MGE detailed information
MGE type: Genomic_island MGE length: 48966 bp
Accession: NZ_CP124502 Location: 1265019..1313984 Organism: Escherichia coli strain AVS0970 Replicon: chromosome
Accession: NZ_CP124502 Location: 1265019..1313984 Organism: Escherichia coli strain AVS0970 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP73_RS05930 (1260313) | 1260313..1260714 | + | 402 | WP_000174703.1 | sigma factor-binding protein Crl | - |
| QJP73_RS05935 (1260753) | 1260753..1261808 | - | 1056 | WP_000749899.1 | phosphoporin PhoE | - |
| QJP73_RS05940 (1262097) | 1262097..1263200 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJP73_RS05945 (1263212) | 1263212..1264465 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJP73_RS05955 (1264670) | 1264670..1264873 | - | 204 | Protein_1149 | integrase | - |
| QJP73_RS05960 (1265019) | 1265019..1265489 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJP73_RS05965 (1265467) | 1265467..1265625 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJP73_RS05970 (1265832) | 1265832..1267079 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJP73_RS05975 (1267069) | 1267069..1268706 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJP73_RS05980 (1268700) | 1268700..1271798 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJP73_RS05985 (1272082) | 1272082..1272864 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJP73_RS05990 (1272851) | 1272851..1273771 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJP73_RS05995 (1273936) | 1273936..1274712 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| QJP73_RS06000 (1274920) | 1274920..1275255 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJP73_RS06005 (1275482) | 1275482..1275640 | - | 159 | Protein_1159 | integrase | - |
| QJP73_RS06010 (1275689) | 1275689..1275874 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJP73_RS06015 (1276089) | 1276089..1276703 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJP73_RS06020 (1276774) | 1276774..1276940 | + | 167 | Protein_1162 | tail fiber assembly protein | - |
| QJP73_RS06025 (1276952) | 1276952..1277281 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJP73_RS06030 (1277588) | 1277588..1278298 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJP73_RS06035 (1278267) | 1278267..1279910 | - | 1644 | WP_001265649.1 | Fimbria adhesin EcpD | VF |
| QJP73_RS06040 (1279900) | 1279900..1282425 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJP73_RS06045 (1282451) | 1282451..1283119 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJP73_RS06050 (1283176) | 1283176..1283763 | - | 588 | WP_001545819.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJP73_RS06055 (1283838) | 1283838..1284380 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJP73_RS06060 (1285204) | 1285204..1285429 | + | 226 | Protein_1170 | protein YkgL | - |
| QJP73_RS06065 (1285464) | 1285464..1285604 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJP73_RS06070 (1285604) | 1285604..1285867 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJP73_RS06075 (1286203) | 1286203..1286286 | - | 84 | Protein_1173 | hypothetical protein | - |
| QJP73_RS06080 (1286806) | 1286806..1287948 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| QJP73_RS06085 (1288121) | 1288121..1289041 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJP73_RS06090 (1289198) | 1289198..1290124 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP73_RS06095 (1290324) | 1290324..1291217 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP73_RS06100 (1291248) | 1291248..1292237 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJP73_RS06105 (1292264) | 1292264..1293115 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QJP73_RS06110 (1293681) | 1293681..1297928 | + | 4248 | WP_000092553.1 | hypothetical protein | VF |
| QJP73_RS06115 (1298053) | 1298053..1298910 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| QJP73_RS06120 (1299158) | 1299158..1300027 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| QJP73_RS06125 (1300187) | 1300187..1300780 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| QJP73_RS06130 (1300792) | 1300792..1301028 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QJP73_RS06135 (1301137) | 1301137..1302462 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QJP73_RS06140 (1302689) | 1302689..1303543 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QJP73_RS06145 (1304069) | 1304069..1304788 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| QJP73_RS06150 (1304799) | 1304799..1306226 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QJP73_RS06155 (1306219) | 1306219..1306914 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| QJP73_RS06160 (1307157) | 1307157..1307825 | - | 669 | WP_001545820.1 | protein YkgH | - |
| QJP73_RS06165 (1308009) | 1308009..1310300 | - | 2292 | WP_000798071.1 | outer membrane autotransporter HyxB | - |
| QJP73_RS06170 (1310342) | 1310342..1311103 | - | 762 | WP_001524129.1 | protein HyxA | - |
| QJP73_RS06175 (1311257) | 1311257..1312051 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| QJP73_RS06180 (1312381) | 1312381..1312944 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| QJP73_RS06185 (1314026) | 1314026..1315696 | - | 1671 | WP_001159126.1 | choline dehydrogenase | - |
| QJP73_RS06190 (1315710) | 1315710..1317182 | - | 1473 | WP_001545821.1 | betaine-aldehyde dehydrogenase | - |
| QJP73_RS06195 (1317196) | 1317196..1317783 | - | 588 | WP_001545822.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|