MGE detailed information
MGE type: Prophage MGE length: 81643 bp
Accession: NZ_CP124475 Location: 2225061..2306703 Organism: Escherichia coli strain AVS0969 Replicon: chromosome
Accession: NZ_CP124475 Location: 2225061..2306703 Organism: Escherichia coli strain AVS0969 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP78_RS10925 () | 2222109..2223080 | - | 972 | WP_000564759.1 | tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB | - |
| QJP78_RS10930 () | 2223077..2223820 | - | 744 | WP_000019588.1 | carboxy-S-adenosyl-L-methionine synthase CmoA | - |
| QJP78_RS10935 () | 2223861..2224256 | - | 396 | WP_000252980.1 | MAPEG family protein | - |
| QJP78_RS10940 () | 2224309..2225079 | - | 771 | WP_042040108.1 | DUF72 domain-containing protein | - |
| QJP78_RS10945 () | 2225061..2226374 | - | 1314 | WP_000362005.1 | Putative defective protein IntQ ; Integrase | Integrase |
| QJP78_RS10950 () | 2226430..2226666 | - | 237 | WP_000528718.1 | excisionase family protein | - |
| QJP78_RS10955 () | 2226675..2226821 | - | 147 | WP_001030156.1 | hypothetical protein | - |
| QJP78_RS10960 () | 2226825..2227067 | - | 243 | WP_000457723.1 | DUF4222 domain-containing protein | - |
| QJP78_RS10965 () | 2227152..2227496 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP78_RS10970 () | 2227493..2227660 | - | 168 | WP_021519727.1 | hypothetical protein | - |
| QJP78_RS10975 () | 2227671..2227934 | - | 264 | WP_000224227.1 | hypothetical protein | - |
| QJP78_RS10980 () | 2228221..2228346 | - | 126 | Protein_2147 | hypothetical protein | - |
| QJP78_RS10985 () | 2228348..2229163 | - | 816 | WP_021553029.1 | ead/Ea22-like family protein | - |
| QJP78_RS10990 () | 2229150..2229464 | - | 315 | WP_021519724.1 | hypothetical protein | - |
| QJP78_RS10995 () | 2229418..2229735 | - | 318 | WP_000179800.1 | DUF4752 family protein | - |
| QJP78_RS11000 () | 2229984..2230565 | - | 582 | WP_001199104.1 | hypothetical protein | - |
| QJP78_RS11005 () | 2230571..2230771 | - | 201 | WP_000553975.1 | hypothetical protein | - |
| QJP78_RS11010 () | 2230966..2231172 | - | 207 | WP_033879711.1 | hypothetical protein | - |
| QJP78_RS11015 () | 2231460..2231963 | - | 504 | WP_000608404.1 | helix-turn-helix domain-containing protein | - |
| QJP78_RS11020 () | 2232067..2232723 | - | 657 | WP_000838350.1 | S24 family peptidase | - |
| QJP78_RS11025 () | 2232835..2233062 | + | 228 | WP_000177358.1 | hypothetical protein | - |
| QJP78_RS11030 () | 2233059..2233766 | + | 708 | WP_001090259.1 | Rha family transcriptional regulator | - |
| QJP78_RS11035 () | 2233875..2234537 | + | 663 | WP_029700954.1 | ash family protein | - |
| QJP78_RS11040 () | 2234534..2235193 | + | 660 | WP_162032218.1 | ash family protein | - |
| QJP78_RS11045 () | 2235190..2236041 | + | 852 | WP_029700955.1 | Rha family phage regulatory protein | - |
| QJP78_RS11050 () | 2236038..2236232 | + | 195 | WP_000626793.1 | hypothetical protein | - |
| QJP78_RS11055 () | 2236229..2236453 | + | 225 | WP_000618007.1 | hypothetical protein | - |
| QJP78_RS11060 () | 2236450..2236749 | + | 300 | WP_000995578.1 | hypothetical protein | - |
| QJP78_RS11065 () | 2236746..2237732 | + | 987 | WP_000092417.1 | hypothetical protein | - |
| QJP78_RS11070 () | 2237743..2238642 | + | 900 | WP_000988266.1 | ATP-binding protein | - |
| QJP78_RS11075 () | 2238639..2240039 | + | 1401 | WP_032183441.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| QJP78_RS11080 () | 2240036..2240293 | + | 258 | WP_001065350.1 | hypothetical protein | - |
| QJP78_RS11085 () | 2240345..2241334 | + | 990 | WP_115747593.1 | DUF968 domain-containing protein | - |
| QJP78_RS11090 () | 2241352..2241744 | + | 393 | WP_001204795.1 | antiterminator Q family protein | - |
| QJP78_RS11095 () | 2241811..2242428 | + | 618 | WP_097485802.1 | hypothetical protein | - |
| QJP78_RS11100 () | 2242662..2242859 | + | 198 | WP_000917751.1 | hypothetical protein | - |
| QJP78_RS11105 () | 2243011..2244060 | + | 1050 | WP_160378318.1 | site-specific DNA-methyltransferase | - |
| QJP78_RS11125 () | 2244464..2244580 | - | 117 | Protein_2173 | hypothetical protein | - |
| QJP78_RS11130 () | 2244849..2246705 | + | 1857 | WP_076797516.1 | SASA family carbohydrate esterase | - |
| QJP78_RS11135 () | 2246856..2247071 | + | 216 | WP_000284510.1 | class II holin family protein | - |
| QJP78_RS11140 () | 2247076..2247420 | + | 345 | WP_000731267.1 | YdfR family protein | - |
| QJP78_RS11145 () | 2247471..2248004 | + | 534 | WP_024239084.1 | lysozyme | - |
| QJP78_RS11150 () | 2248303..2248770 | + | 468 | WP_033879567.1 | lysis protein | - |
| QJP78_RS11155 () | 2249259..2249504 | + | 246 | WP_000122986.1 | hypothetical protein | - |
| QJP78_RS11160 () | 2249770..2250315 | + | 546 | WP_021550745.1 | terminase small subunit | - |
| QJP78_RS11165 () | 2250290..2252215 | + | 1926 | WP_021544891.1 | phage terminase large subunit family protein | - |
| QJP78_RS11170 () | 2252212..2252418 | + | 207 | WP_000198149.1 | gpW family protein | - |
| QJP78_RS11175 () | 2252415..2254016 | + | 1602 | WP_001535134.1 | phage portal protein | - |
| QJP78_RS11180 () | 2253997..2255316 | + | 1320 | WP_125134121.1 | S49 family peptidase | - |
| QJP78_RS11185 () | 2255326..2255658 | + | 333 | WP_125134120.1 | head decoration protein | - |
| QJP78_RS11190 () | 2255714..2256739 | + | 1026 | WP_125134119.1 | major capsid protein | - |
| QJP78_RS11195 () | 2256781..2257179 | + | 399 | WP_125134118.1 | DNA-packaging protein FI | - |
| QJP78_RS11200 () | 2257191..2257544 | + | 354 | WP_000752996.1 | head-tail joining protein | - |
| QJP78_RS11205 () | 2257556..2258134 | + | 579 | WP_000975065.1 | phage tail protein | - |
| QJP78_RS11210 () | 2258131..2258526 | + | 396 | WP_125134117.1 | phage minor tail U family protein | - |
| QJP78_RS11215 () | 2258534..2259274 | + | 741 | WP_283184719.1 | phage tail protein | - |
| QJP78_RS11220 () | 2259290..2259712 | + | 423 | WP_283184720.1 | phage minor tail protein G | - |
| QJP78_RS11225 () | 2259694..2260128 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| QJP78_RS11230 () | 2260121..2262682 | + | 2562 | WP_125134115.1 | phage tail tape measure protein | - |
| QJP78_RS11235 () | 2262679..2263008 | + | 330 | WP_000847379.1 | phage tail protein | - |
| QJP78_RS11240 () | 2263008..2263706 | + | 699 | WP_125134114.1 | phage minor tail protein L | - |
| QJP78_RS11245 () | 2263712..2264455 | + | 744 | WP_283184723.1 | C40 family peptidase | - |
| QJP78_RS11250 () | 2264452..2265033 | + | 582 | WP_033879560.1 | tail assembly protein | - |
| QJP78_RS11255 () | 2265377..2268850 | + | 3474 | WP_201525774.1 | host specificity protein J | - |
| QJP78_RS11260 () | 2268918..2269517 | + | 600 | WP_103755922.1 | Outer membrane protein X | VF |
| QJP78_RS11265 () | 2269582..2271987 | + | 2406 | WP_103755921.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP78_RS11270 () | 2271987..2272268 | + | 282 | WP_000654160.1 | hypothetical protein | - |
| QJP78_RS11275 () | 2272278..2272982 | + | 705 | WP_000235980.1 | tail fiber domain-containing protein | - |
| QJP78_RS11280 () | 2272993..2273286 | + | 294 | WP_000355609.1 | hypothetical protein | - |
| QJP78_RS11285 () | 2273306..2273425 | + | 120 | Protein_2205 | tail fiber assembly protein | - |
| QJP78_RS11290 () | 2273398..2273544 | + | 147 | WP_001300215.1 | hypothetical protein | - |
| QJP78_RS11295 () | 2273541..2273789 | - | 249 | WP_001217553.1 | DinI-like family protein | - |
| QJP78_RS11300 () | 2274052..2274147 | - | 96 | Protein_2208 | hypothetical protein | - |
| QJP78_RS11305 () | 2274144..2274710 | - | 567 | WP_000891625.1 | hydrolase | - |
| QJP78_RS11310 () | 2275020..2276792 | + | 1773 | WP_001258676.1 | aspartate--tRNA ligase | - |
| QJP78_RS11315 () | 2276785..2277237 | + | 453 | WP_077249130.1 | dihydroneopterin triphosphate diphosphatase | - |
| QJP78_RS11320 () | 2277266..2278006 | + | 741 | WP_000907234.1 | putative transcriptional regulatory protein YebC | VF |
| QJP78_RS11325 () | 2278041..2278562 | + | 522 | WP_001295503.1 | crossover junction endodeoxyribonuclease RuvC | - |
| QJP78_RS11330 () | 2278564..2279166 | - | 603 | WP_001024911.1 | YebB family permuted papain-like enzyme | - |
| QJP78_RS11335 () | 2279237..2279302 | + | 66 | WP_072093883.1 | stress response small protein YobI | - |
| QJP78_RS11340 () | 2279441..2280052 | + | 612 | WP_000580323.1 | Holliday junction branch migration protein RuvA | - |
| QJP78_RS11345 () | 2280061..2281071 | + | 1011 | WP_000568520.1 | Holliday junction branch migration DNA helicase RuvB | - |
| QJP78_RS11350 () | 2281181..2282529 | + | 1349 | WP_099156422.1 | IS3-like element IS1397 family transposase | - |
| QJP78_RS11355 () | 2282723..2283508 | - | 786 | WP_000571478.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| QJP78_RS11360 () | 2283505..2284260 | - | 756 | WP_000202996.1 | Zinc import ATP-binding protein ZnuC | VF |
| QJP78_RS11365 () | 2284339..2285271 | + | 933 | WP_001347089.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| QJP78_RS11370 () | 2285287..2286609 | + | 1323 | WP_001184045.1 | murein DD-endopeptidase MepM | - |
| QJP78_RS11375 () | 2286728..2287699 | + | 972 | WP_001296141.1 | Lipid A biosynthesis myristoyltransferase | VF |
| QJP78_RS11380 () | 2287831..2289273 | - | 1443 | WP_000091149.1 | pyruvate kinase | - |
| QJP78_RS11385 () | 2289401..2290270 | - | 870 | WP_001056695.1 | DNA-binding transcriptional regulator HexR | - |
| QJP78_RS11390 () | 2290608..2292083 | + | 1476 | WP_000301727.1 | glucose-6-phosphate dehydrogenase | - |
| QJP78_RS11395 () | 2292318..2294129 | + | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| QJP78_RS11400 () | 2294166..2294807 | + | 642 | WP_000800503.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| QJP78_RS11405 () | 2294863..2296041 | - | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QJP78_RS11410 () | 2296175..2296465 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QJP78_RS11415 () | 2296532..2296888 | + | 357 | WP_001295500.1 | protein YebF | - |
| QJP78_RS11420 () | 2297215..2297874 | + | 660 | WP_000024724.1 | tellurite resistance TerB family protein | - |
| QJP78_RS11425 () | 2298083..2300143 | + | 2061 | WP_000936925.1 | oligopeptidase B | - |
| QJP78_RS11430 () | 2300140..2300802 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QJP78_RS11435 () | 2300826..2301482 | - | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QJP78_RS11440 () | 2301584..2301814 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QJP78_RS11445 () | 2301953..2302327 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| QJP78_RS11450 () | 2302331..2303203 | + | 873 | WP_000879317.1 | copper homeostasis membrane protein CopD | - |
| QJP78_RS11455 () | 2303216..2303557 | + | 342 | WP_000976472.1 | YebY family protein | - |
| - | 2303587..2303855 | - | 269 | - | - | Antitoxin Detail |
| - | 2303715..2303817 | + | 103 | - | - | Toxin Detail |
| QJP78_RS11460 () | 2303952..2304608 | + | 657 | WP_000812745.1 | protein-serine/threonine phosphatase | - |
| QJP78_RS11465 () | 2304609..2304800 | - | 192 | WP_001296140.1 | YebW family protein | - |
| QJP78_RS11470 () | 2304905..2305141 | - | 237 | WP_001295499.1 | YebV family protein | - |
| QJP78_RS11475 () | 2305258..2306697 | - | 1440 | WP_001296139.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QJP78_RS11480 () | 2306777..2309410 | - | 2634 | WP_001298452.1 | lipid-binding membrane homeostasis protein YebT | - |
| QJP78_RS11485 () | 2309379..2310662 | - | 1284 | WP_001531756.1 | membrane integrity lipid transport subunit YebS | - |
| QJP78_RS11490 () | 2310792..2311289 | + | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|