
| QN087_RS22815 (QN087_22815) | 9375..9647 | + | 273 | WP_001178538.1 | hypothetical protein | - |
| QN087_RS22820 (QN087_22820) | 9883..10680 | + | 798 | WP_000704722.1 | hypothetical protein | VF |
| QN087_RS22825 (QN087_22825) | 10708..11472 | + | 765 | WP_001746754.1 | hypothetical protein | VF |
| QN087_RS22830 (QN087_22830) | 11459..11734 | + | 276 | WP_001020576.1 | hypothetical protein | - |
| QN087_RS22835 (QN087_22835) | 11734..12588 | + | 855 | WP_001746753.1 | hypothetical protein | VF |
| QN087_RS22840 (QN087_22840) | 12549..13133 | + | 585 | WP_024138406.1 | hypothetical protein | - |
| QN087_RS22845 (QN087_22845) | 13206..13418 | + | 213 | WP_000063791.1 | hypothetical protein | VF |
| QN087_RS22850 (QN087_22850) | 13679..13840 | + | 162 | WP_001816720.1 | hypothetical protein | - |
| QN087_RS22855 (QN087_22855) | 13866..14714 | + | 849 | WP_000175397.1 | SdiA-regulated domain-containing protein | - |
| QN087_RS22860 (QN087_22860) | 15284..15712 | - | 429 | WP_001746752.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QN087_RS22865 (QN087_22865) | 15709..15939 | - | 231 | WP_001261283.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QN087_RS22870 (QN087_22870) | 16684..16902 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| QN087_RS22875 (QN087_22875) | 16904..17209 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| QN087_RS22880 (QN087_22880) | 17211..17501 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| QN087_RS22885 (QN087_22885) | 17498..18019 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| QN087_RS22890 (QN087_22890) | 18054..18836 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| QN087_RS22895 (QN087_22895) | 18845..19396 | + | 552 | WP_015059439.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
| QN087_RS22900 (QN087_22900) | 19583..20071 | + | 489 | WP_001075507.1 | CaiF/GrlA family transcriptional regulator | - |
| QN087_RS22905 (QN087_22905) | 20065..20550 | + | 486 | WP_000905606.1 | membrane protein | - |
| QN087_RS22910 (QN087_22910) | 20827..21114 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| QN087_RS22915 (QN087_22915) | 21270..21830 | + | 561 | WP_071785580.1 | Invasin | VF |
| QN087_RS22920 (QN087_22920) | 21897..22247 | - | 351 | WP_001746584.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| QN087_RS22925 (QN087_22925) | 22304..22731 | + | 428 | Protein_35 | IS200/IS605 family transposase | - |
| QN087_RS22930 (QN087_22930) | 22858..23508 | - | 651 | WP_001746582.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| QN087_RS22935 (QN087_22935) | 23769..24494 | - | 726 | WP_001746581.1 | MAPK phosphothreonine lyase | VF |
| QN087_RS22940 (QN087_22940) | 24775..26550 | - | 1776 | WP_001746580.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| QN087_RS22945 (QN087_22945) | 26602..26769 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| QN087_RS22950 (QN087_22950) | 26732..27499 | - | 768 | WP_001541537.1 | virulence protein SpvA | - |
| QN087_RS22955 (QN087_22955) | 27673..27837 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| QN087_RS22960 (QN087_22960) | 28011..28904 | - | 894 | WP_001746579.1 | virulence genes transcriptional activator SpvR | - |
| QN087_RS22965 (QN087_22965) | 29512..30549 | + | 1038 | WP_001121399.1 | IS630 family transposase ISEc33 | Transposase |
| QN087_RS22970 (QN087_22970) | 30738..31763 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| QN087_RS22975 (QN087_22975) | 31696..33360 | - | 1665 | WP_000098783.1 | IS481 family transposase ISAzs36 | Transposase |
| QN087_RS22980 (QN087_22980) | 33344..33904 | - | 561 | WP_001240331.1 | Tn3 family transposase ISPsy42 | Transposase |
| QN087_RS22985 (QN087_22985) | 34111..34851 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| QN087_RS22990 (QN087_22990) | 35506..35994 | - | 489 | WP_001746759.1 | hypothetical protein | - |
| QN087_RS22995 (QN087_22995) | 36253..37368 | + | 1116 | WP_015059463.1 | DNA-binding protein | - |
| QN087_RS23000 (QN087_23000) | 37454..37870 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| QN087_RS23005 (QN087_23005) | 37973..38389 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| QN087_RS23010 (QN087_23010) | 38446..39047 | + | 602 | Protein_52 | DUF2913 family protein | - |
| QN087_RS23015 (QN087_23015) | 39044..39985 | - | 942 | WP_000728917.1 | ISNCY family transposase ISSen7 | VF |
| QN087_RS23020 (QN087_23020) | 40400..41605 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| QN087_RS23025 (QN087_23025) | 41605..42579 | + | 975 | WP_000064276.1 | ParB family protein | - |
| QN087_RS23030 (QN087_23030) | 42661..43935 | - | 1275 | WP_015059462.1 | Y-family DNA polymerase | - |
| QN087_RS23035 (QN087_23035) | 43935..44357 | - | 423 | WP_001746750.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QN087_RS23040 (QN087_23040) | 44868..45338 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| QN087_RS23045 (QN087_23045) | 45331..45687 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| QN087_RS23050 (QN087_23050) | 45625..45906 | - | 282 | WP_146671468.1 | hypothetical protein | - |
| QN087_RS23055 (QN087_23055) | 46069..46749 | + | 681 | WP_001747300.1 | DNA methylase | - |
| QN087_RS23060 (QN087_23060) | 46749..46970 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| QN087_RS23065 (QN087_23065) | 47026..47439 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| QN087_RS23070 (QN087_23070) | 47511..48275 | + | 765 | WP_001747302.1 | hypothetical protein | - |
| QN087_RS23075 (QN087_23075) | 48771..49205 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| QN087_RS23080 (QN087_23080) | 49272..49706 | + | 435 | WP_001747303.1 | DUF1380 family protein | - |
| QN087_RS23085 (QN087_23085) | 49942..50265 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| QN087_RS23090 (QN087_23090) | 50229..50450 | + | 222 | WP_144417565.1 | hypothetical protein | - |
| QN087_RS23095 (QN087_23095) | 51044..51358 | + | 315 | Protein_69 | single-stranded DNA-binding protein SSB2 | - |
| QN087_RS23100 (QN087_23100) | 51360..51500 | + | 141 | Protein_70 | DUF905 family protein | - |
| QN087_RS23105 (QN087_23105) | 51569..53552 | + | 1984 | Protein_71 | ParB/RepB/Spo0J family partition protein | - |
| QN087_RS23110 (QN087_23110) | 53592..53726 | + | 135 | Protein_72 | conjugation system SOS inhibitor PsiB family protein | - |
| QN087_RS23115 (QN087_23115) | 53720..54376 | + | 657 | Protein_73 | plasmid SOS inhibition protein A | - |
| QN087_RS23120 (QN087_23120) | 54411..54539 | + | 129 | WP_001746558.1 | hypothetical protein | - |
| QN087_RS23125 (QN087_23125) | 54625..54783 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| QN087_RS23130 (QN087_23130) | 54886..55704 | + | 819 | Protein_76 | DUF932 domain-containing protein | - |
| QN087_RS23135 (QN087_23135) | 56015..56485 | - | 471 | WP_024134052.1 | hypothetical protein | VF |
| QN087_RS23140 (QN087_23140) | 56908..57288 | + | 381 | WP_001151568.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QN087_RS23145 (QN087_23145) | 57483..58172 | + | 690 | WP_001746563.1 | conjugal transfer transcriptional regulator TraJ | - |
| QN087_RS23150 (QN087_23150) | 58265..58666 | + | 402 | WP_032490308.1 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| QN087_RS23155 (QN087_23155) | 58708..59070 | + | 363 | WP_001274202.1 | type IV conjugative transfer system pilin TraA | - |
| QN087_RS23160 (QN087_23160) | 59085..59396 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| QN087_RS23165 (QN087_23165) | 59418..59984 | + | 567 | WP_000399760.1 | type IV conjugative transfer system protein TraE | - |
| QN087_RS23170 (QN087_23170) | 59971..60711 | + | 741 | WP_015059453.1 | type-F conjugative transfer system secretin TraK | - |
| QN087_RS23175 (QN087_23175) | 60711..62132 | + | 1422 | WP_000146698.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QN087_RS23180 (QN087_23180) | 62122..62718 | + | 597 | WP_000527898.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QN087_RS23185 (QN087_23185) | 62696..62920 | + | 225 | WP_001746950.1 | DUF2689 domain-containing protein | - |
| QN087_RS23190 (QN087_23190) | 62917..63432 | + | 516 | WP_001746951.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QN087_RS23195 (QN087_23195) | 63567..63788 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| QN087_RS23200 (QN087_23200) | 63781..64248 | + | 468 | WP_000549559.1 | hypothetical protein | - |
| QN087_RS23205 (QN087_23205) | 64245..64628 | + | 384 | WP_000870325.1 | hypothetical protein | - |
| QN087_RS23210 (QN087_23210) | 64644..67291 | + | 2648 | Protein_92 | type IV secretion system protein TraC | - |
| QN087_RS23215 (QN087_23215) | 67266..67652 | + | 387 | WP_000102756.1 | type-F conjugative transfer system protein TrbI | - |
| QN087_RS23220 (QN087_23220) | 67649..68281 | + | 633 | WP_015059451.1 | type-F conjugative transfer system protein TraW | - |
| QN087_RS23225 (QN087_23225) | 68278..69270 | + | 993 | WP_015059450.1 | conjugal transfer pilus assembly protein TraU | - |
| QN087_RS23230 (QN087_23230) | 69289..69597 | + | 309 | WP_001576663.1 | hypothetical protein | - |
| QN087_RS23235 (QN087_23235) | 69582..70220 | + | 639 | WP_001576661.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QN087_RS23240 (QN087_23240) | 70257..70676 | + | 420 | WP_001229398.1 | HNH endonuclease | - |
| QN087_RS23245 (QN087_23245) | 70673..72499 | + | 1827 | WP_001746541.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QN087_RS23250 (QN087_23250) | 72510..72986 | + | 477 | WP_001746543.1 | hypothetical protein | - |
| QN087_RS23255 (QN087_23255) | 72997..73212 | + | 216 | WP_001746544.1 | conjugal transfer protein TrbE | - |
| QN087_RS23260 (QN087_23260) | 73225..73968 | + | 744 | WP_001746545.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QN087_RS23265 (QN087_23265) | 74182..74475 | + | 294 | WP_001233883.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QN087_RS23270 (QN087_23270) | 74462..75010 | + | 549 | WP_000055842.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QN087_RS23275 (QN087_23275) | 75000..76271 | + | 1272 | Protein_105 | conjugal transfer pilus assembly protein TraH | - |
| QN087_RS23280 (QN087_23280) | 77508..77990 | + | 483 | WP_000787664.1 | hypothetical protein | - |
| QN087_RS23285 (QN087_23285) | 78236..78967 | + | 732 | WP_000850404.1 | conjugal transfer complement resistance protein TraT | - |
| QN087_RS23290 (QN087_23290) | 79344..81578 | + | 2235 | WP_001747308.1 | type IV conjugative transfer system coupling protein TraD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|