MGE detailed information
MGE type: Genomic_island MGE length: 49803 bp
Accession: NZ_CP126166 Location: 4537790..4587592 Organism: Salmonella enterica subsp. enterica strain CRSE-01 Replicon: chromosome
Accession: NZ_CP126166 Location: 4537790..4587592 Organism: Salmonella enterica subsp. enterica strain CRSE-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NED09_RS22220 (4532842) | 4532842..4533360 | + | 519 | WP_000227928.1 | bifunctional 3-hydroxydecanoyl-ACP dehydratase/trans-2-decenoyl-ACP isomerase | - |
| NED09_RS22225 (4533460) | 4533460..4533627 | - | 168 | WP_001537784.1 | ribosome modulation factor | - |
| NED09_RS22230 (4533883) | 4533883..4534434 | - | 552 | WP_284582422.1 | membrane integrity-associated transporter subunit PqiC | - |
| NED09_RS22235 (4534444) | 4534444..4535148 | - | 705 | WP_023327680.1 | IS6-like element IS26 family transposase | - |
| NED09_RS22240 (4535211) | 4535211..4535900 | - | 690 | Protein_4327 | type IV secretion system protein VirB10 | - |
| NED09_RS22245 (4535897) | 4535897..4536826 | - | 930 | WP_000783380.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| NED09_RS22250 (4536831) | 4536831..4537544 | - | 714 | WP_000394613.1 | type IV secretion system protein | - |
| NED09_RS22255 (4537790) | 4537790..4538923 | - | 1134 | WP_000513461.1 | type IV secretion system protein | - |
| NED09_RS22260 (4538933) | 4538933..4539160 | - | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| NED09_RS22265 (4539161) | 4539161..4539919 | - | 759 | WP_000744205.1 | type IV secretion system protein | - |
| NED09_RS22270 (4539930) | 4539930..4542683 | - | 2754 | WP_284582208.1 | Type IV secretion system protein virB4 | VF |
| NED09_RS22275 (4542702) | 4542702..4542998 | - | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| NED09_RS22280 (4542976) | 4542976..4543623 | - | 648 | WP_000953532.1 | hypothetical protein | VF |
| NED09_RS22285 (4543656) | 4543656..4543868 | - | 213 | WP_000125172.1 | hypothetical protein | - |
| NED09_RS22290 (4543798) | 4543798..4544316 | - | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| NED09_RS22295 (4544669) | 4544669..4545835 | - | 1167 | WP_000539539.1 | MobP1 family relaxase | - |
| NED09_RS22300 (4545838) | 4545838..4546383 | - | 546 | WP_000757692.1 | DNA distortion polypeptide 1 | - |
| NED09_RS22305 (4546709) | 4546709..4546981 | - | 273 | WP_000167280.1 | hypothetical protein | - |
| NED09_RS22310 (4547214) | 4547214..4547393 | - | 180 | WP_000439079.1 | hypothetical protein | - |
| NED09_RS22315 (4547436) | 4547436..4547765 | - | 330 | WP_000866654.1 | hypothetical protein | - |
| NED09_RS22320 (4547859) | 4547859..4548101 | - | 243 | WP_000008708.1 | hypothetical protein | - |
| NED09_RS22325 (4548091) | 4548091..4548360 | - | 270 | WP_001006718.1 | hypothetical protein | - |
| NED09_RS22330 (4548369) | 4548369..4548917 | - | 549 | WP_001178641.1 | hypothetical protein | - |
| NED09_RS22335 (4548991) | 4548991..4549506 | - | 516 | WP_001025387.1 | J domain-containing protein | - |
| NED09_RS22340 (4549856) | 4549856..4550137 | - | 282 | WP_000220561.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| NED09_RS22345 (4550127) | 4550127..4550378 | - | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| NED09_RS22350 (4551399) | 4551399..4552268 | + | 870 | WP_001212191.1 | replication initiation protein | - |
| NED09_RS22355 (4552273) | 4552273..4553124 | + | 852 | WP_000435059.1 | replication initiation protein | - |
| NED09_RS22360 (4553128) | 4553128..4553574 | + | 447 | WP_001074378.1 | hypothetical protein | - |
| NED09_RS22365 (4553711) | 4553711..4554064 | + | 354 | WP_024156393.1 | DNA distortion polypeptide 3 | - |
| NED09_RS22370 (4554602) | 4554602..4555666 | - | 1065 | WP_000849600.1 | P-loop NTPase | - |
| NED09_RS22375 (4556090) | 4556090..4556320 | - | 231 | WP_000051066.1 | plasmid partition protein ParG | - |
| NED09_RS22380 (4556372) | 4556372..4556992 | - | 621 | WP_000864788.1 | ParA family protein | - |
| NED09_RS22385 (4557287) | 4557287..4557931 | + | 645 | WP_000203205.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| NED09_RS22390 (4558080) | 4558080..4558163 | - | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| NED09_RS22395 (4559318) | 4559318..4562323 | - | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| NED09_RS22400 (4562487) | 4562487..4563044 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| NED09_RS22405 (4563227) | 4563227..4564087 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| NED09_RS22410 (4564297) | 4564297..4564701 | + | 405 | Protein_4361 | IS91 family transposase ISPps1 | Transposase |
| NED09_RS22415 (4564808) | 4564808..4565644 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| NED09_RS22420 (4565644) | 4565644..4566447 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NED09_RS22425 (4566459) | 4566459..4566707 | - | 249 | Protein_4364 | helix-turn-helix domain-containing protein | - |
| NED09_RS22430 (4566707) | 4566707..4566844 | + | 138 | Protein_4365 | plasmid replication initiator TrfA | - |
| NED09_RS22435 (4566864) | 4566864..4566935 | + | 72 | Protein_4366 | TetR family transcriptional regulator | - |
| NED09_RS22440 (4567009) | 4567009..4567476 | + | 468 | WP_223155915.1 | GNAT family N-acetyltransferase | - |
| NED09_RS22445 (4567407) | 4567407..4568606 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| NED09_RS22450 (4568712) | 4568712..4569338 | + | 627 | WP_031606906.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| NED09_RS22455 (4569370) | 4569370..4569606 | - | 237 | WP_042005022.1 | hypothetical protein | - |
| NED09_RS22460 (4569660) | 4569660..4570496 | - | 837 | WP_000480972.1 | hypothetical protein | ARG |
| NED09_RS22465 (4570496) | 4570496..4571299 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| NED09_RS22470 (4571360) | 4571360..4572175 | - | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| NED09_RS22475 (4572505) | 4572505..4572591 | + | 87 | Protein_4374 | Arm DNA-binding domain-containing protein | - |
| NED09_RS22480 (4572863) | 4572863..4573432 | - | 570 | Protein_4375 | IS110 family transposase IS5075 | Transposase |
| NED09_RS22485 (4573485) | 4573485..4574189 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| NED09_RS22490 (4574244) | 4574244..4574492 | - | 249 | Protein_4377 | ABC transporter ATP-binding protein uup | VF |
| NED09_RS22495 (4574505) | 4574505..4576613 | - | 2109 | WP_001086485.1 | bifunctional 23S rRNA (guanine(2069)-N(7))-methyltransferase RlmK/23S rRNA (guanine(2445)-N(2))-methyltransferase RlmL | - |
| NED09_RS22500 (4576712) | 4576712..4577821 | + | 1110 | WP_000224079.1 | YcbX family protein | - |
| NED09_RS22505 (4577818) | 4577818..4578360 | - | 543 | WP_001574119.1 | cell division protein ZapC | - |
| NED09_RS22510 (4578526) | 4578526..4579536 | - | 1011 | WP_000291723.1 | quinone-dependent dihydroorotate dehydrogenase | - |
| NED09_RS22515 (4579744) | 4579744..4582356 | - | 2613 | WP_000193790.1 | aminopeptidase N | - |
| NED09_RS22520 (4582783) | 4582783..4582974 | + | 192 | WP_000497441.1 | DinI-like family protein | - |
| NED09_RS22525 (4583245) | 4583245..4583931 | + | 687 | WP_001525490.1 | virulence effector protease GtgE | - |
| NED09_RS22530 (4583916) | 4583916..4584222 | + | 307 | Protein_4385 | hypothetical protein | - |
| NED09_RS22535 (4584291) | 4584291..4584917 | + | 627 | WP_000334547.1 | SOS response-associated peptidase | - |
| NED09_RS22540 (4585049) | 4585049..4585467 | - | 419 | Protein_4387 | IS66 family transposase ISSfl3 | Transposase |
| NED09_RS22545 (4585565) | 4585565..4586533 | - | 969 | WP_001674638.1 | Secreted effector protein SseI | VF |
| NED09_RS22550 (4586702) | 4586702..4586788 | - | 87 | Protein_4389 | phage tail protein | - |
| NED09_RS22555 (4586792) | 4586792..4587007 | + | 216 | Protein_4390 | tail fiber assembly protein | - |
| NED09_RS22560 (4587011) | 4587011..4587592 | - | 582 | WP_000143167.1 | tail fiber assembly protein | - |
| NED09_RS22565 (4587592) | 4587592..4588464 | - | 873 | Protein_4392 | phage tail protein | - |
| NED09_RS22570 (4589298) | 4589298..4589924 | - | 627 | WP_000729406.1 | hypothetical protein | - |
| NED09_RS22575 (4589908) | 4589908..4590537 | - | 630 | WP_000274547.1 | hypothetical protein | - |
| NED09_RS22580 (4590558) | 4590558..4590776 | + | 219 | Protein_4395 | recombinase RecT | - |
| NED09_RS22585 (4591163) | 4591163..4592365 | + | 1203 | WP_000191404.1 | nicotinate phosphoribosyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|