MGE detailed information
MGE type: Prophage MGE length: 61173 bp
Accession: NZ_CP124487 Location: 2894313..2955485 Organism: Escherichia coli strain AVS0542 Replicon: chromosome
Accession: NZ_CP124487 Location: 2894313..2955485 Organism: Escherichia coli strain AVS0542 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP68_RS14120 (2889922) | 2889922..2890563 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJP68_RS14125 (2890567) | 2890567..2891937 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJP68_RS14130 (2892106) | 2892106..2892777 | + | 672 | WP_001265481.1 | two-component system response regulator PhoP | - |
| QJP68_RS14135 (2892777) | 2892777..2894237 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJP68_RS14140 (2894313) | 2894313..2895434 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJP68_RS14145 (2895483) | 2895483..2896709 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJP68_RS14150 (2896959) | 2896959..2898095 | + | 1137 | WP_000531594.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP68_RS14155 (2898079) | 2898079..2898942 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJP68_RS14160 (2899174) | 2899174..2899347 | - | 174 | Protein_2783 | tail fiber assembly protein | - |
| QJP68_RS14165 (2899497) | 2899497..2900165 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJP68_RS14170 (2900220) | 2900220..2900804 | - | 585 | WP_000885577.1 | tail fiber assembly protein | - |
| QJP68_RS14175 (2900804) | 2900804..2903830 | - | 3027 | WP_000216487.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP68_RS14180 (2903982) | 2903982..2904581 | - | 600 | WP_001610945.1 | hypothetical protein | VF |
| QJP68_RS14185 (2904649) | 2904649..2908341 | - | 3693 | WP_001610944.1 | phage tail protein | - |
| QJP68_RS14190 (2908685) | 2908685..2909266 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJP68_RS14195 (2909263) | 2909263..2910006 | - | 744 | WP_000194723.1 | C40 family peptidase | - |
| QJP68_RS14200 (2910017) | 2910017..2910715 | - | 699 | WP_001309428.1 | phage minor tail protein L | - |
| QJP68_RS14205 (2910715) | 2910715..2911044 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJP68_RS14210 (2911041) | 2911041..2913602 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJP68_RS14215 (2913583) | 2913583..2913996 | - | 414 | WP_000533401.1 | phage tail assembly protein T | - |
| QJP68_RS14220 (2914023) | 2914023..2914454 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJP68_RS14225 (2914473) | 2914473..2915222 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJP68_RS14230 (2915230) | 2915230..2915625 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJP68_RS14235 (2915622) | 2915622..2916155 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJP68_RS14240 (2916171) | 2916171..2916524 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJP68_RS14245 (2916517) | 2916517..2916891 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP68_RS14250 (2916943) | 2916943..2917971 | - | 1029 | WP_000522603.1 | major capsid protein | - |
| QJP68_RS14255 (2918029) | 2918029..2918376 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJP68_RS14260 (2918413) | 2918413..2919918 | - | 1506 | WP_001611311.1 | S49 family peptidase | - |
| QJP68_RS14265 (2919908) | 2919908..2921500 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP68_RS14270 (2921497) | 2921497..2921703 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP68_RS14275 (2921687) | 2921687..2923615 | - | 1929 | WP_001610650.1 | phage terminase large subunit family protein | - |
| QJP68_RS14280 (2923587) | 2923587..2924096 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP68_RS14285 (2924711) | 2924711..2924848 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP68_RS14290 (2925055) | 2925055..2925381 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP68_RS14295 (2925692) | 2925692..2926159 | - | 468 | WP_032142285.1 | lysis protein | - |
| QJP68_RS14300 (2926162) | 2926162..2926293 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP68_RS14305 (2926308) | 2926308..2926490 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP68_RS14310 (2926647) | 2926647..2927180 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP68_RS14315 (2927772) | 2927772..2928107 | - | 336 | Protein_2814 | YdfR family protein | - |
| QJP68_RS14320 (2928112) | 2928112..2928327 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP68_RS14325 (2928404) | 2928404..2928649 | - | 246 | WP_001538590.1 | DUF826 domain-containing protein | - |
| QJP68_RS14330 (2928687) | 2928687..2928869 | - | 183 | WP_023143432.1 | DUF1378 family protein | - |
| QJP68_RS14335 (2929006) | 2929006..2930967 | - | 1962 | WP_001610646.1 | SASA family carbohydrate esterase | - |
| QJP68_RS14340 (2931228) | 2931228..2931563 | + | 336 | WP_001443236.1 | anti-adapter protein IraM | - |
| QJP68_RS14345 (2931948) | 2931948..2932145 | - | 198 | WP_000917765.1 | hypothetical protein | - |
| QJP68_RS14350 (2932370) | 2932370..2932924 | - | 555 | WP_000640021.1 | DUF1133 family protein | - |
| QJP68_RS14355 (2932933) | 2932933..2933292 | - | 360 | WP_000904110.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP68_RS14360 (2933305) | 2933305..2934351 | - | 1047 | WP_001610645.1 | DUF968 domain-containing protein | - |
| QJP68_RS14365 (2934353) | 2934353..2934631 | - | 279 | WP_032141837.1 | hypothetical protein | - |
| QJP68_RS14370 (2934798) | 2934798..2934953 | - | 156 | WP_001443235.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP68_RS14375 (2935637) | 2935637..2936026 | - | 390 | WP_001556926.1 | hypothetical protein | - |
| QJP68_RS14380 (2936023) | 2936023..2936199 | - | 177 | WP_000753058.1 | hypothetical protein | - |
| QJP68_RS14385 (2936192) | 2936192..2936374 | - | 183 | WP_001224662.1 | hypothetical protein | - |
| QJP68_RS14390 (2936468) | 2936468..2936824 | - | 357 | WP_000403778.1 | hypothetical protein | - |
| QJP68_RS14395 (2936802) | 2936802..2936945 | - | 144 | WP_000207966.1 | hypothetical protein | - |
| QJP68_RS14400 (2936956) | 2936956..2937219 | - | 264 | WP_000224233.1 | hypothetical protein | - |
| QJP68_RS14405 (2937221) | 2937221..2937439 | - | 219 | WP_001610644.1 | DUF4014 family protein | - |
| QJP68_RS14410 (2937472) | 2937472..2937684 | - | 213 | WP_000072553.1 | hypothetical protein | - |
| QJP68_RS14415 (2937790) | 2937790..2938212 | - | 423 | Protein_2834 | DUF977 family protein | - |
| QJP68_RS14420 (2938228) | 2938228..2938998 | - | 771 | WP_000450998.1 | DUF1627 domain-containing protein | - |
| QJP68_RS14425 (2939020) | 2939020..2939766 | - | 747 | WP_000788950.1 | IS21 family transposase ISAba8 | Transposase |
| QJP68_RS14430 (2939773) | 2939773..2940735 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP68_RS14435 (2940758) | 2940758..2941183 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP68_RS14440 (2941180) | 2941180..2941482 | - | 303 | WP_001556930.1 | transcriptional regulator | - |
| QJP68_RS14445 (2941580) | 2941580..2941951 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP68_RS14450 (2941972) | 2941972..2942163 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP68_RS14455 (2942165) | 2942165..2942443 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP68_RS14460 (2942734) | 2942734..2942886 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP68_RS14465 (2942898) | 2942898..2943236 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP68_RS14470 (2943225) | 2943225..2943419 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP68_RS14475 (2943995) | 2943995..2944183 | + | 189 | WP_000449175.1 | cell division inhibition protein DicB | - |
| QJP68_RS14480 (2944180) | 2944180..2944368 | + | 189 | WP_000199475.1 | DUF1482 family protein | - |
| QJP68_RS14485 (2944461) | 2944461..2946899 | + | 2439 | WP_000102132.1 | exonuclease | - |
| QJP68_RS14490 (2946961) | 2946961..2947230 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP68_RS14495 (2947199) | 2947199..2948317 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP68_RS14500 (2948484) | 2948484..2949278 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP68_RS14505 (2949275) | 2949275..2950321 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP68_RS14510 (2950379) | 2950379..2950840 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP68_RS14515 (2950837) | 2950837..2951625 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP68_RS14520 (2951763) | 2951763..2952584 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP68_RS14525 (2952600) | 2952600..2953511 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP68_RS14530 (2953540) | 2953540..2954784 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP68_RS14535 (2954784) | 2954784..2955485 | - | 702 | WP_001033695.1 | hypothetical protein | VF |
| QJP68_RS14540 (2955478) | 2955478..2956677 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJP68_RS14545 (2956938) | 2956938..2958011 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|