MGE detailed information
MGE type: Genomic_island MGE length: 45381 bp
Accession: NZ_CP124534 Location: 1192416..1237796 Organism: Xanthomonas campestris strain DX Replicon: chromosome
Accession: NZ_CP124534 Location: 1192416..1237796 Organism: Xanthomonas campestris strain DX Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJS70_RS04980 | 1188171..1188956 | - | 786 | WP_218065343.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| QJS70_RS04985 | 1189102..1189896 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| QJS70_RS04990 | 1189945..1190145 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| QJS70_RS04995 | 1190335..1192119 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| QJS70_RS05005 | 1192383..1193960 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| QJS70_RS05010 | 1194020..1194448 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| QJS70_RS05015 | 1194833..1195621 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| QJS70_RS05020 | 1195695..1196588 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| QJS70_RS05025 | 1196754..1197134 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| QJS70_RS05030 | 1197131..1197445 | - | 315 | WP_218065344.1 | hypothetical protein | - |
| QJS70_RS05035 | 1197495..1198256 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| QJS70_RS05040 | 1198434..1198733 | + | 300 | WP_230428394.1 | helix-turn-helix transcriptional regulator | - |
| QJS70_RS05045 | 1198802..1199233 | + | 432 | WP_100666318.1 | hypothetical protein | - |
| QJS70_RS05050 | 1199238..1199690 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| QJS70_RS05055 | 1199893..1201293 | - | 1401 | WP_218065345.1 | hypothetical protein ; Integrase | Integrase |
| QJS70_RS05060 | 1201901..1202416 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| QJS70_RS05065 | 1202505..1202990 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| QJS70_RS05070 | 1203123..1204607 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| QJS70_RS05075 | 1204687..1205652 | - | 966 | WP_145998827.1 | hypothetical protein | - |
| QJS70_RS05080 | 1206042..1206302 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| QJS70_RS05085 | 1206289..1206786 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| QJS70_RS05090 | 1206896..1207426 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| QJS70_RS05095 | 1207461..1208273 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| QJS70_RS05100 | 1208270..1208578 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| QJS70_RS05105 | 1208789..1209268 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| QJS70_RS05110 | 1209337..1209513 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| QJS70_RS05115 | 1209733..1210374 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| QJS70_RS05120 | 1210410..1212995 | + | 2586 | WP_218065346.1 | hypothetical protein | - |
| QJS70_RS05125 | 1213235..1214038 | - | 804 | WP_230428395.1 | hypothetical protein | - |
| QJS70_RS05130 | 1214322..1214828 | - | 507 | WP_230428396.1 | hypothetical protein | - |
| QJS70_RS05135 | 1214905..1215540 | + | 636 | WP_230428397.1 | hypothetical protein | - |
| QJS70_RS05140 | 1215658..1215816 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| QJS70_RS05145 | 1217197..1217198 | - | 2 | WP_283497125.1 | IS3 family transposase IS1404 | Transposase |
| QJS70_RS05150 | 1217883..1218359 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| QJS70_RS05155 | 1218521..1219267 | - | 747 | WP_218065347.1 | ATP-dependent endonuclease | - |
| QJS70_RS05160 | 1219362..1220159 | - | 798 | Protein_1001 | IS5 family transposase IS1480b | Transposase |
| QJS70_RS05165 | 1220134..1221345 | - | 1212 | WP_218065348.1 | AAA family ATPase | - |
| QJS70_RS05170 | 1221881..1222180 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| QJS70_RS05175 | 1222447..1224042 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| QJS70_RS05180 | 1224095..1224436 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| QJS70_RS05185 | 1225130..1225558 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| QJS70_RS05190 | 1225801..1226031 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| QJS70_RS05195 | 1226095..1226241 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| QJS70_RS05200 | 1226426..1226821 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| QJS70_RS05205 | 1226912..1227304 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| QJS70_RS05210 | 1227838..1229967 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| QJS70_RS05215 | 1230461..1231336 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| QJS70_RS05220 | 1231559..1232032 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| QJS70_RS05225 | 1232063..1232740 | + | 678 | WP_003490678.1 | Transcriptional regulatory protein TcrA | VF |
| QJS70_RS05230 | 1232733..1234067 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| QJS70_RS05235 | 1234210..1234701 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QJS70_RS05240 | 1234698..1234988 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QJS70_RS05245 | 1235063..1235464 | - | 402 | WP_019237348.1 | SymE family type I addiction module toxin | - |
| QJS70_RS05250 | 1235996..1236619 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| QJS70_RS05255 | 1236633..1237496 | - | 864 | WP_011038216.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| QJS70_RS05260 | 1237503..1238759 | - | 1257 | WP_011038215.1 | type II secretion system F family protein | - |
| QJS70_RS05265 | 1239086..1239526 | + | 441 | WP_011038214.1 | pilin | - |
| QJS70_RS05270 | 1239606..1240040 | + | 435 | WP_011038213.1 | pilin | - |
| QJS70_RS05275 | 1240105..1241838 | + | 1734 | WP_011038212.1 | type IV-A pilus assembly ATPase PilB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|