MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 47644 bp
Accession: NZ_CP125857 Location: 816178..863821 Organism: Vibrio parahaemolyticus strain G855 Replicon: chromosome
Accession: NZ_CP125857 Location: 816178..863821 Organism: Vibrio parahaemolyticus strain G855 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMY43_RS19715 (QMY43_19715) | 811328..811873 | + | 546 | WP_031428144.1 | hypothetical protein | - |
| QMY43_RS19720 (QMY43_19720) | 811962..814439 | + | 2478 | WP_159404366.1 | hypothetical protein | - |
| QMY43_RS19725 (QMY43_19725) | 814418..815086 | + | 669 | WP_031428140.1 | fimbria/pilus periplasmic chaperone | - |
| QMY43_RS19730 (QMY43_19730) | 815083..816129 | + | 1047 | WP_140062043.1 | hypothetical protein | - |
| QMY43_RS19735 (QMY43_19735) | 816140..816829 | + | 690 | WP_159404364.1 | EAL domain-containing protein | - |
| QMY43_RS19740 (QMY43_19740) | 817154..818344 | + | 1191 | WP_159404363.1 | FIST N-terminal domain-containing protein | - |
| QMY43_RS19745 (QMY43_19745) | 818362..819762 | + | 1401 | WP_102780305.1 | aldehyde dehydrogenase family protein | - |
| QMY43_RS19750 (QMY43_19750) | 819821..820897 | + | 1077 | WP_031428128.1 | glycerol dehydrogenase | - |
| QMY43_RS19755 (QMY43_19755) | 821104..821433 | - | 330 | WP_031428126.1 | hypothetical protein | - |
| QMY43_RS19760 (QMY43_19760) | 821438..822268 | - | 831 | WP_108653901.1 | hypothetical protein | - |
| QMY43_RS19765 (QMY43_19765) | 822401..823126 | - | 726 | WP_236578053.1 | hypothetical protein | - |
| QMY43_RS19770 (QMY43_19770) | 824185..825177 | + | 993 | WP_108654759.1 | hypothetical protein | - |
| QMY43_RS19775 (QMY43_19775) | 825283..825750 | + | 468 | WP_108654760.1 | NUDIX domain-containing protein | - |
| QMY43_RS19780 (QMY43_19780) | 825725..825874 | + | 150 | WP_108654761.1 | DUF3265 domain-containing protein | - |
| QMY43_RS19785 (QMY43_19785) | 826340..827308 | - | 969 | WP_159404068.1 | IS30 family transposase ISVa6 | Transposase |
| QMY43_RS19790 (QMY43_19790) | 827423..827515 | + | 93 | WP_140321407.1 | DUF3265 domain-containing protein | - |
| QMY43_RS19795 (QMY43_19795) | 827617..827871 | + | 255 | WP_029865959.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| QMY43_RS19800 (QMY43_19800) | 827864..828133 | + | 270 | WP_029865924.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| QMY43_RS19805 (QMY43_19805) | 828286..828576 | - | 291 | WP_108653690.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QMY43_RS19810 (QMY43_19810) | 828566..828814 | - | 249 | WP_025611568.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| QMY43_RS19815 (QMY43_19815) | 828889..828957 | + | 69 | WP_080254664.1 | DUF3265 domain-containing protein | - |
| QMY43_RS19820 (QMY43_19820) | 829055..829561 | + | 507 | WP_229607483.1 | ClbS/DfsB family four-helix bundle protein | - |
| QMY43_RS19825 (QMY43_19825) | 829679..830167 | + | 489 | WP_108653692.1 | DUF523 domain-containing protein | - |
| QMY43_RS19830 (QMY43_19830) | 830371..831252 | - | 882 | WP_108653693.1 | HTH-type transcriptional regulator CatM | VF |
| QMY43_RS19835 (QMY43_19835) | 831356..832294 | + | 939 | WP_031428077.1 | DMT family transporter | - |
| QMY43_RS19840 (QMY43_19840) | 832638..833003 | - | 366 | WP_031428075.1 | hypothetical protein | - |
| QMY43_RS19845 (QMY43_19845) | 833070..834350 | - | 1281 | WP_108653694.1 | SgrR family transcriptional regulator | - |
| QMY43_RS19850 (QMY43_19850) | 835200..835688 | + | 489 | WP_031428070.1 | DNA repair protein RadC | - |
| QMY43_RS19855 (QMY43_19855) | 835724..836326 | - | 603 | WP_031428068.1 | DUF2913 family protein | - |
| QMY43_RS19860 (QMY43_19860) | 836980..837138 | + | 159 | WP_235191550.1 | hypothetical protein | - |
| QMY43_RS19865 (QMY43_19865) | 837554..838048 | + | 495 | WP_031428066.1 | hypothetical protein | - |
| QMY43_RS19870 (QMY43_19870) | 838597..838812 | + | 216 | WP_031428064.1 | hypothetical protein | - |
| QMY43_RS19875 (QMY43_19875) | 840235..840456 | + | 222 | WP_031428062.1 | hypothetical protein | - |
| QMY43_RS19880 (QMY43_19880) | 841464..841844 | + | 381 | WP_031428060.1 | hypothetical protein | - |
| QMY43_RS19885 (QMY43_19885) | 841848..842234 | + | 387 | WP_031428057.1 | hypothetical protein | - |
| QMY43_RS19890 (QMY43_19890) | 842308..842650 | + | 343 | Protein_744 | type I restriction endonuclease subunit M | - |
| QMY43_RS19895 (QMY43_19895) | 842704..843147 | + | 444 | WP_031428056.1 | hypothetical protein | VF |
| QMY43_RS19900 (QMY43_19900) | 843707..844066 | + | 360 | WP_108653741.1 | hypothetical protein | - |
| QMY43_RS19905 (QMY43_19905) | 844087..849882 | - | 5796 | WP_283278688.1 | conjugative transfer relaxase/helicase TraI | - |
| QMY43_RS19910 (QMY43_19910) | 849986..850135 | - | 150 | WP_108653698.1 | Hok/Gef family protein | - |
| QMY43_RS19915 (QMY43_19915) | 850336..851055 | - | 720 | WP_236578071.1 | endonuclease | - |
| QMY43_RS19920 (QMY43_19920) | 851142..851273 | - | 132 | WP_258231667.1 | hypothetical protein | - |
| QMY43_RS19925 (QMY43_19925) | 851304..853397 | - | 2094 | WP_108653700.1 | type IV conjugative transfer system coupling protein TraD | - |
| QMY43_RS19930 (QMY43_19930) | 853550..854107 | - | 558 | WP_108653701.1 | hypothetical protein | - |
| QMY43_RS19935 (QMY43_19935) | 854187..856994 | - | 2808 | WP_108653702.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| QMY43_RS19940 (QMY43_19940) | 856998..858407 | - | 1410 | WP_108653703.1 | conjugal transfer protein TraH | - |
| QMY43_RS19945 (QMY43_19945) | 858618..859031 | - | 414 | WP_108653704.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QMY43_RS19950 (QMY43_19950) | 859053..859844 | - | 792 | WP_236578052.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QMY43_RS19955 (QMY43_19955) | 859867..861603 | - | 1737 | WP_108653706.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QMY43_RS19960 (QMY43_19960) | 861600..862280 | - | 681 | WP_236578051.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QMY43_RS19965 (QMY43_19965) | 862424..863032 | - | 609 | WP_108653708.1 | hypothetical protein | - |
| QMY43_RS19970 (QMY43_19970) | 863036..863611 | - | 576 | WP_108653709.1 | hypothetical protein | - |
| QMY43_RS19975 (QMY43_19975) | 863623..864630 | - | 1008 | WP_108653710.1 | conjugal transfer pilus assembly protein TraU | - |
| QMY43_RS19980 (QMY43_19980) | 864627..865301 | - | 675 | WP_029863997.1 | type-F conjugative transfer system protein TraW | - |
| QMY43_RS19985 (QMY43_19985) | 865304..865651 | - | 348 | WP_029863998.1 | type-F conjugative transfer system protein TrbI | - |
| QMY43_RS19990 (QMY43_19990) | 865648..868236 | - | 2589 | WP_108653742.1 | type IV secretion system protein TraC | - |
| QMY43_RS19995 (QMY43_19995) | 868245..868631 | - | 387 | WP_108653711.1 | type IV conjugative transfer system lipoprotein TraV | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|