MGE detailed information
MGE type: Genomic_island MGE length: 42095 bp
Accession: NZ_CP124502 Location: 523892..565986 Organism: Escherichia coli strain AVS0970 Replicon: chromosome
Accession: NZ_CP124502 Location: 523892..565986 Organism: Escherichia coli strain AVS0970 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP73_RS02390 (520740) | 520740..521459 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP73_RS02395 (521456) | 521456..523087 | - | 1632 | WP_001216464.1 | sensor histidine kinase | - |
| QJP73_RS02400 (523268) | 523268..523498 | + | 231 | WP_000371709.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP73_RS02405 (523510) | 523510..523782 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP73_RS02410 (523892) | 523892..526429 | - | 2538 | WP_000866257.1 | Outer membrane usher protein FimD | VF |
| QJP73_RS02415 (526457) | 526457..527161 | - | 705 | WP_001227591.1 | putative fimbrial chaperone YraI | VF |
| QJP73_RS02420 (527223) | 527223..527792 | - | 570 | WP_001035569.1 | hypothetical protein | - |
| QJP73_RS02425 (528198) | 528198..532049 | + | 3852 | WP_012896891.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP73_RS02430 (532947) | 532947..533777 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP73_RS02435 (534932) | 534932..538861 | + | 3930 | WP_001080127.1 | Serine protease EspC | VF |
| QJP73_RS02440 (539075) | 539075..539347 | + | 273 | WP_000405643.1 | GNAT family N-acetyltransferase | - |
| QJP73_RS02445 (539575) | 539575..539871 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP73_RS02450 (539899) | 539899..540072 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP73_RS02455 (540191) | 540191..541708 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP73_RS02460 (541945) | 541945..543402 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP73_RS02465 (543461) | 543461..545608 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP73_RS02470 (545688) | 545688..547022 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP73_RS02475 (547388) | 547388..548926 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP73_RS02480 (549186) | 549186..549345 | - | 160 | Protein_469 | integrase | - |
| QJP73_RS02485 (549663) | 549663..550517 | - | 855 | WP_001588930.1 | DUF4942 domain-containing protein | - |
| QJP73_RS02490 (550602) | 550602..550799 | - | 198 | WP_000839291.1 | DUF957 domain-containing protein | - |
| QJP73_RS02495 (550811) | 550811..551299 | - | 489 | WP_000761667.1 | DUF5983 family protein | - |
| QJP73_RS02500 (551296) | 551296..551673 | - | 378 | WP_000854747.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP73_RS02505 (551763) | 551763..552131 | - | 369 | WP_024186867.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP73_RS02510 (552210) | 552210..552431 | - | 222 | WP_000692312.1 | DUF987 domain-containing protein | - |
| QJP73_RS02515 (552500) | 552500..552976 | - | 477 | WP_001588933.1 | RadC family protein | - |
| QJP73_RS02520 (552991) | 552991..553476 | - | 486 | WP_001588934.1 | antirestriction protein | - |
| QJP73_RS02525 (553567) | 553567..554385 | - | 819 | WP_001175142.1 | DUF932 domain-containing protein | - |
| QJP73_RS02530 (554475) | 554475..554708 | - | 234 | WP_001278280.1 | DUF905 family protein | - |
| QJP73_RS02535 (554714) | 554714..555391 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP73_RS02540 (555539) | 555539..556219 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP73_RS02545 (556422) | 556422..557306 | - | 885 | WP_000010377.1 | YfjP family GTPase | - |
| QJP73_RS02550 (557407) | 557407..558630 | + | 1224 | WP_001107221.1 | hypothetical protein | - |
| QJP73_RS02555 (560113) | 560113..560844 | + | 732 | WP_001075487.1 | inovirus Gp2 family protein | - |
| QJP73_RS02560 (561172) | 561172..562050 | + | 879 | WP_000769117.1 | restriction endonuclease | - |
| QJP73_RS02565 (562106) | 562106..562740 | - | 635 | Protein_486 | IS3 family transposase IS2 | Transposase |
| QJP73_RS02570 (563038) | 563038..563154 | + | 117 | Protein_487 | phosphoporin PhoE | - |
| QJP73_RS02575 (563156) | 563156..563289 | + | 134 | Protein_488 | phosphate-starvation-inducible protein PsiE | - |
| QJP73_RS02580 (563364) | 563364..564815 | - | 1452 | WP_001063846.1 | Na+/H+ antiporter NhaC | - |
| QJP73_RS02585 (564808) | 564808..565986 | - | 1179 | WP_001534804.1 | MalY/PatB family protein | - |
| QJP73_RS02590 (566460) | 566460..567673 | + | 1214 | WP_162880626.1 | IS3 family transposase | - |
| QJP73_RS02595 (567964) | 567964..568542 | + | 579 | WP_000926369.1 | TetR/AcrR family transcriptional regulator | - |
| QJP73_RS02600 (568565) | 568565..569383 | + | 819 | WP_001270145.1 | winged helix-turn-helix domain-containing protein | - |
| QJP73_RS02605 (569383) | 569383..569901 | + | 519 | WP_001217008.1 | FidL-like protein | - |
| QJP73_RS02610 (570421) | 570421..570699 | + | 279 | WP_000502008.1 | BMC domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|