MGE detailed information
MGE type: Conjugative plasmid MGE length: 75820 bp
Accession: NZ_CP124497 Location: 1..75820 Organism: Escherichia coli strain AVS0662 Replicon: plasmid pAVS0662-B
Accession: NZ_CP124497 Location: 1..75820 Organism: Escherichia coli strain AVS0662 Replicon: plasmid pAVS0662-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP57_RS24515 (1) | 1..858 | + | 858 | WP_052972859.1 | incFII family plasmid replication initiator RepA | - |
| QJP57_RS24520 (1770) | 1770..2039 | + | 270 | WP_000079935.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QJP57_RS24525 (2039) | 2039..2317 | + | 279 | WP_244493824.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QJP57_RS24530 (2363) | 2363..3211 | + | 849 | WP_001058003.1 | 3'-5' exonuclease | - |
| QJP57_RS24535 (3328) | 3328..3810 | + | 483 | WP_001311056.1 | hypothetical protein | - |
| QJP57_RS24540 (4170) | 4170..5286 | - | 1117 | Protein_5 | IS91 family transposase IS91 | Transposase |
| QJP57_RS24545 (5286) | 5286..5651 | - | 366 | WP_000124093.1 | hypothetical protein | - |
| QJP57_RS24550 (6179) | 6179..6688 | + | 510 | WP_000115002.1 | peptide deformylase | - |
| QJP57_RS24555 (6703) | 6703..6804 | + | 102 | Protein_8 | methionyl-tRNA formyltransferase | - |
| QJP57_RS24560 (7001) | 7001..7192 | + | 192 | WP_000175572.1 | DUF2164 family protein | - |
| QJP57_RS24565 (7189) | 7189..7551 | + | 363 | WP_000181069.1 | hypothetical protein | - |
| QJP57_RS24570 (7884) | 7884..8411 | - | 528 | WP_001196880.1 | DoxX family protein | - |
| QJP57_RS24575 (8413) | 8413..9171 | - | 759 | WP_001181584.1 | DNA-binding domain-containing protein | - |
| QJP57_RS24580 (9140) | 9140..10066 | - | 927 | WP_000989040.1 | DUF692 domain-containing protein | - |
| QJP57_RS24585 (10098) | 10098..10388 | - | 291 | WP_000754126.1 | DUF2282 domain-containing protein | - |
| QJP57_RS24590 (10697) | 10697..11254 | - | 558 | WP_000103553.1 | hypothetical protein | VF |
| QJP57_RS24595 (11901) | 11901..12467 | + | 567 | WP_072115864.1 | hypothetical protein | - |
| QJP57_RS24600 (12535) | 12535..12654 | - | 120 | Protein_17 | transposase domain-containing protein | - |
| QJP57_RS24605 (12856) | 12856..13836 | + | 981 | WP_001218105.1 | plasmid segregation protein ParM | - |
| QJP57_RS24610 (13839) | 13839..14261 | + | 423 | WP_000774834.1 | plasmid partitioning/stability family protein | - |
| QJP57_RS24615 (14285) | 14285..14575 | + | 291 | WP_061092123.1 | hypothetical protein | - |
| QJP57_RS24620 (14685) | 14685..15587 | + | 903 | WP_001464065.1 | DUF1281 domain-containing protein | - |
| QJP57_RS24625 (15584) | 15584..15895 | + | 312 | WP_012680995.1 | hypothetical protein | - |
| QJP57_RS24630 (15971) | 15971..16654 | + | 684 | WP_163444288.1 | DNA methylase | - |
| QJP57_RS24635 (16655) | 16655..16876 | + | 222 | WP_001104873.1 | hypothetical protein | - |
| QJP57_RS24640 (16806) | 16806..17324 | + | 519 | WP_224162043.1 | DUF1380 family protein | - |
| QJP57_RS24645 (17369) | 17369..18139 | + | 771 | WP_052972862.1 | hypothetical protein | - |
| QJP57_RS24650 (18555) | 18555..18980 | + | 426 | WP_001198888.1 | antirestriction protein | - |
| QJP57_RS24655 (19029) | 19029..19220 | + | 192 | WP_001027516.1 | hypothetical protein | - |
| QJP57_RS24660 (19493) | 19493..19741 | - | 249 | WP_071587243.1 | hypothetical protein | - |
| QJP57_RS24665 (20257) | 20257..20487 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| QJP57_RS24670 (20539) | 20539..21900 | + | 1362 | WP_000170668.1 | DUF3560 domain-containing protein | - |
| QJP57_RS24675 (21947) | 21947..22510 | + | 564 | WP_021515427.1 | class I SAM-dependent methyltransferase | - |
| QJP57_RS24680 (22510) | 22510..22764 | + | 255 | WP_077762872.1 | hypothetical protein | - |
| QJP57_RS24685 (22662) | 22662..22934 | + | 273 | WP_072130061.1 | hypothetical protein | - |
| QJP57_RS24690 (24059) | 24059..25234 | + | 1176 | WP_283184687.1 | reverse transcriptase domain-containing protein | - |
| QJP57_RS24695 (25305) | 25305..25730 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24700 (25727) | 25727..26077 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24705 (26108) | 26108..27721 | + | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP57_RS24710 (27778) | 27778..28500 | + | 723 | WP_249930304.1 | hypothetical protein | - |
| QJP57_RS24715 (28650) | 28650..29129 | + | 480 | WP_113956143.1 | single-stranded DNA-binding protein | - |
| QJP57_RS24720 (29185) | 29185..29418 | + | 234 | WP_000005971.1 | DUF905 domain-containing protein | - |
| QJP57_RS24725 (29479) | 29479..31428 | + | 1950 | WP_052972870.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP57_RS24730 (31483) | 31483..31917 | + | 435 | WP_000845950.1 | conjugation system SOS inhibitor PsiB | - |
| QJP57_RS24735 (31914) | 31914..32633 | + | 720 | WP_020246013.1 | plasmid SOS inhibition protein A | - |
| QJP57_RS24740 (32630) | 32630..32944 | + | 315 | WP_000870669.1 | hypothetical protein | - |
| - (32901) | 32901..33101 | + | 201 | NuclAT_0 | - | - |
| - (32901) | 32901..33101 | + | 201 | NuclAT_0 | - | - |
| - (32901) | 32901..33101 | + | 201 | NuclAT_0 | - | - |
| - (32901) | 32901..33101 | + | 201 | NuclAT_0 | - | - |
| - (32901) | 32901..33101 | - | 201 | NuclAT_0 | - | - |
| QJP57_RS24745 (33095) | 33095..33247 | + | 153 | Protein_46 | DUF5431 family protein | - |
| QJP57_RS24750 (33192) | 33192..33314 | + | 123 | WP_223720058.1 | Hok/Gef family protein | - |
| QJP57_RS24755 (33615) | 33615..33864 | - | 250 | Protein_48 | hypothetical protein | - |
| QJP57_RS24760 (34160) | 34160..34483 | + | 324 | WP_000533253.1 | hypothetical protein | - |
| QJP57_RS24765 (34542) | 34542..34784 | + | 243 | WP_000540588.1 | hypothetical protein | - |
| QJP57_RS24770 (35050) | 35050..35286 | + | 237 | WP_071594222.1 | hypothetical protein | - |
| QJP57_RS24775 (35757) | 35757..36053 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| QJP57_RS24780 (36163) | 36163..36984 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| QJP57_RS24785 (37281) | 37281..37883 | - | 603 | WP_077774972.1 | hypothetical protein | VF |
| QJP57_RS24790 (38206) | 38206..38589 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| QJP57_RS24795 (38783) | 38783..39454 | + | 672 | WP_021533564.1 | conjugal transfer transcriptional regulator TraJ | - |
| QJP57_RS24800 (39591) | 39591..39818 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| QJP57_RS24805 (39851) | 39851..40213 | + | 363 | WP_001098993.1 | type IV conjugative transfer system pilin TraA | - |
| QJP57_RS24810 (40228) | 40228..40539 | + | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| QJP57_RS24815 (40561) | 40561..41127 | + | 567 | WP_042960710.1 | type IV conjugative transfer system protein TraE | - |
| QJP57_RS24820 (41114) | 41114..41842 | + | 729 | WP_001230769.1 | type-F conjugative transfer system secretin TraK | - |
| QJP57_RS24825 (41842) | 41842..43269 | + | 1428 | WP_052972853.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| QJP57_RS24830 (43259) | 43259..43849 | + | 591 | WP_001535745.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| QJP57_RS24835 (43836) | 43836..44156 | + | 321 | WP_001057298.1 | conjugal transfer protein TrbD | - |
| QJP57_RS24840 (44149) | 44149..44400 | + | 252 | WP_001038333.1 | conjugal transfer protein TrbG | - |
| QJP57_RS24845 (44397) | 44397..44912 | + | 516 | WP_032234029.1 | type IV conjugative transfer system lipoprotein TraV | - |
| QJP57_RS24850 (45047) | 45047..45268 | + | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| QJP57_RS24855 (45261) | 45261..45734 | + | 474 | WP_000549568.1 | hypothetical protein | - |
| QJP57_RS24860 (45814) | 45814..46032 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| QJP57_RS24865 (46060) | 46060..46407 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| QJP57_RS24870 (46533) | 46533..49163 | + | 2631 | WP_052972854.1 | type IV secretion system protein TraC | - |
| QJP57_RS24875 (49160) | 49160..49546 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| QJP57_RS24880 (49543) | 49543..50175 | + | 633 | WP_032307988.1 | type-F conjugative transfer system protein TraW | - |
| QJP57_RS24885 (50172) | 50172..51164 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| QJP57_RS24890 (51173) | 51173..51811 | + | 639 | WP_000777692.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| QJP57_RS24895 (51808) | 51808..53658 | + | 1851 | WP_052972855.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| QJP57_RS24900 (53685) | 53685..53942 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| QJP57_RS24905 (53935) | 53935..54678 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| QJP57_RS24910 (54692) | 54692..55033 | + | 342 | WP_000556795.1 | conjugal transfer protein TrbA | - |
| QJP57_RS24915 (55014) | 55014..55349 | - | 336 | WP_000736414.1 | hypothetical protein | - |
| QJP57_RS24920 (55430) | 55430..55714 | + | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| QJP57_RS24925 (55701) | 55701..56246 | + | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| QJP57_RS24930 (56176) | 56176..56523 | + | 348 | WP_071840683.1 | P-type conjugative transfer protein TrbJ | - |
| QJP57_RS24935 (56504) | 56504..56896 | + | 393 | WP_283184688.1 | F-type conjugal transfer protein TrbF | - |
| QJP57_RS24940 (56883) | 56883..58256 | + | 1374 | WP_040210310.1 | conjugal transfer pilus assembly protein TraH | - |
| QJP57_RS24945 (58253) | 58253..61078 | + | 2826 | WP_052972856.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| QJP57_RS24950 (61075) | 61075..61584 | + | 510 | WP_000628099.1 | conjugal transfer entry exclusion protein TraS | - |
| QJP57_RS24955 (61598) | 61598..62329 | + | 732 | WP_000850422.1 | conjugal transfer complement resistance protein TraT | - |
| QJP57_RS24960 (62532) | 62532..63269 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| QJP57_RS24965 (63320) | 63320..65473 | + | 2154 | WP_062896779.1 | type IV conjugative transfer system coupling protein TraD | - |
| QJP57_RS24970 (65473) | 65473..70743 | + | 5271 | WP_283184686.1 | Multifunctional conjugation protein TraI | Relaxase |
| QJP57_RS24975 (70763) | 70763..71509 | + | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
| QJP57_RS24980 (71568) | 71568..72428 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| QJP57_RS24985 (72531) | 72531..73091 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| QJP57_RS24990 (73220) | 73220..73432 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| QJP57_RS24995 (73677) | 73677..74138 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| QJP57_RS25000 (74184) | 74184..74393 | + | 210 | WP_001309247.1 | hemolysin expression modulator Hha | - |
| QJP57_RS25005 (74432) | 74432..75022 | + | 591 | WP_000766805.1 | DUF2726 domain-containing protein | - |
| QJP57_RS25010 (75262) | 75262..75510 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| QJP57_RS25015 (75625) | 75625..75808 | + | 184 | Protein_100 | protein CopA/IncA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|