MGE detailed information
MGE type: Prophage MGE length: 67138 bp
Accession: NZ_CP126076 Location: 1697863..1765000 Organism: Clostridioides difficile strain CDI-01 Replicon: chromosome
Accession: NZ_CP126076 Location: 1697863..1765000 Organism: Clostridioides difficile strain CDI-01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ITJ31_RS07925 (ITJ31_007925) | 1692968..1693729 | + | 762 | WP_009889424.1 | SprT family zinc-dependent metalloprotease | - |
| ITJ31_RS07930 (ITJ31_007930) | 1694260..1694499 | + | 240 | WP_003429800.1 | ACT domain-containing protein | - |
| ITJ31_RS07935 (ITJ31_007935) | 1694718..1695764 | + | 1047 | WP_225532668.1 | ketol-acid reductoisomerase | - |
| ITJ31_RS07940 (ITJ31_007940) | 1695817..1697505 | + | 1689 | WP_009888799.1 | biosynthetic-type acetolactate synthase large subunit | - |
| ITJ31_RS07945 (ITJ31_007945) | 1697863..1698993 | - | 1131 | WP_003429803.1 | site-specific integrase | - |
| ITJ31_RS07950 (ITJ31_007950) | 1699072..1699779 | - | 708 | WP_009888800.1 | HIRAN domain-containing protein | - |
| ITJ31_RS07955 (ITJ31_007955) | 1699792..1700661 | - | 870 | WP_009888801.1 | HipA domain-containing protein | - |
| ITJ31_RS07960 (ITJ31_007960) | 1701281..1701787 | - | 507 | WP_003429804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| ITJ31_RS07965 (ITJ31_007965) | 1701863..1702411 | - | 549 | WP_009893126.1 | helix-turn-helix transcriptional regulator | - |
| ITJ31_RS07970 (ITJ31_007970) | 1702423..1702764 | - | 342 | WP_009888806.1 | XRE family transcriptional regulator | - |
| ITJ31_RS07975 (ITJ31_007975) | 1702941..1703144 | + | 204 | WP_009893129.1 | helix-turn-helix domain-containing protein | - |
| ITJ31_RS07980 (ITJ31_007980) | 1703192..1704001 | + | 810 | WP_009888810.1 | phage antirepressor | - |
| ITJ31_RS07985 (ITJ31_007985) | 1704048..1704257 | + | 210 | WP_009888812.1 | hypothetical protein | - |
| ITJ31_RS07990 (ITJ31_007990) | 1704267..1704641 | - | 375 | WP_003433505.1 | DUF6173 family protein | - |
| ITJ31_RS07995 (ITJ31_007995) | 1704717..1704914 | + | 198 | WP_009888813.1 | helix-turn-helix transcriptional regulator | - |
| ITJ31_RS08000 (ITJ31_008000) | 1704945..1705337 | + | 393 | WP_009888815.1 | helix-turn-helix domain-containing protein | - |
| ITJ31_RS08005 (ITJ31_008005) | 1705318..1705467 | + | 150 | WP_003429817.1 | hypothetical protein | - |
| ITJ31_RS08010 (ITJ31_008010) | 1705538..1705975 | + | 438 | WP_003433513.1 | hypothetical protein | - |
| ITJ31_RS08015 (ITJ31_008015) | 1705987..1707153 | + | 1167 | WP_009888818.1 | DUF2800 domain-containing protein | - |
| ITJ31_RS08020 (ITJ31_008020) | 1707168..1707503 | + | 336 | WP_009888819.1 | hypothetical protein | - |
| ITJ31_RS08025 (ITJ31_008025) | 1707556..1708128 | + | 573 | WP_003429822.1 | sigma factor | - |
| ITJ31_RS08030 (ITJ31_008030) | 1708151..1708723 | + | 573 | WP_003433516.1 | DUF2815 family protein | - |
| ITJ31_RS08035 (ITJ31_008035) | 1708723..1710681 | + | 1959 | WP_009888821.1 | DNA polymerase | - |
| ITJ31_RS08040 (ITJ31_008040) | 1710693..1713110 | + | 2418 | WP_009888822.1 | virulence-associated E family protein | - |
| ITJ31_RS08045 (ITJ31_008045) | 1713392..1713718 | + | 327 | WP_003433522.1 | VRR-NUC domain-containing protein | - |
| ITJ31_RS08050 (ITJ31_008050) | 1713667..1715037 | + | 1371 | WP_009888823.1 | DEAD/DEAH box helicase | - |
| ITJ31_RS08055 (ITJ31_008055) | 1715061..1715198 | + | 138 | WP_009888824.1 | hypothetical protein | - |
| ITJ31_RS08060 (ITJ31_008060) | 1715191..1715670 | + | 480 | WP_009888825.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| ITJ31_RS08065 (ITJ31_008065) | 1715953..1716405 | + | 453 | WP_009888826.1 | phage antirepressor | - |
| ITJ31_RS08070 (ITJ31_008070) | 1716697..1717671 | + | 975 | WP_009888827.1 | hypothetical protein | - |
| ITJ31_RS08075 (ITJ31_008075) | 1717692..1718201 | + | 510 | WP_003429834.1 | hypothetical protein | - |
| ITJ31_RS08080 (ITJ31_008080) | 1718271..1718963 | + | 693 | WP_009888829.1 | phage terminase small subunit | - |
| ITJ31_RS08085 (ITJ31_008085) | 1718953..1720194 | + | 1242 | WP_009888830.1 | PBSX family phage terminase large subunit | - |
| ITJ31_RS08090 (ITJ31_008090) | 1720200..1721642 | + | 1443 | WP_009888831.1 | phage portal protein | - |
| ITJ31_RS08095 (ITJ31_008095) | 1721632..1723167 | + | 1536 | WP_009893134.1 | minor capsid protein | - |
| ITJ31_RS08100 (ITJ31_008100) | 1723169..1723417 | + | 249 | WP_009888832.1 | hypothetical protein | - |
| ITJ31_RS08105 (ITJ31_008105) | 1723485..1724048 | + | 564 | WP_009888833.1 | phage scaffolding protein | - |
| ITJ31_RS08110 (ITJ31_008110) | 1724060..1724950 | + | 891 | WP_009888834.1 | hypothetical protein | - |
| ITJ31_RS08115 (ITJ31_008115) | 1724969..1725202 | + | 234 | WP_009888835.1 | hypothetical protein | - |
| ITJ31_RS08120 (ITJ31_008120) | 1725212..1725613 | + | 402 | WP_009888836.1 | hypothetical protein | - |
| ITJ31_RS08125 (ITJ31_008125) | 1725607..1725954 | + | 348 | WP_003433540.1 | hypothetical protein | - |
| ITJ31_RS08130 (ITJ31_008130) | 1725954..1726244 | + | 291 | WP_009893135.1 | HK97 gp10 family phage protein | - |
| ITJ31_RS08135 (ITJ31_008135) | 1726354..1727160 | + | 807 | WP_009888838.1 | hypothetical protein | - |
| ITJ31_RS08140 (ITJ31_008140) | 1727509..1727946 | + | 438 | WP_009888839.1 | hypothetical protein | - |
| ITJ31_RS08145 (ITJ31_008145) | 1727939..1728115 | + | 177 | WP_009888840.1 | hypothetical protein | - |
| ITJ31_RS08150 (ITJ31_008150) | 1728116..1729426 | + | 1311 | WP_009893136.1 | phage tail sheath family protein | - |
| ITJ31_RS08155 (ITJ31_008155) | 1729443..1729913 | + | 471 | WP_009888842.1 | phage tail tube protein | - |
| ITJ31_RS08160 (ITJ31_008160) | 1729972..1730799 | + | 828 | WP_009888843.1 | hypothetical protein | - |
| ITJ31_RS08165 (ITJ31_008165) | 1730871..1731311 | + | 441 | WP_003429853.1 | phage portal protein | - |
| ITJ31_RS08170 (ITJ31_008170) | 1731652..1731813 | + | 162 | WP_003429855.1 | hypothetical protein | Toxin Detail |
| - | 1731733..1731872 | - | 140 | - | - | Antitoxin Detail |
| ITJ31_RS08175 (ITJ31_008175) | 1733150..1733338 | + | 189 | WP_003429858.1 | hypothetical protein | - |
| ITJ31_RS08180 (ITJ31_008180) | 1733457..1734323 | + | 867 | WP_009888845.1 | BRO family protein | - |
| ITJ31_RS08185 (ITJ31_008185) | 1734376..1734510 | + | 135 | WP_009888846.1 | hypothetical protein | - |
| ITJ31_RS08190 (ITJ31_008190) | 1735188..1735715 | + | 528 | WP_009888847.1 | DUF4352 domain-containing protein | - |
| ITJ31_RS08195 (ITJ31_008195) | 1735853..1736620 | + | 768 | WP_009888848.1 | DUF4428 domain-containing protein | - |
| ITJ31_RS08200 (ITJ31_008200) | 1736686..1739058 | + | 2373 | WP_009893138.1 | tape measure protein | - |
| ITJ31_RS08205 (ITJ31_008205) | 1739075..1739764 | + | 690 | WP_009888849.1 | LysM peptidoglycan-binding domain-containing protein | - |
| ITJ31_RS08210 (ITJ31_008210) | 1739757..1741649 | + | 1893 | WP_009893140.1 | NlpC/P60 family protein | - |
| ITJ31_RS08215 (ITJ31_008215) | 1741663..1741923 | + | 261 | WP_009893142.1 | DUF2577 domain-containing protein | - |
| ITJ31_RS08220 (ITJ31_008220) | 1741928..1742347 | + | 420 | WP_009888851.1 | DUF2634 domain-containing protein | - |
| ITJ31_RS08225 (ITJ31_008225) | 1742348..1743397 | + | 1050 | WP_009888852.1 | baseplate J/gp47 family protein | - |
| ITJ31_RS08230 (ITJ31_008230) | 1743390..1744007 | + | 618 | WP_003433579.1 | YmfQ family protein | - |
| ITJ31_RS08235 (ITJ31_008235) | 1744019..1745044 | + | 1026 | WP_009888853.1 | phage tail protein | - |
| ITJ31_RS08240 (ITJ31_008240) | 1745061..1746587 | + | 1527 | WP_009893144.1 | hypothetical protein | - |
| ITJ31_RS08245 (ITJ31_008245) | 1746602..1746895 | + | 294 | WP_009889429.1 | hypothetical protein | - |
| ITJ31_RS08250 (ITJ31_008250) | 1746895..1747077 | + | 183 | WP_009889431.1 | hypothetical protein | - |
| ITJ31_RS08255 (ITJ31_008255) | 1747111..1747677 | + | 567 | WP_009889434.1 | hypothetical protein | - |
| ITJ31_RS08260 (ITJ31_008260) | 1747708..1747998 | + | 291 | WP_009889435.1 | hypothetical protein | - |
| ITJ31_RS08265 (ITJ31_008265) | 1748002..1748259 | + | 258 | WP_009889440.1 | phage holin family protein | - |
| ITJ31_RS08270 (ITJ31_008270) | 1748520..1749383 | + | 864 | WP_003429958.1 | Abi family protein | - |
| ITJ31_RS08275 (ITJ31_008275) | 1749462..1750274 | + | 813 | WP_009889444.1 | N-acetylmuramoyl-L-alanine amidase | - |
| ITJ31_RS08280 (ITJ31_008280) | 1750368..1752767 | + | 2400 | WP_009893147.1 | cell wall-binding repeat-containing protein | - |
| ITJ31_RS08285 (ITJ31_008285) | 1752808..1752993 | - | 186 | WP_003433687.1 | hypothetical protein | - |
| ITJ31_RS08290 (ITJ31_008290) | 1753222..1753350 | - | 129 | WP_003433683.1 | hypothetical protein | - |
| ITJ31_RS08295 (ITJ31_008295) | 1753688..1754365 | + | 678 | WP_009889448.1 | manganese catalase family protein | - |
| ITJ31_RS08300 (ITJ31_008300) | 1754539..1756575 | + | 2037 | WP_009889450.1 | thioredoxin domain-containing protein | - |
| ITJ31_RS08305 (ITJ31_008305) | 1756766..1757332 | - | 567 | WP_009889452.1 | MarR family transcriptional regulator | - |
| ITJ31_RS08310 (ITJ31_008310) | 1757616..1758152 | + | 537 | WP_009889454.1 | alpha/beta fold hydrolase | - |
| ITJ31_RS08315 (ITJ31_008315) | 1758784..1758882 | + | 99 | Protein_1550 | transposase | - |
| ITJ31_RS08320 (ITJ31_008320) | 1758884..1760001 | + | 1118 | Protein_1551 | IS200/IS605 family element RNA-guided endonuclease TnpB | - |
| ITJ31_RS08325 (ITJ31_008325) | 1760120..1760527 | + | 408 | Protein_1552 | alpha/beta hydrolase | - |
| ITJ31_RS08330 (ITJ31_008330) | 1760992..1762206 | + | 1215 | WP_009893153.1 | helix-turn-helix transcriptional regulator | - |
| ITJ31_RS08335 (ITJ31_008335) | 1762626..1763147 | - | 522 | WP_009889468.1 | GNAT family N-acetyltransferase | - |
| ITJ31_RS08340 (ITJ31_008340) | 1763503..1764300 | + | 798 | WP_003436560.1 | 3D domain-containing protein | - |
| ITJ31_RS08345 (ITJ31_008345) | 1764410..1765000 | + | 591 | WP_009893156.1 | SGNH/GDSL hydrolase family protein | - |
| ITJ31_RS08350 (ITJ31_008350) | 1765066..1766763 | + | 1698 | WP_009893157.1 | phospho-sugar mutase | - |
| ITJ31_RS08355 (ITJ31_008355) | 1766977..1767816 | + | 840 | WP_003436555.1 | YihY/virulence factor BrkB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|