MGE detailed information
MGE type: Genomic_island MGE length: 45381 bp
Accession: NZ_CP124533 Location: 1192426..1237806 Organism: Xanthomonas campestris strain JN Replicon: chromosome
Accession: NZ_CP124533 Location: 1192426..1237806 Organism: Xanthomonas campestris strain JN Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJS72_RS04970 | 1188181..1188966 | - | 786 | WP_218065343.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| QJS72_RS04975 | 1189112..1189906 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| QJS72_RS04980 | 1189955..1190155 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| QJS72_RS04985 | 1190345..1192129 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| QJS72_RS04995 | 1192393..1193970 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| QJS72_RS05000 | 1194030..1194458 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| QJS72_RS05005 | 1194843..1195631 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| QJS72_RS05010 | 1195705..1196598 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| QJS72_RS05015 | 1196764..1197144 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| QJS72_RS05020 | 1197141..1197455 | - | 315 | WP_218065344.1 | hypothetical protein | - |
| QJS72_RS05025 | 1197505..1198266 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| QJS72_RS05030 | 1198444..1198743 | + | 300 | WP_230428394.1 | helix-turn-helix transcriptional regulator | - |
| QJS72_RS05035 | 1198812..1199243 | + | 432 | WP_100666318.1 | hypothetical protein | - |
| QJS72_RS05040 | 1199248..1199700 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| QJS72_RS05045 | 1199903..1201303 | - | 1401 | WP_218065345.1 | hypothetical protein ; Integrase | Integrase |
| QJS72_RS05050 | 1201911..1202426 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| QJS72_RS05055 | 1202515..1203000 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| QJS72_RS05060 | 1203133..1204617 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| QJS72_RS05065 | 1204697..1205662 | - | 966 | WP_145998827.1 | hypothetical protein | - |
| QJS72_RS05070 | 1206052..1206312 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| QJS72_RS05075 | 1206299..1206796 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| QJS72_RS05080 | 1206906..1207436 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| QJS72_RS05085 | 1207471..1208283 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| QJS72_RS05090 | 1208280..1208588 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| QJS72_RS05095 | 1208799..1209278 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| QJS72_RS05100 | 1209347..1209523 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| QJS72_RS05105 | 1209743..1210384 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| QJS72_RS05110 | 1210420..1213005 | + | 2586 | WP_218065346.1 | hypothetical protein | - |
| QJS72_RS05115 | 1213245..1214048 | - | 804 | WP_230428395.1 | hypothetical protein | - |
| QJS72_RS05120 | 1214332..1214838 | - | 507 | WP_230428396.1 | hypothetical protein | - |
| QJS72_RS05125 | 1214915..1215550 | + | 636 | WP_230428397.1 | hypothetical protein | - |
| QJS72_RS05130 | 1215668..1215826 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| QJS72_RS05135 | 1217208..1217209 | - | 2 | WP_283497125.1 | IS3 family transposase IS1404 | Transposase |
| QJS72_RS05140 | 1217894..1218370 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| QJS72_RS05145 | 1218532..1219290 | - | 759 | WP_234565086.1 | ATP-dependent endonuclease | - |
| QJS72_RS05155 | 1220144..1221355 | - | 1212 | WP_218065348.1 | AAA family ATPase | - |
| QJS72_RS05160 | 1221891..1222190 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| QJS72_RS05165 | 1222457..1224052 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| QJS72_RS05170 | 1224105..1224446 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| QJS72_RS05175 | 1225140..1225568 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| QJS72_RS05180 | 1225811..1226041 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| QJS72_RS05185 | 1226105..1226251 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| QJS72_RS05190 | 1226436..1226831 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| QJS72_RS05195 | 1226922..1227314 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| QJS72_RS05200 | 1227848..1229977 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| QJS72_RS05205 | 1230471..1231346 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| QJS72_RS05210 | 1231569..1232042 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| QJS72_RS05215 | 1232073..1232750 | + | 678 | WP_003490678.1 | Regulator of RpoS | VF |
| QJS72_RS05220 | 1232743..1234077 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| QJS72_RS05225 | 1234220..1234711 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QJS72_RS05230 | 1234708..1234998 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QJS72_RS05235 | 1235073..1235474 | - | 402 | WP_019237348.1 | SymE family type I addiction module toxin | - |
| QJS72_RS05240 | 1236006..1236629 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| QJS72_RS05245 | 1236643..1237506 | - | 864 | WP_011038216.1 | hypothetical protein | VF |
| QJS72_RS05250 | 1237513..1238769 | - | 1257 | WP_011038215.1 | type II secretion system F family protein | - |
| QJS72_RS05255 | 1239096..1239536 | + | 441 | WP_011038214.1 | pilin | - |
| QJS72_RS05260 | 1239616..1240050 | + | 435 | WP_011038213.1 | pilin | - |
| QJS72_RS05265 | 1240115..1241848 | + | 1734 | WP_011038212.1 | type IV-A pilus assembly ATPase PilB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|