MGE detailed information
MGE type: Genomic_island MGE length: 21228 bp
Accession: NZ_CP124740 Location: 1973971..1995198 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: chromosome
Accession: NZ_CP124740 Location: 1973971..1995198 Organism: Escherichia coli O157:H7 str. EDL933 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QI555_RS09995 (1969697) | 1969697..1970239 | + | 543 | WP_000934391.1 | hypothetical protein | - |
| QI555_RS10000 (1970532) | 1970532..1972682 | + | 2151 | WP_001298933.1 | pyruvate/proton symporter BtsT | - |
| QI555_RS10005 (1972732) | 1972732..1972935 | + | 204 | WP_000467859.1 | YbdD/YjiX family protein | - |
| QI555_RS10010 (1972946) | 1972946..1973902 | + | 957 | WP_001297640.1 | GTPase | - |
| QI555_RS10015 (1973971) | 1973971..1975329 | - | 1359 | WP_001304004.1 | DUF262 domain-containing protein | - |
| QI555_RS10020 (1975338) | 1975338..1975622 | - | 285 | WP_001304005.1 | DUF262 domain-containing protein | - |
| QI555_RS10025 (1975900) | 1975900..1978332 | + | 2433 | WP_000819018.1 | DEAD/DEAH box helicase family protein | - |
| QI555_RS10030 (1978399) | 1978399..1979868 | + | 1470 | WP_001302468.1 | type I restriction-modification system subunit M | - |
| QI555_RS10035 (1979868) | 1979868..1981622 | + | 1755 | WP_000110082.1 | restriction endonuclease subunit S | - |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_15 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| - (1981772) | 1981772..1981848 | - | 77 | NuclAT_16 | - | Antitoxin Detail |
| QI555_RS10040 (1981843) | 1981843..1982184 | + | 342 | WP_000132630.1 | endoribonuclease SymE | Toxin Detail |
| QI555_RS10045 (1982231) | 1982231..1983394 | - | 1164 | WP_001304006.1 | DUF1524 domain-containing protein | - |
| QI555_RS10050 (1983442) | 1983442..1984323 | - | 882 | WP_001304007.1 | DUF262 domain-containing protein | - |
| QI555_RS10055 (1984466) | 1984466..1984618 | - | 153 | WP_001418365.1 | hypothetical protein | - |
| QI555_RS10060 (1984761) | 1984761..1986173 | + | 1413 | WP_000199295.1 | PLP-dependent aminotransferase family protein | - |
| QI555_RS10065 (1986416) | 1986416..1987373 | - | 958 | Protein_1976 | hypothetical protein | VF |
| QI555_RS10070 (1987840) | 1987840..1989072 | + | 1233 | WP_001136983.1 | multidrug efflux MFS transporter MdtM | - |
| QI555_RS10075 (1989113) | 1989113..1990384 | + | 1272 | WP_001037406.1 | DUF445 domain-containing protein | - |
| QI555_RS10080 (1990500) | 1990500..1991651 | + | 1152 | WP_001302931.1 | double-cubane-cluster-containing anaerobic reductase | - |
| QI555_RS10085 (1991661) | 1991661..1992428 | + | 768 | WP_000222489.1 | putative 2-hydroxyacyl-CoA dehydratase activator YjiL | - |
| QI555_RS10090 (1992425) | 1992425..1992691 | + | 267 | WP_000657677.1 | DUF3343 domain-containing protein | - |
| QI555_RS10095 (1993003) | 1993003..1995198 | + | 2196 | WP_000535069.1 | hypothetical protein | VF |
| QI555_RS10100 (1995464) | 1995464..1996306 | + | 843 | WP_000746206.1 | YjiK family protein | - |
| QI555_RS10105 (1996374) | 1996374..1997552 | + | 1179 | WP_001089435.1 | MFS transporter | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. EDL933 | NC_002655 | 5456776..5475497 | 0.003 | |||
| Escherichia coli O157:H7 str. Sakai | NC_002695 | 5426911..5445631 | 0.003 |