MGE detailed information
MGE type: Genomic_island MGE length: 13780 bp
Accession: NZ_CP124732 Location: 4812344..4826123 Organism: Pseudomonas sp. GM17 Replicon: chromosome
Accession: NZ_CP124732 Location: 4812344..4826123 Organism: Pseudomonas sp. GM17 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PMI20_RS21435 (PMI20_021435) | 4807372..4809909 | + | 2538 | WP_037036280.1 | PAS domain-containing sensor histidine kinase | - |
| PMI20_RS21440 (PMI20_021440) | 4809962..4810237 | + | 276 | WP_007932676.1 | peptidylprolyl isomerase | - |
| PMI20_RS21445 (PMI20_021445) | 4810425..4811342 | - | 918 | WP_007931044.1 | sugar kinase | - |
| PMI20_RS21450 (PMI20_021450) | 4811535..4812670 | + | 1136 | WP_238543459.1 | IS3 family transposase | - |
| PMI20_RS21455 (PMI20_021455) | 4812749..4813966 | - | 1218 | WP_007927373.1 | amino acid deaminase | - |
| PMI20_RS21460 (PMI20_021460) | 4814004..4814768 | - | 765 | WP_007927371.1 | IclR family transcriptional regulator | - |
| PMI20_RS21465 (PMI20_021465) | 4815004..4815390 | - | 387 | WP_007927369.1 | RidA family protein | - |
| PMI20_RS21470 (PMI20_021470) | 4815806..4816078 | + | 273 | WP_007927368.1 | hypothetical protein | - |
| PMI20_RS21475 (PMI20_021475) | 4816777..4816882 | - | 106 | Protein_4244 | AAA family ATPase | - |
| PMI20_RS21480 (PMI20_021480) | 4816970..4817761 | + | 792 | WP_007930528.1 | methyltransferase domain-containing protein | - |
| PMI20_RS21485 (PMI20_021485) | 4818227..4818709 | + | 483 | WP_007930527.1 | acyl-CoA thioesterase | - |
| PMI20_RS21490 (PMI20_021490) | 4818762..4820411 | + | 1650 | WP_007930525.1 | FMN-binding glutamate synthase family protein | - |
| PMI20_RS21495 (PMI20_021495) | 4820598..4820879 | - | 282 | WP_007930524.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PMI20_RS21500 (PMI20_021500) | 4820869..4821117 | - | 249 | WP_007930518.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PMI20_RS21505 (PMI20_021505) | 4821213..4822001 | - | 789 | WP_007930516.1 | helix-turn-helix transcriptional regulator | - |
| PMI20_RS21510 (PMI20_021510) | 4822086..4823084 | + | 999 | WP_007930514.1 | bile acid:sodium symporter family protein | - |
| PMI20_RS21515 (PMI20_021515) | 4823238..4824041 | - | 804 | WP_007930512.1 | hypothetical protein | - |
| PMI20_RS21520 (PMI20_021520) | 4824357..4826123 | + | 1767 | WP_007930510.1 | hypothetical protein | - |
| PMI20_RS21525 (PMI20_021525) | 4826191..4826643 | + | 453 | WP_007930508.1 | YccF domain-containing protein | - |
| PMI20_RS21530 (PMI20_021530) | 4826751..4827827 | + | 1077 | WP_007930501.1 | GGDEF domain-containing protein | - |
| PMI20_RS21535 (PMI20_021535) | 4827921..4828895 | + | 975 | WP_007930498.1 | response regulator | - |
| PMI20_RS21540 (PMI20_021540) | 4828916..4829833 | + | 918 | WP_007930496.1 | LysR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|