MGE detailed information
MGE type: Genomic_island MGE length: 53095 bp
Accession: NZ_CP125656 Location: 1309668..1362762 Organism: Xanthomonas campestris strain GBBC 3139 Replicon: chromosome
Accession: NZ_CP125656 Location: 1309668..1362762 Organism: Xanthomonas campestris strain GBBC 3139 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMY62_RS05465 (QMY62_05465) | 1305231..1306016 | - | 786 | WP_011038258.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| QMY62_RS05470 (QMY62_05470) | 1306160..1306954 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| QMY62_RS05475 (QMY62_05475) | 1307003..1307203 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| QMY62_RS05480 (QMY62_05480) | 1307392..1309176 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| QMY62_RS05490 (QMY62_05490) | 1309440..1310996 | + | 1557 | WP_283269122.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| QMY62_RS05495 (QMY62_05495) | 1311224..1311970 | - | 747 | WP_167766520.1 | hypothetical protein | - |
| QMY62_RS05500 (QMY62_05500) | 1311986..1312849 | - | 864 | WP_167766519.1 | hypothetical protein | - |
| QMY62_RS05505 (QMY62_05505) | 1313320..1313700 | - | 381 | WP_209271700.1 | hypothetical protein | - |
| QMY62_RS05510 (QMY62_05510) | 1313697..1314011 | - | 315 | WP_283269132.1 | hypothetical protein | - |
| QMY62_RS05515 (QMY62_05515) | 1314054..1314815 | - | 762 | WP_283269134.1 | hypothetical protein | - |
| QMY62_RS05520 (QMY62_05520) | 1314917..1315258 | + | 342 | WP_167766516.1 | helix-turn-helix transcriptional regulator | - |
| QMY62_RS05525 (QMY62_05525) | 1315429..1316559 | + | 1131 | WP_167766515.1 | DNA phosphorothioation system sulfurtransferase DndC | - |
| QMY62_RS05530 (QMY62_05530) | 1316785..1318863 | + | 2079 | WP_167766513.1 | DNA sulfur modification protein DndD | - |
| QMY62_RS05535 (QMY62_05535) | 1318865..1320394 | + | 1530 | WP_209271699.1 | DndE family protein | - |
| QMY62_RS05540 (QMY62_05540) | 1320421..1320756 | + | 336 | WP_167766512.1 | hypothetical protein | - |
| QMY62_RS05545 (QMY62_05545) | 1320939..1322183 | - | 1245 | Protein_1069 | hypothetical protein ; Integrase | Integrase |
| QMY62_RS05550 (QMY62_05550) | 1322249..1323351 | + | 1103 | Protein_1070 | IS3 family transposase IS1404 | Transposase |
| QMY62_RS05555 (QMY62_05555) | 1323385..1323543 | - | 159 | Protein_1071 | integrase | - |
| QMY62_RS05560 (QMY62_05560) | 1324089..1324304 | + | 216 | WP_167766510.1 | hypothetical protein | - |
| QMY62_RS05565 (QMY62_05565) | 1324628..1325191 | + | 564 | WP_283269635.1 | DNA repair protein RadC | - |
| QMY62_RS05570 (QMY62_05570) | 1325285..1325926 | + | 642 | WP_283269138.1 | DUF1629 domain-containing protein | - |
| QMY62_RS05575 (QMY62_05575) | 1325960..1329982 | + | 4023 | WP_283269140.1 | hypothetical protein | - |
| QMY62_RS05580 (QMY62_05580) | 1330022..1330672 | + | 651 | WP_167766506.1 | hypothetical protein | - |
| QMY62_RS05585 (QMY62_05585) | 1331021..1332973 | + | 1953 | WP_283269142.1 | hypothetical protein | - |
| QMY62_RS05590 (QMY62_05590) | 1333027..1334253 | + | 1227 | WP_167766504.1 | hypothetical protein | - |
| QMY62_RS05600 (QMY62_05600) | 1335531..1337246 | + | 1716 | WP_283269144.1 | MobA/MobL family protein | - |
| QMY62_RS05605 (QMY62_05605) | 1337299..1337640 | - | 342 | WP_283269146.1 | hypothetical protein | - |
| QMY62_RS05610 (QMY62_05610) | 1338297..1338713 | + | 417 | WP_283269148.1 | hypothetical protein | - |
| QMY62_RS05615 (QMY62_05615) | 1339003..1339233 | - | 231 | WP_283269150.1 | hypothetical protein | - |
| QMY62_RS05620 (QMY62_05620) | 1339297..1339443 | + | 147 | WP_116889157.1 | hypothetical protein | - |
| QMY62_RS05625 (QMY62_05625) | 1339628..1340023 | + | 396 | WP_011038225.1 | hypothetical protein | - |
| QMY62_RS05630 (QMY62_05630) | 1340114..1340506 | + | 393 | WP_011038224.1 | H-NS family nucleoid-associated regulatory protein | - |
| QMY62_RS05635 (QMY62_05635) | 1341045..1343174 | - | 2130 | WP_283269153.1 | glycogen debranching protein GlgX | - |
| QMY62_RS05640 (QMY62_05640) | 1343667..1344542 | + | 876 | WP_011038222.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| QMY62_RS05645 (QMY62_05645) | 1345192..1345869 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| QMY62_RS05650 (QMY62_05650) | 1345862..1347196 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| QMY62_RS05655 (QMY62_05655) | 1347339..1347830 | - | 492 | WP_223646366.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QMY62_RS05660 (QMY62_05660) | 1347827..1348117 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QMY62_RS05665 (QMY62_05665) | 1348193..1348594 | - | 402 | WP_283269159.1 | SymE family type I addiction module toxin | - |
| QMY62_RS05670 (QMY62_05670) | 1349123..1349746 | - | 624 | WP_228424129.1 | dephospho-CoA kinase | - |
| QMY62_RS05675 (QMY62_05675) | 1349760..1350623 | - | 864 | WP_040940797.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| QMY62_RS05680 (QMY62_05680) | 1350630..1351832 | - | 1203 | WP_283269162.1 | Type II secretion system protein F | VF |
| QMY62_RS05685 (QMY62_05685) | 1352237..1352668 | + | 432 | WP_024939397.1 | Pilin-like competence factor ComP | VF |
| QMY62_RS05690 (QMY62_05690) | 1352765..1353178 | + | 414 | WP_283269165.1 | Fimbrial protein | VF |
| QMY62_RS05695 (QMY62_05695) | 1353220..1354953 | + | 1734 | WP_283269167.1 | putative type II secretion system protein HxcR | VF |
| QMY62_RS05700 (QMY62_05700) | 1355136..1355873 | - | 738 | WP_283269169.1 | zeta toxin family protein | - |
| QMY62_RS05705 (QMY62_05705) | 1355873..1356235 | - | 363 | WP_217694196.1 | hypothetical protein | - |
| QMY62_RS05710 (QMY62_05710) | 1356427..1357820 | - | 1394 | Protein_1102 | Transcriptional regulatory protein ZraR | VF |
| QMY62_RS05715 (QMY62_05715) | 1358029..1359639 | - | 1611 | WP_283269172.1 | Globin-coupled histidine kinase | VF |
| QMY62_RS05720 (QMY62_05720) | 1359873..1361042 | + | 1170 | WP_012437609.1 | ADP-forming succinate--CoA ligase subunit beta | - |
| QMY62_RS05725 (QMY62_05725) | 1361067..1361942 | + | 876 | WP_011038208.1 | succinate--CoA ligase subunit alpha | - |
| QMY62_RS05730 (QMY62_05730) | 1362172..1362456 | + | 285 | WP_040942253.1 | CopG family transcriptional regulator | - |
| QMY62_RS05735 (QMY62_05735) | 1362460..1362762 | + | 303 | WP_011038207.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QMY62_RS05740 (QMY62_05740) | 1362762..1364417 | + | 1656 | WP_016944993.1 | NAD+ synthase | - |
| QMY62_RS05745 (QMY62_05745) | 1364411..1365394 | - | 984 | WP_283269177.1 | hypothetical protein | - |
| QMY62_RS05750 (QMY62_05750) | 1365844..1366725 | - | 882 | WP_011038204.1 | outer membrane protein assembly factor BamD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|