MGE detailed information
MGE type: Mobilizable plasmid MGE length: 41037 bp
Accession: NZ_CP124811 Location: 1..41037 Organism: Citrobacter freundii strain CF13 Replicon: plasmid unnamed1
Accession: NZ_CP124811 Location: 1..41037 Organism: Citrobacter freundii strain CF13 Replicon: plasmid unnamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QLG16_RS24975 (QLG16_24975) | 1638..1946 | - | 309 | Protein_1 | replication initiation protein | - |
| QLG16_RS24985 (QLG16_24985) | 2805..4292 | - | 1488 | Protein_3 | group II intron reverse transcriptase/maturase | - |
| QLG16_RS24990 (QLG16_24990) | 4698..5129 | + | 432 | WP_000776034.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QLG16_RS24995 (QLG16_24995) | 5129..6400 | + | 1272 | WP_000457559.1 | Y-family DNA polymerase | - |
| QLG16_RS25000 (QLG16_25000) | 6482..7456 | - | 975 | WP_000064119.1 | ParB family protein | - |
| QLG16_RS25005 (QLG16_25005) | 7456..8661 | - | 1206 | WP_000368714.1 | AAA family ATPase | - |
| QLG16_RS25010 (QLG16_25010) | 9076..9345 | + | 270 | WP_000339857.1 | hypothetical protein | - |
| QLG16_RS25015 (QLG16_25015) | 9522..10388 | - | 867 | WP_004118283.1 | replication initiation protein | - |
| QLG16_RS25020 (QLG16_25020) | 10918..11022 | + | 105 | WP_032409716.1 | hypothetical protein | - |
| QLG16_RS25025 (QLG16_25025) | 11151..11408 | + | 258 | WP_000764642.1 | hypothetical protein | - |
| QLG16_RS25030 (QLG16_25030) | 11466..12242 | - | 777 | WP_000015958.1 | site-specific integrase | - |
| QLG16_RS25035 (QLG16_25035) | 12239..12982 | - | 744 | WP_000129823.1 | hypothetical protein | - |
| QLG16_RS25040 (QLG16_25040) | 13033..13383 | - | 351 | WP_000493378.1 | hypothetical protein | - |
| QLG16_RS25045 (QLG16_25045) | 13957..14187 | + | 231 | WP_001261276.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| QLG16_RS25050 (QLG16_25050) | 14184..14600 | + | 417 | WP_000754566.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| QLG16_RS25055 (QLG16_25055) | 14804..15612 | + | 809 | Protein_17 | IS3 family transposase ISEc15 | Transposase |
| QLG16_RS25060 (QLG16_25060) | 15718..16554 | - | 837 | WP_000480968.1 | hypothetical protein | ARG |
| QLG16_RS25065 (QLG16_25065) | 16554..17357 | - | 804 | WP_001082319.1 | Aminoglycoside 3'-phosphotransferase | ARG |
| QLG16_RS25075 (QLG16_25075) | 18658..19272 | - | 615 | WP_000904906.1 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| QLG16_RS25080 (QLG16_25080) | 19398..19523 | + | 126 | WP_012512729.1 | Tn3 family transposase TnpA_ISRsp12 | Transposase |
| QLG16_RS25085 (QLG16_25085) | 19627..20835 | + | 1209 | Protein_23 | IS4 family transposase IS10R | Transposase |
| QLG16_RS25090 (QLG16_25090) | 20845..21261 | - | 417 | WP_000275180.1 | Transposon Tn10 TetD protein | VF |
| QLG16_RS25095 (QLG16_25095) | 21349..21942 | + | 594 | WP_000428546.1 | tetracyline resistance-associated transcriptional repressor TetC | - |
| QLG16_RS25100 (QLG16_25100) | 22055..23260 | - | 1206 | WP_001089068.1 | Tetracycline resistance protein, class B | ARG |
| QLG16_RS25105 (QLG16_25105) | 23342..23965 | + | 624 | WP_000088605.1 | Tetracycline repressor protein class B from transposon Tn10 | VF |
| QLG16_RS25110 (QLG16_25110) | 23943..24284 | - | 342 | Protein_28 | transcriptional regulator | - |
| QLG16_RS25115 (QLG16_25115) | 24317..25285 | + | 969 | WP_001348255.1 | IS5 family transposase IS903 | Transposase |
| QLG16_RS25120 (QLG16_25120) | 25495..26615 | + | 1121 | WP_088765928.1 | IS3 family transposase ISRaq1 | Transposase |
| QLG16_RS25125 (QLG16_25125) | 26863..29037 | + | 2175 | WP_032494870.1 | AAA family ATPase | - |
| QLG16_RS25130 (QLG16_25130) | 29040..31643 | + | 2604 | WP_032494871.1 | nuclease domain-containing protein | - |
| QLG16_RS25135 (QLG16_25135) | 31669..32637 | - | 969 | WP_032494872.1 | IS5 family transposase IS903B | Transposase |
| QLG16_RS25140 (QLG16_25140) | 32833..33168 | - | 336 | Protein_34 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| QLG16_RS25145 (QLG16_25145) | 33688..33771 | + | 84 | Protein_35 | SOS response-associated peptidase | - |
| QLG16_RS25150 (QLG16_25150) | 33829..34254 | - | 426 | Protein_36 | IS5 family transposase IS903 | Transposase |
| QLG16_RS25155 (QLG16_25155) | 34402..35262 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QLG16_RS25160 (QLG16_25160) | 35445..36002 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QLG16_RS25165 (QLG16_25165) | 36166..39171 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QLG16_RS25170 (QLG16_25170) | 39207..39752 | - | 546 | Protein_40 | IS5 family transposase IS903B | Transposase |
| QLG16_RS25175 (QLG16_25175) | 40333..40719 | + | 387 | WP_001039464.1 | plasmid stabilization protein StbA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|