MGE detailed information
MGE type: Genomic_island MGE length: 40924 bp
Accession: NZ_CP124508 Location: 4439602..4480525 Organism: Escherichia coli strain AVS0068 Replicon: chromosome
Accession: NZ_CP124508 Location: 4439602..4480525 Organism: Escherichia coli strain AVS0068 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB02_RS21595 (4435034) | 4435034..4435852 | - | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJB02_RS21600 (4435875) | 4435875..4436453 | - | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJB02_RS21610 (4438431) | 4438431..4439609 | + | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJB02_RS21615 (4439602) | 4439602..4441053 | + | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJB02_RS21620 (4441128) | 4441128..4441261 | - | 134 | Protein_4238 | phosphate-starvation-inducible protein PsiE | - |
| QJB02_RS21625 (4441263) | 4441263..4441379 | - | 117 | Protein_4239 | phosphoporin PhoE | - |
| QJB02_RS21630 (4441677) | 4441677..4442311 | + | 635 | Protein_4240 | IS3 family transposase IS2 | Transposase |
| QJB02_RS21635 (4442367) | 4442367..4443245 | - | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJB02_RS21640 (4443573) | 4443573..4444304 | - | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJB02_RS21645 (4445787) | 4445787..4447010 | - | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJB02_RS21650 (4447111) | 4447111..4447995 | + | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJB02_RS21655 (4448198) | 4448198..4448878 | + | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJB02_RS21660 (4449026) | 4449026..4449703 | + | 678 | WP_001097301.1 | hypothetical protein | - |
| QJB02_RS21665 (4449709) | 4449709..4449942 | + | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJB02_RS21670 (4450032) | 4450032..4450850 | + | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJB02_RS21675 (4450941) | 4450941..4451426 | + | 486 | WP_001588934.1 | antirestriction protein | - |
| QJB02_RS21680 (4451441) | 4451441..4451917 | + | 477 | WP_001588933.1 | RadC family protein | - |
| QJB02_RS21685 (4451986) | 4451986..4452207 | + | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJB02_RS21690 (4452286) | 4452286..4452654 | + | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJB02_RS21695 (4452744) | 4452744..4453121 | + | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJB02_RS21700 (4453118) | 4453118..4453606 | + | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJB02_RS21705 (4453618) | 4453618..4453815 | + | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJB02_RS21710 (4453900) | 4453900..4454754 | + | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJB02_RS21715 (4455072) | 4455072..4455231 | + | 160 | Protein_4257 | integrase | - |
| QJB02_RS21720 (4455491) | 4455491..4457029 | + | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB02_RS21725 (4457395) | 4457395..4458729 | + | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB02_RS21730 (4458809) | 4458809..4460956 | + | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB02_RS21735 (4461015) | 4461015..4462472 | + | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB02_RS21740 (4462709) | 4462709..4464226 | + | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB02_RS21745 (4464345) | 4464345..4464518 | - | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB02_RS21750 (4464546) | 4464546..4464842 | - | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB02_RS21755 (4465070) | 4465070..4465342 | - | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJB02_RS21760 (4465556) | 4465556..4469485 | - | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJB02_RS21765 (4470640) | 4470640..4471470 | - | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB02_RS21770 (4472368) | 4472368..4476219 | - | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJB02_RS21775 (4476625) | 4476625..4477194 | + | 570 | WP_001035569.1 | hypothetical protein | - |
| QJB02_RS21780 (4477256) | 4477256..4477960 | + | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJB02_RS21785 (4477988) | 4477988..4480525 | + | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJB02_RS21790 (4480635) | 4480635..4480907 | - | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB02_RS21795 (4480919) | 4480919..4481149 | - | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB02_RS21800 (4481330) | 4481330..4482961 | + | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJB02_RS21805 (4482958) | 4482958..4483677 | + | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|