MGE detailed information
MGE type: Prophage MGE length: 75265 bp
Accession: NZ_CP124809 Location: 2806265..2881529 Organism: Citrobacter freundii strain CF13 Replicon: chromosome
Accession: NZ_CP124809 Location: 2806265..2881529 Organism: Citrobacter freundii strain CF13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QLG16_RS13595 () | 2801703..2803076 | + | 1374 | WP_200012470.1 | MFS transporter | - |
| QLG16_RS13600 () | 2803123..2804004 | - | 882 | WP_003034964.1 | protease HtpX | - |
| QLG16_RS13605 () | 2804197..2806245 | - | 2049 | WP_282624882.1 | carboxy terminal-processing peptidase | - |
| QLG16_RS13610 () | 2806265..2806951 | - | 687 | WP_003034957.1 | RNA chaperone ProQ | - |
| QLG16_RS13615 () | 2807048..2807545 | - | 498 | WP_282624884.1 | GAF domain-containing protein | - |
| QLG16_RS13620 () | 2807674..2808957 | + | 1284 | WP_003841983.1 | membrane integrity lipid transport subunit YebS | - |
| QLG16_RS13625 () | 2808926..2811559 | + | 2634 | WP_003034947.1 | Intermembrane transport protein YebT | VF |
| QLG16_RS13630 () | 2811672..2813060 | + | 1389 | WP_205688464.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QLG16_RS13635 () | 2813161..2813397 | + | 237 | WP_029139506.1 | YebV family protein | - |
| QLG16_RS13640 () | 2813500..2813691 | + | 192 | WP_003034941.1 | YebW family protein | - |
| QLG16_RS13645 () | 2813692..2814333 | - | 642 | WP_282624886.1 | protein-serine/threonine phosphatase | - |
| - | 2814482..2814625 | + | 144 | - | - | Antitoxin Detail |
| - | 2814487..2814590 | - | 104 | - | - | Toxin Detail |
| QLG16_RS13650 () | 2814746..2815084 | - | 339 | WP_061548576.1 | YebY family protein | - |
| QLG16_RS13655 () | 2815105..2815977 | - | 873 | WP_282624890.1 | copper homeostasis membrane protein CopD | - |
| QLG16_RS13660 () | 2815981..2816355 | - | 375 | WP_282624892.1 | CopC domain-containing protein YobA | - |
| QLG16_RS13665 () | 2816499..2816729 | + | 231 | WP_003034925.1 | DNA polymerase III subunit theta | - |
| QLG16_RS13670 () | 2816836..2817492 | + | 657 | WP_003841657.1 | carbon-nitrogen hydrolase family protein | - |
| QLG16_RS13675 () | 2817516..2818178 | + | 663 | WP_003034918.1 | exodeoxyribonuclease X | - |
| QLG16_RS13680 () | 2818169..2820223 | - | 2055 | WP_211924326.1 | oligopeptidase B | - |
| QLG16_RS13685 () | 2820310..2820969 | - | 660 | WP_137348675.1 | tellurite resistance TerB family protein | - |
| QLG16_RS13690 () | 2821064..2821417 | - | 354 | WP_003034909.1 | protein YebF | - |
| QLG16_RS13695 () | 2821539..2821829 | - | 291 | WP_003034906.1 | DNA damage-inducible protein YebG | - |
| QLG16_RS13700 () | 2821961..2823139 | + | 1179 | WP_048232229.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QLG16_RS13705 () | 2823208..2823849 | - | 642 | WP_003034901.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QLG16_RS13710 () | 2823884..2825695 | - | 1812 | WP_003841668.1 | phosphogluconate dehydratase | - |
| QLG16_RS13715 () | 2825929..2827404 | - | 1476 | WP_282624902.1 | glucose-6-phosphate dehydrogenase | - |
| QLG16_RS13720 () | 2827772..2828641 | + | 870 | WP_003034893.1 | MurR/RpiR family transcriptional regulator | - |
| QLG16_RS13725 () | 2828760..2830202 | + | 1443 | WP_003034890.1 | pyruvate kinase | - |
| QLG16_RS13730 () | 2830246..2831217 | - | 972 | WP_137348676.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QLG16_RS13735 () | 2831337..2832656 | - | 1320 | WP_003034883.1 | murein DD-endopeptidase MepM | - |
| QLG16_RS13740 () | 2832672..2833616 | - | 945 | WP_003844151.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QLG16_RS13745 () | 2833695..2834450 | + | 756 | WP_003034877.1 | Zinc import ATP-binding protein ZnuC | VF |
| QLG16_RS13750 () | 2834447..2835232 | + | 786 | WP_003034874.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QLG16_RS13755 () | 2835311..2836321 | - | 1011 | WP_003034872.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QLG16_RS13760 () | 2836330..2836941 | - | 612 | WP_003034869.1 | Holliday junction branch migration protein RuvA | - |
| QLG16_RS13765 () | 2837022..2837543 | - | 522 | WP_003034867.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QLG16_RS13770 () | 2837578..2838321 | - | 744 | WP_003034865.1 | putative transcriptional regulatory protein YebC | VF |
| QLG16_RS13775 () | 2838350..2838793 | - | 444 | WP_003034863.1 | dihydroneopterin triphosphate diphosphatase | - |
| QLG16_RS13780 () | 2838795..2840567 | - | 1773 | WP_282624907.1 | aspartate--tRNA ligase | - |
| QLG16_RS13785 () | 2840856..2841422 | + | 567 | WP_044700301.1 | hydrolase | - |
| QLG16_RS13790 () | 2841419..2841514 | + | 96 | Protein_2705 | hypothetical protein | - |
| QLG16_RS13795 () | 2841776..2842015 | + | 240 | WP_000497460.1 | DinI family protein | - |
| QLG16_RS13800 () | 2842101..2842511 | - | 411 | WP_048217473.1 | hemerythrin domain-containing protein | - |
| QLG16_RS13805 () | 2842703..2843035 | - | 333 | WP_003841689.1 | hypothetical protein | - |
| QLG16_RS13810 () | 2843114..2843356 | + | 243 | WP_086550229.1 | DinI family protein | - |
| QLG16_RS13815 () | 2843426..2844028 | - | 603 | WP_249415167.1 | tail fiber assembly protein | - |
| QLG16_RS13820 () | 2844888..2845196 | - | 309 | Protein_2711 | hypothetical protein | - |
| QLG16_RS13825 () | 2845208..2845789 | - | 582 | WP_181595340.1 | YmfQ family protein | - |
| QLG16_RS13830 () | 2845780..2846838 | - | 1059 | WP_213169042.1 | baseplate J/gp47 family protein | - |
| QLG16_RS13835 () | 2846825..2847250 | - | 426 | WP_122995909.1 | phage GP46 family protein | - |
| QLG16_RS13840 () | 2847250..2847798 | - | 549 | WP_181595338.1 | phage baseplate assembly protein V | - |
| QLG16_RS13845 () | 2847798..2848877 | - | 1080 | WP_213169044.1 | baseplate protein | - |
| QLG16_RS13850 () | 2848874..2850175 | - | 1302 | WP_213169046.1 | DNA circularization N-terminal domain-containing protein | - |
| QLG16_RS13855 () | 2850231..2850755 | - | 525 | WP_046671233.1 | hypothetical protein | - |
| QLG16_RS13860 () | 2850824..2852608 | - | 1785 | WP_213169048.1 | phage tail tape measure protein | - |
| QLG16_RS13865 () | 2852750..2853019 | - | 270 | WP_134215237.1 | phage tail assembly protein | - |
| QLG16_RS13870 () | 2853019..2853375 | - | 357 | WP_282624916.1 | phage tail tube protein | - |
| QLG16_RS13875 () | 2853375..2854874 | - | 1500 | WP_282624917.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| QLG16_RS13880 () | 2854864..2855040 | - | 177 | WP_282624919.1 | DUF2635 domain-containing protein | - |
| QLG16_RS13885 () | 2855049..2855609 | - | 561 | WP_282624921.1 | hypothetical protein | - |
| QLG16_RS13890 () | 2855609..2856112 | - | 504 | WP_179154427.1 | hypothetical protein | - |
| QLG16_RS13895 () | 2856087..2856500 | - | 414 | WP_179154428.1 | phage head closure protein | - |
| QLG16_RS13900 () | 2856497..2856820 | - | 324 | WP_213169052.1 | head-tail connector protein | - |
| QLG16_RS13905 () | 2856894..2858111 | - | 1218 | WP_109862848.1 | phage major capsid protein | - |
| QLG16_RS13910 () | 2858121..2858720 | - | 600 | WP_045888755.1 | HK97 family phage prohead protease | - |
| QLG16_RS13915 () | 2858713..2859939 | - | 1227 | WP_213169474.1 | phage portal protein | - |
| QLG16_RS13920 () | 2860087..2861820 | - | 1734 | WP_213169473.1 | terminase large subunit | - |
| QLG16_RS13925 () | 2861817..2862314 | - | 498 | WP_282624927.1 | phage terminase small subunit P27 family | - |
| QLG16_RS13930 () | 2862441..2862791 | - | 351 | WP_282626370.1 | HNH endonuclease | - |
| QLG16_RS13935 () | 2862859..2863383 | - | 525 | WP_125112471.1 | Rha family transcriptional regulator | - |
| QLG16_RS13940 () | 2863543..2864082 | - | 540 | WP_282624929.1 | DUF2514 domain-containing protein | - |
| QLG16_RS13945 () | 2864079..2864696 | - | 618 | WP_103798262.1 | glycoside hydrolase family 19 protein | - |
| QLG16_RS13950 () | 2864696..2864977 | - | 282 | WP_008784468.1 | phage holin family protein | - |
| QLG16_RS13955 () | 2864964..2865350 | - | 387 | WP_008784467.1 | phage holin family protein | - |
| QLG16_RS13960 () | 2865444..2866229 | - | 786 | WP_282624932.1 | hypothetical protein | - |
| QLG16_RS13965 () | 2866423..2867112 | - | 690 | WP_282624933.1 | bacteriophage antitermination protein Q | - |
| QLG16_RS13970 () | 2867134..2868189 | - | 1056 | WP_227409174.1 | DUF968 domain-containing protein | - |
| QLG16_RS13975 () | 2868200..2868715 | - | 516 | WP_240703943.1 | hypothetical protein | - |
| QLG16_RS13980 () | 2868718..2869602 | - | 885 | WP_282624937.1 | ORF6N domain-containing protein | - |
| QLG16_RS13985 () | 2869689..2870087 | - | 399 | WP_213752952.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QLG16_RS13990 () | 2870084..2871403 | - | 1320 | WP_282624940.1 | phage N-6-adenine-methyltransferase | - |
| QLG16_RS13995 () | 2871400..2872257 | - | 858 | WP_094543263.1 | conserved phage C-terminal domain-containing protein | - |
| QLG16_RS14000 () | 2872247..2872426 | - | 180 | WP_003034732.1 | DUF4222 domain-containing protein | - |
| QLG16_RS14005 () | 2872599..2873150 | - | 552 | WP_282624944.1 | YmfL family putative regulatory protein | - |
| QLG16_RS14010 () | 2873179..2873376 | - | 198 | WP_115601843.1 | Cro/CI family transcriptional regulator | - |
| QLG16_RS14015 () | 2873476..2874132 | + | 657 | WP_115602402.1 | S24 family peptidase | - |
| QLG16_RS14020 () | 2874493..2874939 | - | 447 | WP_053069233.1 | hypothetical protein | - |
| QLG16_RS14025 () | 2875609..2875980 | + | 372 | WP_001515608.1 | hypothetical protein | - |
| QLG16_RS14030 () | 2876037..2876864 | + | 828 | WP_282624948.1 | DUF2303 family protein | - |
| QLG16_RS14035 () | 2876993..2877532 | + | 540 | WP_282624949.1 | HD family hydrolase | - |
| QLG16_RS14040 () | 2877520..2877696 | + | 177 | WP_001253787.1 | hypothetical protein | - |
| QLG16_RS14045 () | 2877693..2877947 | + | 255 | WP_044865257.1 | hypothetical protein | - |
| QLG16_RS14050 () | 2877944..2878288 | + | 345 | WP_191214853.1 | hypothetical protein | - |
| QLG16_RS14055 () | 2878281..2878754 | + | 474 | WP_282624953.1 | class I SAM-dependent methyltransferase | - |
| QLG16_RS14060 () | 2878758..2879300 | + | 543 | WP_172750369.1 | hypothetical protein | - |
| QLG16_RS14065 () | 2879302..2879882 | + | 581 | Protein_2760 | 3'-5' exonuclease | - |
| QLG16_RS14070 () | 2879921..2880157 | + | 237 | WP_003034696.1 | excisionase family protein | - |
| QLG16_RS14075 () | 2880216..2881529 | + | 1314 | WP_282624956.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QLG16_RS14080 () | 2881508..2882281 | + | 774 | WP_044701478.1 | DUF72 domain-containing protein | - |
| QLG16_RS14085 () | 2882334..2882729 | + | 396 | WP_003034689.1 | MAPEG family protein | - |
| QLG16_RS14090 () | 2882770..2883513 | + | 744 | WP_003034686.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| QLG16_RS14095 () | 2883510..2884478 | + | 969 | WP_003839177.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| QLG16_RS14100 () | 2884722..2885468 | - | 747 | WP_032936856.1 | copper homeostasis protein CutC | - |
| QLG16_RS14105 () | 2885471..2886037 | - | 567 | WP_003034677.1 | VOC family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|