MGE detailed information
MGE type: Genomic_island MGE length: 46588 bp
Accession: NZ_CP124531 Location: 1192357..1238944 Organism: Xanthomonas campestris strain TJ Replicon: chromosome
Accession: NZ_CP124531 Location: 1192357..1238944 Organism: Xanthomonas campestris strain TJ Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJS71_RS04980 | 1188112..1188897 | - | 786 | WP_218065343.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| QJS71_RS04985 | 1189043..1189837 | - | 795 | WP_011038257.1 | thiazole synthase | - |
| QJS71_RS04990 | 1189886..1190086 | - | 201 | WP_012437546.1 | sulfur carrier protein ThiS | - |
| QJS71_RS04995 | 1190276..1192060 | + | 1785 | WP_043890239.1 | autotransporter domain-containing esterase | - |
| QJS71_RS05005 | 1192324..1193901 | + | 1578 | WP_100666311.1 | hypothetical protein ; Integrase | Integrase |
| QJS71_RS05010 | 1193961..1194389 | + | 429 | WP_145998822.1 | hypothetical protein | - |
| QJS71_RS05015 | 1194774..1195562 | - | 789 | WP_145998823.1 | hypothetical protein | - |
| QJS71_RS05020 | 1195636..1196529 | - | 894 | WP_145998824.1 | hypothetical protein | - |
| QJS71_RS05025 | 1196695..1197075 | - | 381 | WP_172973787.1 | hypothetical protein | - |
| QJS71_RS05030 | 1197072..1197386 | - | 315 | WP_218065344.1 | hypothetical protein | - |
| QJS71_RS05035 | 1197436..1198197 | - | 762 | WP_100666316.1 | hypothetical protein | - |
| QJS71_RS05040 | 1198375..1198674 | + | 300 | WP_230428394.1 | helix-turn-helix transcriptional regulator | - |
| QJS71_RS05045 | 1198743..1199174 | + | 432 | WP_100666318.1 | hypothetical protein | - |
| QJS71_RS05050 | 1199179..1199631 | - | 453 | WP_145998825.1 | hypothetical protein | - |
| QJS71_RS05055 | 1199834..1201234 | - | 1401 | WP_218065345.1 | hypothetical protein ; Integrase | Integrase |
| QJS71_RS05060 | 1201842..1202357 | - | 516 | WP_100666321.1 | hypothetical protein | - |
| QJS71_RS05065 | 1202446..1202931 | + | 486 | WP_145998826.1 | hypothetical protein | - |
| QJS71_RS05070 | 1203064..1204548 | - | 1485 | WP_100666322.1 | hypothetical protein | - |
| QJS71_RS05075 | 1204628..1205113 | - | 486 | WP_283514703.1 | hypothetical protein | - |
| QJS71_RS05080 | 1206015..1206016 | - | 2 | WP_283497125.1 | IS3 family transposase IS1404 | Transposase |
| QJS71_RS05085 | 1206317..1206799 | - | 483 | WP_283514704.1 | hypothetical protein | - |
| QJS71_RS05090 | 1207189..1207449 | + | 261 | WP_145998828.1 | hypothetical protein | - |
| QJS71_RS05095 | 1207436..1207933 | - | 498 | WP_152091502.1 | hypothetical protein | - |
| QJS71_RS05100 | 1208043..1208573 | - | 531 | WP_152091503.1 | hypothetical protein | - |
| QJS71_RS05105 | 1208608..1209420 | - | 813 | WP_152091504.1 | hypothetical protein | - |
| QJS71_RS05110 | 1209417..1209725 | - | 309 | WP_152091505.1 | hypothetical protein | - |
| QJS71_RS05115 | 1209936..1210415 | + | 480 | WP_152091506.1 | DNA repair protein RadC | - |
| QJS71_RS05120 | 1210484..1210660 | + | 177 | WP_172973789.1 | hypothetical protein | - |
| QJS71_RS05125 | 1210880..1211521 | + | 642 | WP_152091507.1 | DUF1629 domain-containing protein | - |
| QJS71_RS05130 | 1211557..1214142 | + | 2586 | WP_218065346.1 | hypothetical protein | - |
| QJS71_RS05135 | 1214382..1215185 | - | 804 | WP_230428395.1 | hypothetical protein | - |
| QJS71_RS05140 | 1215469..1215975 | - | 507 | WP_230428396.1 | hypothetical protein | - |
| QJS71_RS05145 | 1216052..1216687 | + | 636 | WP_230428397.1 | hypothetical protein | - |
| QJS71_RS05150 | 1216805..1216963 | + | 159 | WP_172973790.1 | hypothetical protein | - |
| QJS71_RS05155 | 1218345..1218346 | - | 2 | WP_283497125.1 | IS3 family transposase IS1404 | Transposase |
| QJS71_RS05160 | 1219031..1219507 | - | 477 | WP_152091510.1 | hypothetical protein | - |
| QJS71_RS05165 | 1219669..1220427 | - | 759 | WP_234565086.1 | ATP-dependent endonuclease | - |
| QJS71_RS05170 | 1220510..1221307 | - | 798 | WP_283502712.1 | IS5 family transposase IS1480b | Transposase |
| QJS71_RS05175 | 1221282..1222493 | - | 1212 | WP_218065348.1 | AAA family ATPase | - |
| QJS71_RS05180 | 1223029..1223328 | - | 300 | WP_100666201.1 | conjugal transfer protein TraD | - |
| QJS71_RS05185 | 1223595..1225190 | + | 1596 | WP_100666199.1 | MobA/MobL family protein | - |
| QJS71_RS05190 | 1225243..1225584 | - | 342 | WP_100666197.1 | hypothetical protein | - |
| QJS71_RS05195 | 1226278..1226706 | + | 429 | WP_012437589.1 | hypothetical protein | - |
| QJS71_RS05200 | 1226949..1227179 | - | 231 | WP_157382680.1 | hypothetical protein | - |
| QJS71_RS05205 | 1227243..1227389 | + | 147 | WP_040940792.1 | hypothetical protein | - |
| QJS71_RS05210 | 1227574..1227969 | + | 396 | WP_016945003.1 | hypothetical protein | - |
| QJS71_RS05215 | 1228060..1228452 | + | 393 | WP_012437593.1 | H-NS family nucleoid-associated regulatory protein | - |
| QJS71_RS05220 | 1228986..1231115 | - | 2130 | WP_016945001.1 | glycogen debranching protein GlgX | - |
| QJS71_RS05225 | 1231609..1232484 | + | 876 | WP_016945000.1 | 30S ribosomal protein S6--L-glutamate ligase | - |
| QJS71_RS05230 | 1232707..1233180 | + | 474 | WP_012437597.1 | hypothetical protein | - |
| QJS71_RS05235 | 1233211..1233888 | + | 678 | WP_003490678.1 | Regulator of RpoS | VF |
| QJS71_RS05240 | 1233881..1235215 | + | 1335 | WP_012437598.1 | HAMP domain-containing sensor histidine kinase | - |
| QJS71_RS05245 | 1235358..1235849 | - | 492 | WP_011038220.1 | GNAT family N-acetyltransferase | Toxin Detail |
| QJS71_RS05250 | 1235846..1236136 | - | 291 | WP_011038219.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| QJS71_RS05255 | 1236211..1236612 | - | 402 | WP_019237348.1 | SymE family type I addiction module toxin | - |
| QJS71_RS05260 | 1237144..1237767 | - | 624 | WP_011038217.1 | dephospho-CoA kinase | - |
| QJS71_RS05265 | 1237781..1238644 | - | 864 | WP_011038216.1 | hypothetical protein | VF |
| QJS71_RS05270 | 1238651..1239907 | - | 1257 | WP_011038215.1 | type II secretion system F family protein | - |
| QJS71_RS05275 | 1240234..1240674 | + | 441 | WP_011038214.1 | pilin | - |
| QJS71_RS05280 | 1240754..1241188 | + | 435 | WP_011038213.1 | pilin | - |
| QJS71_RS05285 | 1241253..1242986 | + | 1734 | WP_011038212.1 | type IV-A pilus assembly ATPase PilB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|