MGE detailed information
MGE type: Genomic_island MGE length: 13876 bp
Accession: NZ_CP125731 Location: 2404301..2418176 Organism: Escherichia coli strain GYB01 Replicon: chromosome
Accession: NZ_CP125731 Location: 2404301..2418176 Organism: Escherichia coli strain GYB01 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMW19_RS11670 (2404301) | 2404301..2404567 | + | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
| QMW19_RS11675 (2404567) | 2404567..2405889 | + | 1323 | WP_071208542.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| QMW19_RS11680 (2406201) | 2406201..2406409 | + | 209 | Protein_2284 | AraC family transcriptional regulator | - |
| QMW19_RS11685 (2406664) | 2406664..2407890 | + | 1227 | Protein_2285 | Outer membrane usher protein FimD | VF |
| QMW19_RS11690 (2407904) | 2407904..2408434 | + | 531 | WP_000876763.1 | Protein FimF | VF |
| QMW19_RS11695 (2408447) | 2408447..2408950 | + | 504 | WP_000825452.1 | Protein FimG | VF |
| QMW19_RS11700 (2409009) | 2409009..2409923 | + | 915 | WP_000520662.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| QMW19_RS11705 (2410257) | 2410257..2412536 | + | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| QMW19_RS11710 (2412784) | 2412784..2412981 | + | 198 | WP_000543384.1 | two-component system connector SafA | - |
| QMW19_RS11715 (2413056) | 2413056..2413817 | + | 762 | WP_000060492.1 | acid stress response transcriptional regulator YdeO | - |
| QMW19_RS11720 (2414219) | 2414219..2414440 | + | 222 | Protein_2292 | sulfatase | - |
| QMW19_RS11725 (2414496) | 2414496..2415464 | - | 969 | Protein_2293 | IS5-like element IS903B family transposase | - |
| QMW19_RS11730 (2415444) | 2415444..2416967 | + | 1524 | WP_230927790.1 | sulfatase | - |
| QMW19_RS11735 (2417019) | 2417019..2418176 | + | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| QMW19_RS11740 (2418142) | 2418142..2418264 | - | 123 | WP_120795387.1 | protein YneP | - |
| QMW19_RS11745 (2418467) | 2418467..2420152 | + | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| QMW19_RS11750 (2420190) | 2420190..2422562 | + | 2373 | WP_000832437.1 | TonB-dependent receptor plug domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0.006 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0.006 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.007 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.008 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0.006 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0.006 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0.006 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0.006 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0.006 |