MGE detailed information
MGE type: Prophage MGE length: 53826 bp
Accession: NZ_CP124498 Location: 1933695..1987520 Organism: Escherichia coli strain AVS0655 Replicon: chromosome
Accession: NZ_CP124498 Location: 1933695..1987520 Organism: Escherichia coli strain AVS0655 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP65_RS09075 (1929179) | 1929179..1930108 | + | 930 | WP_000803366.1 | LysR substrate-binding domain-containing protein | - |
| QJP65_RS09080 (1930323) | 1930323..1930385 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| QJP65_RS09085 (1930375) | 1930375..1931733 | + | 1359 | WP_000019194.1 | putrescine/proton symporter PlaP | - |
| QJP65_RS09090 (1931807) | 1931807..1933231 | - | 1425 | WP_094327106.1 | exodeoxyribonuclease I | - |
| QJP65_RS09095 (1933413) | 1933413..1934591 | + | 1179 | WP_272718636.1 | DNA gyrase subunit A ; Integrase | Integrase |
| QJP65_RS09100 (1934572) | 1934572..1934763 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| QJP65_RS09105 (1934845) | 1934845..1935189 | - | 345 | WP_283187753.1 | hypothetical protein | - |
| QJP65_RS09110 (1935216) | 1935216..1935383 | - | 168 | WP_283187754.1 | hypothetical protein | - |
| QJP65_RS09115 (1935472) | 1935472..1935753 | - | 282 | WP_032082902.1 | hypothetical protein | - |
| QJP65_RS09120 (1935945) | 1935945..1936385 | - | 441 | WP_283187755.1 | ead/Ea22-like family protein | - |
| QJP65_RS09125 (1936382) | 1936382..1936549 | - | 168 | WP_001214441.1 | DUF2737 family protein | - |
| QJP65_RS09130 (1936560) | 1936560..1936856 | - | 297 | WP_137565812.1 | DUF2856 family protein | - |
| QJP65_RS09135 (1936880) | 1936880..1937263 | - | 384 | WP_000951325.1 | hypothetical protein | - |
| QJP65_RS09140 (1937263) | 1937263..1937868 | - | 606 | WP_000031370.1 | ERF family protein | - |
| QJP65_RS09145 (1937879) | 1937879..1938049 | - | 171 | WP_000050554.1 | hypothetical protein | - |
| QJP65_RS09150 (1938125) | 1938125..1938277 | - | 153 | WP_001243355.1 | host cell division inhibitory peptide Kil | - |
| QJP65_RS09155 (1938621) | 1938621..1939244 | - | 624 | WP_283187756.1 | Nmad5 family putative nucleotide modification protein | - |
| QJP65_RS09160 (1939306) | 1939306..1939578 | - | 273 | WP_086626356.1 | antitermination protein N | - |
| QJP65_RS09165 (1939556) | 1939556..1939778 | - | 223 | Protein_1799 | hypothetical protein | - |
| QJP65_RS09170 (1940016) | 1940016..1940636 | - | 621 | WP_016064020.1 | hypothetical protein | - |
| QJP65_RS09175 (1940633) | 1940633..1941067 | - | 435 | WP_283187757.1 | hypothetical protein | - |
| QJP65_RS09180 (1941118) | 1941118..1941813 | - | 696 | WP_096246228.1 | LexA family transcriptional regulator | - |
| QJP65_RS09185 (1941888) | 1941888..1942103 | + | 216 | WP_000067727.1 | helix-turn-helix transcriptional regulator | - |
| QJP65_RS09190 (1942245) | 1942245..1942541 | + | 297 | WP_000438527.1 | CII family transcriptional regulator | - |
| QJP65_RS09195 (1942574) | 1942574..1942735 | + | 162 | WP_000166961.1 | hypothetical protein | - |
| QJP65_RS09200 (1942722) | 1942722..1943543 | + | 822 | WP_000539350.1 | replication protein | - |
| QJP65_RS09205 (1943540) | 1943540..1944916 | + | 1377 | WP_283187758.1 | replicative DNA helicase | - |
| QJP65_RS09210 (1944989) | 1944989..1945195 | + | 207 | WP_000818849.1 | hypothetical protein | - |
| QJP65_RS09215 (1945213) | 1945213..1945533 | + | 321 | WP_130224132.1 | hypothetical protein | - |
| QJP65_RS09220 (1945536) | 1945536..1945946 | + | 411 | WP_283187759.1 | recombination protein NinB | - |
| QJP65_RS09225 (1945943) | 1945943..1946119 | + | 177 | WP_269542477.1 | NinE family protein | - |
| QJP65_RS09230 (1946122) | 1946122..1946505 | + | 384 | WP_283187760.1 | DUF2591 family protein | - |
| QJP65_RS09235 (1946498) | 1946498..1946674 | + | 177 | WP_052953382.1 | protein NinF | - |
| QJP65_RS09240 (1946667) | 1946667..1947278 | + | 612 | WP_283187761.1 | recombination protein NinG | - |
| QJP65_RS09245 (1947275) | 1947275..1947481 | + | 207 | WP_000144614.1 | phage NinH family protein | - |
| QJP65_RS09250 (1947459) | 1947459..1948124 | + | 666 | WP_283187762.1 | serine/threonine protein phosphatase | - |
| QJP65_RS09255 (1948121) | 1948121..1948744 | + | 624 | WP_001235461.1 | antitermination protein | - |
| QJP65_RS09260 (1949184) | 1949184..1949507 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| QJP65_RS09265 (1949491) | 1949491..1949967 | + | 477 | WP_000229392.1 | glycoside hydrolase family protein | - |
| QJP65_RS09270 (1949964) | 1949964..1950431 | + | 468 | WP_283187763.1 | lysis protein | - |
| QJP65_RS09275 (1950630) | 1950630..1951127 | + | 498 | WP_283187764.1 | KilA-N domain-containing protein | - |
| QJP65_RS09280 (1951401) | 1951401..1951748 | + | 348 | Protein_1822 | HNH endonuclease signature motif containing protein | - |
| QJP65_RS09285 (1951876) | 1951876..1952370 | + | 495 | WP_000929184.1 | phage terminase small subunit P27 family | - |
| QJP65_RS09290 (1952367) | 1952367..1954100 | + | 1734 | WP_000088159.1 | terminase large subunit | - |
| QJP65_RS09295 (1954112) | 1954112..1954294 | + | 183 | WP_000605605.1 | protein YmfR | - |
| QJP65_RS09300 (1954294) | 1954294..1955535 | + | 1242 | WP_000466258.1 | phage portal protein | - |
| QJP65_RS09305 (1955513) | 1955513..1956163 | + | 651 | WP_001193633.1 | HK97 family phage prohead protease | - |
| QJP65_RS09310 (1956178) | 1956178..1957383 | + | 1206 | WP_023908873.1 | phage major capsid protein | - |
| QJP65_RS09315 (1957433) | 1957433..1957621 | + | 189 | WP_023908872.1 | hypothetical protein | - |
| QJP65_RS09320 (1957633) | 1957633..1957938 | + | 306 | WP_283187765.1 | head-tail connector protein | - |
| QJP65_RS09325 (1957948) | 1957948..1958286 | + | 339 | WP_021543572.1 | phage head closure protein | - |
| QJP65_RS09330 (1958283) | 1958283..1958732 | + | 450 | WP_021543571.1 | HK97 gp10 family phage protein | - |
| QJP65_RS09335 (1958729) | 1958729..1959073 | + | 345 | WP_094308614.1 | DUF3168 domain-containing protein | - |
| QJP65_RS09340 (1959133) | 1959133..1959837 | + | 705 | WP_023908871.1 | phage tail tube protein | - |
| QJP65_RS09345 (1959852) | 1959852..1960223 | + | 372 | WP_283187766.1 | phage tail assembly chaperone | - |
| QJP65_RS09350 (1960247) | 1960247..1960525 | + | 279 | WP_000978930.1 | DUF4035 domain-containing protein | - |
| QJP65_RS09355 (1960572) | 1960572..1963784 | + | 3213 | WP_283187767.1 | phage tail tape measure protein | - |
| QJP65_RS09360 (1963777) | 1963777..1964118 | + | 342 | WP_074419730.1 | phage tail protein | - |
| QJP65_RS09365 (1964118) | 1964118..1964816 | + | 699 | WP_074419731.1 | phage minor tail protein L | - |
| QJP65_RS09370 (1964821) | 1964821..1965564 | + | 744 | WP_283187768.1 | C40 family peptidase | - |
| QJP65_RS09375 (1965462) | 1965462..1966109 | + | 648 | WP_000741576.1 | tail assembly protein | - |
| QJP65_RS09380 (1966170) | 1966170..1969649 | + | 3480 | WP_283187769.1 | host specificity protein J | - |
| QJP65_RS09385 (1969717) | 1969717..1970316 | + | 600 | WP_283187770.1 | Riboflavin transporter | VF |
| QJP65_RS09390 (1970381) | 1970381..1972588 | + | 2208 | WP_283187771.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP65_RS09395 (1972588) | 1972588..1972869 | + | 282 | WP_283187772.1 | hypothetical protein | - |
| QJP65_RS09400 (1972879) | 1972879..1973583 | + | 705 | WP_228192933.1 | tail fiber domain-containing protein | - |
| QJP65_RS09405 (1973594) | 1973594..1973881 | + | 288 | WP_283187773.1 | hypothetical protein | - |
| QJP65_RS09410 (1974555) | 1974555..1975721 | + | 1167 | WP_001296209.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| QJP65_RS09415 (1975840) | 1975840..1976313 | + | 474 | WP_001105376.1 | DNA gyrase inhibitor SbmC | - |
| QJP65_RS09420 (1976511) | 1976511..1977569 | + | 1059 | WP_001200894.1 | FUSC family protein | - |
| QJP65_RS09425 (1977741) | 1977741..1978070 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| QJP65_RS09430 (1978171) | 1978171..1978494 | - | 324 | WP_223216378.1 | EutP/PduV family microcompartment system protein | - |
| QJP65_RS09435 (1978473) | 1978473..1978553 | + | 81 | WP_023441679.1 | hypothetical protein | - |
| QJP65_RS09440 (1978764) | 1978764..1980305 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QJP65_RS09445 (1980320) | 1980320..1981066 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| QJP65_RS09450 (1981429) | 1981429..1981509 | - | 81 | Protein_1856 | hypothetical protein | - |
| QJP65_RS09455 (1981555) | 1981555..1981749 | - | 195 | WP_000988601.1 | DUF5983 family protein | - |
| QJP65_RS09460 (1981746) | 1981746..1982120 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| QJP65_RS09465 (1982209) | 1982209..1982577 | - | 369 | WP_001546021.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP65_RS09470 (1982657) | 1982657..1982878 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| QJP65_RS09475 (1982941) | 1982941..1983417 | - | 477 | WP_001186773.1 | RadC family protein | - |
| QJP65_RS09480 (1983433) | 1983433..1983906 | - | 474 | WP_001385393.1 | antirestriction protein | - |
| QJP65_RS09485 (1984169) | 1984169..1984990 | - | 822 | WP_001234710.1 | DUF932 domain-containing protein | - |
| QJP65_RS09490 (1985211) | 1985211..1985621 | - | 411 | WP_000846704.1 | hypothetical protein | - |
| QJP65_RS09495 (1985637) | 1985637..1986314 | - | 678 | WP_001362823.1 | hypothetical protein | - |
| QJP65_RS09500 (1986450) | 1986450..1987520 | - | 1071 | WP_000102631.1 | patatin-like phospholipase family protein | - |
| QJP65_RS09505 (1987517) | 1987517..1988422 | - | 906 | WP_000203550.1 | diguanylate cyclase regulator RdcB family protein | - |
| QJP65_RS09510 (1988419) | 1988419..1990803 | - | 2385 | WP_000544739.1 | dynamin family protein | - |
| QJP65_RS09515 (1991021) | 1991021..1991455 | - | 435 | WP_001069647.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|