MGE detailed information
MGE type: Genomic_island MGE length: 27599 bp
Accession: NZ_CP125986 Location: 2201373..2228971 Organism: Pseudomonas rhodesiae strain 3.8 Replicon: chromosome
Accession: NZ_CP125986 Location: 2201373..2228971 Organism: Pseudomonas rhodesiae strain 3.8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMY54_RS13015 (QMY54_02602) | 2196827..2197645 | + | 819 | WP_034099078.1 | alpha/beta hydrolase | - |
| QMY54_RS13020 (QMY54_02603) | 2197812..2199266 | + | 1455 | WP_034114375.1 | alanine/glycine:cation symporter family protein | - |
| QMY54_RS13025 (QMY54_02604) | 2199329..2200705 | - | 1377 | WP_034099074.1 | MFS family transporter | - |
| QMY54_RS13030 (QMY54_02606) | 2201211..2202134 | + | 924 | WP_034099072.1 | LysR substrate-binding domain-containing protein | - |
| QMY54_RS13035 (QMY54_02607) | 2202280..2203389 | + | 1110 | WP_213634686.1 | MFS transporter | - |
| QMY54_RS13040 | 2203756..2204936 | - | 1181 | Protein_1994 | hypothetical protein ; Integrase | Integrase |
| QMY54_RS13045 | 2204822..2205223 | - | 402 | WP_260401358.1 | hypothetical protein | - |
| QMY54_RS13050 (QMY54_02611) | 2205231..2205578 | - | 348 | WP_034099069.1 | hypothetical protein | - |
| QMY54_RS13055 (QMY54_02612) | 2205730..2205963 | - | 234 | WP_034099068.1 | Arc family DNA-binding protein | - |
| QMY54_RS13060 | 2206790..2207000 | + | 211 | Protein_1998 | hypothetical protein | - |
| QMY54_RS13065 (QMY54_02614) | 2207078..2207386 | + | 309 | WP_034114377.1 | hypothetical protein | - |
| QMY54_RS13070 (QMY54_02615) | 2207409..2207627 | + | 219 | WP_034099062.1 | hypothetical protein | - |
| QMY54_RS13075 (QMY54_02616) | 2207740..2208504 | + | 765 | WP_034099060.1 | KilA-N domain-containing protein | - |
| QMY54_RS13080 | 2208544..2208708 | - | 165 | Protein_2002 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QMY54_RS13085 (QMY54_02617) | 2208851..2209156 | + | 306 | WP_284185083.1 | hypothetical protein | - |
| QMY54_RS13090 (QMY54_02618) | 2209089..2210144 | - | 1056 | WP_128662263.1 | hypothetical protein | - |
| QMY54_RS13095 (QMY54_02619) | 2210245..2210427 | + | 183 | WP_201020821.1 | helix-turn-helix domain-containing protein | - |
| QMY54_RS13100 (QMY54_02620) | 2210653..2212212 | + | 1560 | WP_063891117.1 | IS21 family transposase ISPpu7 | Transposase |
| QMY54_RS13105 (QMY54_02621) | 2212206..2212943 | + | 738 | WP_058199737.1 | IS21 family transposase ISBmu3 | Transposase |
| QMY54_RS13110 (QMY54_02622) | 2213326..2215407 | - | 2082 | WP_058199738.1 | S9 family peptidase | - |
| QMY54_RS13115 | 2215497..2215655 | + | 159 | WP_153529665.1 | hypothetical protein | - |
| QMY54_RS13120 (QMY54_02624) | 2215955..2216242 | - | 288 | WP_034099056.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QMY54_RS13125 (QMY54_02625) | 2216348..2216821 | - | 474 | WP_034114380.1 | hypothetical protein | - |
| QMY54_RS13130 (QMY54_02626) | 2217022..2217654 | + | 633 | WP_143506428.1 | hypothetical protein | - |
| QMY54_RS13135 (QMY54_02627) | 2218143..2218574 | - | 432 | WP_052229582.1 | helix-turn-helix domain-containing protein | - |
| QMY54_RS13140 (QMY54_02628) | 2218719..2218874 | + | 156 | WP_143506426.1 | Arc family DNA-binding protein | - |
| QMY54_RS13145 (QMY54_02629) | 2218948..2219178 | + | 231 | WP_236238667.1 | DUF3077 domain-containing protein | - |
| QMY54_RS13150 (QMY54_02630) | 2219256..2220059 | + | 804 | WP_034114382.1 | phage antirepressor KilAC domain-containing protein | - |
| QMY54_RS13155 (QMY54_02631) | 2220182..2220526 | + | 345 | WP_034114384.1 | toxin | Toxin Detail |
| QMY54_RS13160 (QMY54_02632) | 2220523..2220840 | + | 318 | WP_034099046.1 | transcriptional regulator | Antitoxin Detail |
| QMY54_RS13165 (QMY54_02633) | 2220892..2221317 | - | 426 | WP_005789662.1 | helix-turn-helix domain-containing protein | - |
| QMY54_RS13170 (QMY54_02634) | 2221416..2221652 | + | 237 | WP_034099043.1 | YdaS family helix-turn-helix protein | - |
| QMY54_RS13175 (QMY54_02635) | 2221738..2221857 | - | 120 | Protein_2021 | IS5 family transposase ISPal1 | Transposase |
| QMY54_RS13180 (QMY54_02636) | 2222077..2222928 | + | 852 | WP_034114387.1 | hypothetical protein | - |
| QMY54_RS13185 (QMY54_02637) | 2222928..2225879 | + | 2952 | WP_284185328.1 | hypothetical protein | - |
| QMY54_RS13190 (QMY54_02638) | 2225876..2227282 | + | 1407 | WP_034111069.1 | hypothetical protein | - |
| QMY54_RS13195 (QMY54_02639) | 2227266..2227829 | + | 564 | WP_034099035.1 | hypothetical protein | - |
| QMY54_RS13200 (QMY54_02642) | 2228308..2228971 | - | 664 | Protein_2026 | site-specific integrase | - |
| QMY54_RS13205 (QMY54_02643) | 2229678..2232083 | + | 2406 | WP_034111067.1 | TonB-dependent receptor | - |
| QMY54_RS13210 (QMY54_02644) | 2232373..2233041 | + | 669 | WP_047882629.1 | GntR family transcriptional regulator | - |
| QMY54_RS13215 (QMY54_02645) | 2233103..2233909 | + | 807 | WP_034099022.1 | ABC transporter substrate-binding protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|