MGE detailed information
MGE type: Prophage MGE length: 117905 bp
Accession: NZ_CP124508 Location: 2771958..2889862 Organism: Escherichia coli strain AVS0068 Replicon: chromosome
Accession: NZ_CP124508 Location: 2771958..2889862 Organism: Escherichia coli strain AVS0068 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB02_RS13360 (2768069) | 2768069..2768317 | - | 249 | WP_001531618.1 | protein YmgC | - |
| QJB02_RS13365 (2768430) | 2768430..2768696 | - | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| QJB02_RS13370 (2768725) | 2768725..2768997 | - | 273 | WP_000858012.1 | hypothetical protein | - |
| QJB02_RS13375 (2769040) | 2769040..2769276 | - | 237 | WP_000554153.1 | regulatory protein YcgZ | - |
| QJB02_RS13380 (2769590) | 2769590..2770801 | + | 1212 | WP_001311624.1 | blue light-responsive regulator BluF | - |
| QJB02_RS13385 (2771006) | 2771006..2771737 | + | 732 | WP_000332288.1 | DNA-binding transcriptional repressor BluR | - |
| QJB02_RS13390 (2771958) | 2771958..2772317 | + | 360 | WP_202752880.1 | DUF1398 family protein | - |
| QJB02_RS13400 (2773581) | 2773581..2774495 | + | 915 | WP_001256622.1 | putative periplasmic iron-binding protein | VF |
| QJB02_RS13405 (2774495) | 2774495..2775322 | + | 828 | WP_000983701.1 | Manganese transport system ATP-binding protein MntB | VF |
| QJB02_RS13410 (2775319) | 2775319..2776176 | + | 858 | WP_001101732.1 | Manganese transport system membrane protein MntB | ARG |
| QJB02_RS13415 (2776173) | 2776173..2777030 | + | 858 | WP_000968127.1 | Manganese transport system membrane protein MntB | ARG |
| QJB02_RS13420 (2777122) | 2777122..2777415 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| QJB02_RS13425 (2777428) | 2777428..2777706 | - | 279 | WP_000654168.1 | hypothetical protein | - |
| QJB02_RS13430 (2777874) | 2777874..2779487 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJB02_RS13435 (2779518) | 2779518..2779868 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJB02_RS13440 (2779865) | 2779865..2780290 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJB02_RS13445 (2780372) | 2780372..2782300 | - | 1929 | WP_001545960.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJB02_RS13450 (2782359) | 2782359..2785757 | - | 3399 | WP_001545959.1 | host specificity protein J | - |
| QJB02_RS13455 (2785818) | 2785818..2786390 | - | 573 | WP_001545958.1 | tail assembly protein | - |
| QJB02_RS13460 (2786387) | 2786387..2787130 | - | 744 | WP_000194748.1 | C40 family peptidase | - |
| QJB02_RS13465 (2787136) | 2787136..2787834 | - | 699 | WP_001152542.1 | phage minor tail protein L | - |
| QJB02_RS13470 (2787834) | 2787834..2788163 | - | 330 | WP_000847387.1 | phage tail protein | - |
| QJB02_RS13475 (2788160) | 2788160..2790721 | - | 2562 | WP_000840282.1 | phage tail tape measure protein | - |
| QJB02_RS13480 (2790714) | 2790714..2791148 | - | 435 | WP_000459449.1 | phage tail assembly protein T | - |
| QJB02_RS13485 (2791130) | 2791130..2791552 | - | 423 | WP_000479204.1 | phage minor tail protein G | - |
| QJB02_RS13490 (2791568) | 2791568..2792308 | - | 741 | WP_001545921.1 | phage tail protein | - |
| QJB02_RS13495 (2792316) | 2792316..2792711 | - | 396 | WP_000683150.1 | phage minor tail U family protein | - |
| QJB02_RS13500 (2792708) | 2792708..2793286 | - | 579 | WP_001007370.1 | phage tail protein | - |
| QJB02_RS13505 (2793298) | 2793298..2793651 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| QJB02_RS13510 (2793644) | 2793644..2794018 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJB02_RS13515 (2794070) | 2794070..2795098 | - | 1029 | WP_000522650.1 | major capsid protein | - |
| QJB02_RS13520 (2795156) | 2795156..2795503 | - | 348 | WP_000256813.1 | head decoration protein | - |
| QJB02_RS13525 (2795540) | 2795540..2797045 | - | 1506 | WP_001253893.1 | S49 family peptidase | - |
| QJB02_RS13530 (2797035) | 2797035..2798627 | - | 1593 | Protein_2657 | phage portal protein | - |
| QJB02_RS13535 (2798624) | 2798624..2798830 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| QJB02_RS13540 (2798814) | 2798814..2800742 | - | 1929 | WP_001573719.1 | phage terminase large subunit family protein | - |
| QJB02_RS13545 (2800714) | 2800714..2801262 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| QJB02_RS13550 (2801344) | 2801344..2801622 | - | 279 | WP_012896773.1 | hypothetical protein | - |
| QJB02_RS13555 (2801573) | 2801573..2801755 | + | 183 | WP_001205136.1 | hypothetical protein | - |
| QJB02_RS13560 (2801854) | 2801854..2802228 | - | 375 | WP_000084844.1 | hypothetical protein | - |
| QJB02_RS13565 (2802267) | 2802267..2802710 | - | 444 | WP_001441931.1 | lysis protein | - |
| QJB02_RS13570 (2802707) | 2802707..2803204 | - | 498 | WP_000075094.1 | lysozyme RrrD | - |
| QJB02_RS13575 (2803204) | 2803204..2803419 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QJB02_RS13580 (2804009) | 2804009..2805091 | + | 1083 | WP_000737277.1 | porin OmpC | - |
| QJB02_RS13585 (2805280) | 2805280..2805663 | - | 384 | WP_001204794.1 | antitermination protein QuuD | - |
| QJB02_RS13590 (2805749) | 2805749..2805889 | - | 141 | WP_000971095.1 | YlcG family protein | - |
| QJB02_RS13595 (2805886) | 2805886..2806248 | - | 363 | WP_001099697.1 | crossover junction endodeoxyribonuclease RusA | - |
| QJB02_RS13600 (2806245) | 2806245..2806535 | - | 291 | WP_000774475.1 | DUF1364 domain-containing protein | - |
| QJB02_RS13605 (2806528) | 2806528..2806698 | - | 171 | WP_000224907.1 | NinE family protein | - |
| QJB02_RS13610 (2806698) | 2806698..2807153 | - | 456 | WP_001053004.1 | DNA base-flipping protein YbcN | - |
| QJB02_RS13615 (2807150) | 2807150..2807251 | - | 102 | WP_072093903.1 | hypothetical protein | - |
| QJB02_RS13620 (2807601) | 2807601..2808644 | + | 1044 | WP_000700204.1 | alpha/beta hydrolase | - |
| QJB02_RS13625 (2808994) | 2808994..2810520 | - | 1527 | WP_000709098.1 | hypothetical protein ; Integrase | Integrase |
| QJB02_RS13630 (2810578) | 2810578..2810727 | - | 150 | WP_032143398.1 | hypothetical protein | - |
| QJB02_RS13635 (2810776) | 2810776..2811108 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| QJB02_RS13640 (2811176) | 2811176..2811478 | - | 303 | WP_000145918.1 | protein ren | - |
| QJB02_RS13645 (2811475) | 2811475..2812176 | - | 702 | WP_000788877.1 | replication protein P | - |
| QJB02_RS13650 (2812173) | 2812173..2813192 | - | 1020 | WP_000147914.1 | replication protein | - |
| QJB02_RS13655 (2813189) | 2813189..2813728 | - | 540 | WP_001182881.1 | toxin YdaT domain-containing protein | - |
| QJB02_RS13660 (2813759) | 2813759..2813986 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QJB02_RS13665 (2814097) | 2814097..2814789 | + | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| QJB02_RS13670 (2814870) | 2814870..2815931 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QJB02_RS13675 (2815909) | 2815909..2816286 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QJB02_RS13680 (2816762) | 2816762..2816968 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| QJB02_RS13685 (2817044) | 2817044..2817340 | + | 297 | WP_000995417.1 | host-nuclease inhibitor Gam family protein | - |
| QJB02_RS13690 (2817346) | 2817346..2818131 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QJB02_RS13695 (2818128) | 2818128..2818808 | + | 681 | WP_000186858.1 | YqaJ viral recombinase family protein | - |
| QJB02_RS13700 (2818805) | 2818805..2818987 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| QJB02_RS13705 (2818960) | 2818960..2819151 | + | 192 | WP_000548537.1 | DUF1382 family protein | - |
| QJB02_RS13710 (2819228) | 2819228..2819443 | + | 216 | WP_000188880.1 | hypothetical protein | - |
| QJB02_RS13715 (2819542) | 2819542..2819760 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| QJB02_RS13720 (2819808) | 2819808..2820047 | + | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| QJB02_RS13725 (2820187) | 2820187..2820423 | + | 237 | WP_000088653.1 | excisionase | - |
| QJB02_RS13730 (2820413) | 2820413..2821555 | + | 1143 | WP_000741335.1 | hypothetical protein ; Integrase | Integrase |
| QJB02_RS13735 (2821669) | 2821669..2822919 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| QJB02_RS13740 (2823091) | 2823091..2823744 | + | 654 | WP_001248677.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| QJB02_RS13745 (2823754) | 2823754..2824215 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| QJB02_RS13750 (2824269) | 2824269..2825375 | + | 1107 | WP_001295972.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| QJB02_RS13755 (2825411) | 2825411..2826052 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJB02_RS13760 (2826056) | 2826056..2827426 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJB02_RS13765 (2827595) | 2827595..2828266 | + | 672 | WP_001265481.1 | Transcriptional regulatory protein PhoP | VF |
| QJB02_RS13770 (2828266) | 2828266..2829726 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJB02_RS13775 (2829802) | 2829802..2830923 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJB02_RS13780 (2830972) | 2830972..2832198 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJB02_RS13785 (2832448) | 2832448..2833584 | + | 1137 | WP_000531594.1 | Spermidine/putrescine import ATP-binding protein PotA | VF |
| QJB02_RS13790 (2833568) | 2833568..2834431 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJB02_RS13795 (2834663) | 2834663..2834836 | - | 174 | Protein_2710 | tail fiber assembly protein | - |
| QJB02_RS13800 (2834986) | 2834986..2835654 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJB02_RS13805 (2835709) | 2835709..2836293 | - | 585 | WP_001545928.1 | tail fiber assembly protein | - |
| QJB02_RS13810 (2836293) | 2836293..2839319 | - | 3027 | WP_094315386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJB02_RS13815 (2839471) | 2839471..2840070 | - | 600 | WP_044066009.1 | Outer membrane protein X | VF |
| QJB02_RS13820 (2840138) | 2840138..2843830 | - | 3693 | WP_032198501.1 | phage tail protein | - |
| QJB02_RS13825 (2844174) | 2844174..2844755 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJB02_RS13830 (2844752) | 2844752..2845495 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| QJB02_RS13835 (2845506) | 2845506..2846204 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| QJB02_RS13840 (2846204) | 2846204..2846533 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJB02_RS13845 (2846530) | 2846530..2849091 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJB02_RS13850 (2849072) | 2849072..2849485 | - | 414 | WP_094315422.1 | phage tail assembly protein T | - |
| QJB02_RS13855 (2849512) | 2849512..2849943 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJB02_RS13860 (2849962) | 2849962..2850711 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJB02_RS13865 (2850719) | 2850719..2851114 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJB02_RS13870 (2851111) | 2851111..2851644 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJB02_RS13875 (2851660) | 2851660..2852013 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJB02_RS13880 (2852006) | 2852006..2852380 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJB02_RS13885 (2852432) | 2852432..2853460 | - | 1029 | WP_001573716.1 | major capsid protein | - |
| QJB02_RS13890 (2853518) | 2853518..2853865 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJB02_RS13895 (2853902) | 2853902..2855407 | - | 1506 | WP_001253888.1 | S49 family peptidase | - |
| QJB02_RS13900 (2855397) | 2855397..2856989 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJB02_RS13905 (2856986) | 2856986..2857192 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJB02_RS13910 (2857176) | 2857176..2859104 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJB02_RS13915 (2859076) | 2859076..2859585 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJB02_RS13920 (2860200) | 2860200..2860337 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJB02_RS13925 (2860544) | 2860544..2860870 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJB02_RS13930 (2861181) | 2861181..2861648 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJB02_RS13935 (2861651) | 2861651..2861782 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJB02_RS13940 (2861797) | 2861797..2861979 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJB02_RS13945 (2862136) | 2862136..2862669 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJB02_RS13950 (2863261) | 2863261..2863596 | - | 336 | Protein_2741 | YdfR family protein | - |
| QJB02_RS13955 (2863601) | 2863601..2863816 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJB02_RS13960 (2863966) | 2863966..2864127 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJB02_RS13965 (2864127) | 2864127..2864312 | - | 186 | Protein_2744 | DUF1737 domain-containing protein | - |
| QJB02_RS13970 (2864573) | 2864573..2864908 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJB02_RS13975 (2864979) | 2864979..2865095 | + | 117 | Protein_2746 | hypothetical protein | - |
| QJB02_RS13980 (2865189) | 2865189..2865320 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJB02_RS13995 (2866125) | 2866125..2867174 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJB02_RS14000 (2867325) | 2867325..2867522 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJB02_RS14005 (2867749) | 2867749..2868570 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJB02_RS14010 (2868567) | 2868567..2868947 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJB02_RS14015 (2868948) | 2868948..2870003 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJB02_RS14020 (2870005) | 2870005..2870283 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJB02_RS14025 (2870442) | 2870442..2870516 | - | 75 | Protein_2754 | hypothetical protein | - |
| QJB02_RS14030 (2870674) | 2870674..2871777 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJB02_RS14035 (2871758) | 2871758..2872408 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJB02_RS14040 (2872574) | 2872574..2872729 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJB02_RS14045 (2873021) | 2873021..2873365 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJB02_RS14050 (2873362) | 2873362..2873529 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJB02_RS14055 (2873540) | 2873540..2873803 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJB02_RS14060 (2873805) | 2873805..2874023 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJB02_RS14065 (2874025) | 2874025..2874240 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJB02_RS14070 (2874241) | 2874241..2874600 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJB02_RS14075 (2874597) | 2874597..2874773 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJB02_RS14080 (2874766) | 2874766..2874948 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJB02_RS14085 (2875077) | 2875077..2875388 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJB02_RS14090 (2875381) | 2875381..2875635 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJB02_RS14095 (2875632) | 2875632..2876054 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJB02_RS14100 (2876095) | 2876095..2877057 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJB02_RS14105 (2877080) | 2877080..2877505 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJB02_RS14110 (2877502) | 2877502..2877804 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJB02_RS14115 (2877903) | 2877903..2878274 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJB02_RS14120 (2878295) | 2878295..2878486 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJB02_RS14125 (2878488) | 2878488..2878766 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJB02_RS14130 (2879058) | 2879058..2879210 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJB02_RS14135 (2879222) | 2879222..2879560 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJB02_RS14140 (2879549) | 2879549..2879743 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJB02_RS14145 (2880310) | 2880310..2880498 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJB02_RS14150 (2880495) | 2880495..2880683 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJB02_RS14155 (2880779) | 2880779..2883250 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJB02_RS14160 (2883312) | 2883312..2883581 | + | 270 | WP_000003742.1 | excisionase | - |
| QJB02_RS14165 (2883550) | 2883550..2884668 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJB02_RS14170 (2884835) | 2884835..2885629 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJB02_RS14175 (2885626) | 2885626..2886672 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJB02_RS14180 (2886730) | 2886730..2887191 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJB02_RS14185 (2887188) | 2887188..2887976 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJB02_RS14190 (2888114) | 2888114..2888935 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJB02_RS14195 (2888951) | 2888951..2889862 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJB02_RS14200 (2889891) | 2889891..2891135 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJB02_RS14205 (2891135) | 2891135..2891836 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
| QJB02_RS14210 (2891829) | 2891829..2893028 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJB02_RS14215 (2893289) | 2893289..2894362 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|