MGE detailed information
MGE type: Prophage MGE length: 61501 bp
Accession: NZ_CP124475 Location: 1905626..1967126 Organism: Escherichia coli strain AVS0969 Replicon: chromosome
Accession: NZ_CP124475 Location: 1905626..1967126 Organism: Escherichia coli strain AVS0969 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP78_RS09035 (1901110) | 1901110..1902039 | + | 930 | WP_000803366.1 | LysR substrate-binding domain-containing protein | - |
| QJP78_RS09040 (1902254) | 1902254..1902316 | + | 63 | WP_010723108.1 | membrane protein YoeI | - |
| QJP78_RS09045 (1902306) | 1902306..1903664 | + | 1359 | WP_000019194.1 | putrescine/proton symporter PlaP | - |
| QJP78_RS09050 (1903738) | 1903738..1905162 | - | 1425 | WP_094327106.1 | exodeoxyribonuclease I | - |
| QJP78_RS09055 (1905344) | 1905344..1906522 | + | 1179 | WP_283184713.1 | hypothetical protein ; Integrase | Integrase |
| QJP78_RS09060 (1906503) | 1906503..1906694 | - | 192 | WP_000132739.1 | AlpA family phage regulatory protein | - |
| QJP78_RS09065 (1906772) | 1906772..1907116 | - | 345 | WP_073464407.1 | hypothetical protein | - |
| QJP78_RS09070 (1907144) | 1907144..1907311 | - | 168 | WP_283184714.1 | hypothetical protein | - |
| QJP78_RS09075 (1907395) | 1907395..1907823 | - | 429 | WP_016262220.1 | DUF2513 domain-containing protein | - |
| QJP78_RS09080 (1907852) | 1907852..1908190 | - | 339 | Protein_1779 | hypothetical protein | - |
| QJP78_RS09085 (1908484) | 1908484..1909098 | - | 615 | WP_000748282.1 | hypothetical protein | - |
| QJP78_RS09090 (1909430) | 1909430..1909783 | - | 354 | Protein_1781 | ead/Ea22-like family protein | - |
| QJP78_RS09095 (1909770) | 1909770..1910087 | - | 318 | WP_136753588.1 | hypothetical protein | - |
| QJP78_RS09100 (1910084) | 1910084..1910533 | - | 450 | WP_283184715.1 | hypothetical protein | - |
| QJP78_RS09105 (1910530) | 1910530..1910694 | - | 165 | WP_001214456.1 | DUF2737 family protein | - |
| QJP78_RS09110 (1910705) | 1910705..1910998 | - | 294 | WP_001735525.1 | DUF2856 family protein | - |
| QJP78_RS09115 (1911022) | 1911022..1911405 | - | 384 | WP_001735524.1 | hypothetical protein | - |
| QJP78_RS09120 (1911405) | 1911405..1912010 | - | 606 | WP_283184716.1 | ERF family protein | - |
| QJP78_RS09125 (1912021) | 1912021..1912191 | - | 171 | WP_000050554.1 | hypothetical protein | - |
| QJP78_RS09130 (1912267) | 1912267..1912419 | - | 153 | WP_001243355.1 | host cell division inhibitory peptide Kil | - |
| QJP78_RS09135 (1912763) | 1912763..1913386 | - | 624 | WP_283184717.1 | Nmad5 family putative nucleotide modification protein | - |
| QJP78_RS09140 (1913665) | 1913665..1913856 | - | 192 | Protein_1791 | antitermination protein N | - |
| QJP78_RS09145 (1914201) | 1914201..1914752 | - | 552 | WP_000990548.1 | hypothetical protein | - |
| QJP78_RS09150 (1914759) | 1914759..1915040 | - | 282 | WP_032153680.1 | hypothetical protein | - |
| QJP78_RS09155 (1915163) | 1915163..1915876 | - | 714 | WP_001274760.1 | LexA family transcriptional regulator | - |
| QJP78_RS09160 (1915977) | 1915977..1916177 | + | 201 | WP_000437875.1 | Cro/CI family transcriptional regulator | - |
| QJP78_RS09165 (1916296) | 1916296..1916589 | + | 294 | WP_000251073.1 | lambda phage CII family protein | - |
| QJP78_RS09170 (1916622) | 1916622..1916783 | + | 162 | WP_000166961.1 | hypothetical protein | - |
| QJP78_RS09175 (1916770) | 1916770..1917591 | + | 822 | WP_001608293.1 | replication protein | - |
| QJP78_RS09180 (1917588) | 1917588..1918964 | + | 1377 | WP_283184718.1 | replicative DNA helicase | - |
| QJP78_RS09185 (1919037) | 1919037..1919243 | + | 207 | WP_000818845.1 | hypothetical protein | - |
| QJP78_RS09190 (1919251) | 1919251..1919697 | + | 447 | WP_010379768.1 | recombination protein NinB | - |
| QJP78_RS09195 (1919694) | 1919694..1920221 | + | 528 | WP_000153306.1 | phage N-6-adenine-methyltransferase | - |
| QJP78_RS09200 (1920218) | 1920218..1920394 | + | 177 | WP_001254255.1 | NinE family protein | - |
| QJP78_RS09205 (1920397) | 1920397..1920780 | + | 384 | WP_000386649.1 | DUF2591 family protein | - |
| QJP78_RS09210 (1920773) | 1920773..1920949 | + | 177 | WP_034169235.1 | protein NinF | - |
| QJP78_RS09215 (1920942) | 1920942..1921664 | + | 723 | WP_260232531.1 | DNA-binding protein | - |
| QJP78_RS09220 (1921664) | 1921664..1922269 | + | 606 | WP_194178753.1 | recombination protein NinG | - |
| QJP78_RS09225 (1922266) | 1922266..1922472 | + | 207 | WP_000144614.1 | phage NinH family protein | - |
| QJP78_RS09230 (1922450) | 1922450..1923115 | + | 666 | WP_187202214.1 | metallophosphoesterase | - |
| QJP78_RS09235 (1923112) | 1923112..1923735 | + | 624 | WP_001235461.1 | antitermination protein | - |
| QJP78_RS09240 (1924175) | 1924175..1924498 | + | 324 | WP_000783734.1 | phage holin, lambda family | - |
| QJP78_RS09245 (1924482) | 1924482..1924958 | + | 477 | WP_097486938.1 | glycoside hydrolase family protein | - |
| QJP78_RS09250 (1924955) | 1924955..1925392 | + | 438 | WP_135258051.1 | lysis protein | - |
| QJP78_RS09255 (1925591) | 1925591..1926088 | + | 498 | WP_000644480.1 | KilA-N domain-containing protein | - |
| QJP78_RS09260 (1926085) | 1926085..1926342 | + | 258 | WP_272479776.1 | hypothetical protein | - |
| QJP78_RS09265 (1927233) | 1927233..1927478 | + | 246 | WP_000122986.1 | hypothetical protein | - |
| QJP78_RS09270 (1927744) | 1927744..1928289 | + | 546 | WP_021550745.1 | terminase small subunit | - |
| QJP78_RS09275 (1928264) | 1928264..1930189 | + | 1926 | WP_021544891.1 | phage terminase large subunit family protein | - |
| QJP78_RS09280 (1930186) | 1930186..1930392 | + | 207 | WP_000198149.1 | gpW family protein | - |
| QJP78_RS09285 (1930389) | 1930389..1931990 | + | 1602 | WP_001535134.1 | phage portal protein | - |
| QJP78_RS09290 (1931971) | 1931971..1933290 | + | 1320 | WP_125134121.1 | S49 family peptidase | - |
| QJP78_RS09295 (1933300) | 1933300..1933632 | + | 333 | WP_125134120.1 | head decoration protein | - |
| QJP78_RS09300 (1933688) | 1933688..1934713 | + | 1026 | WP_125134119.1 | major capsid protein | - |
| QJP78_RS09305 (1934755) | 1934755..1935153 | + | 399 | WP_125134118.1 | DNA-packaging protein FI | - |
| QJP78_RS09310 (1935165) | 1935165..1935518 | + | 354 | WP_000752996.1 | head-tail joining protein | - |
| QJP78_RS09315 (1935530) | 1935530..1936108 | + | 579 | WP_000975065.1 | phage tail protein | - |
| QJP78_RS09320 (1936105) | 1936105..1936500 | + | 396 | WP_125134117.1 | phage minor tail U family protein | - |
| QJP78_RS09325 (1936508) | 1936508..1937248 | + | 741 | WP_283184719.1 | phage tail protein | - |
| QJP78_RS09330 (1937264) | 1937264..1937686 | + | 423 | WP_283184720.1 | phage minor tail protein G | - |
| QJP78_RS09335 (1937668) | 1937668..1938102 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| QJP78_RS09340 (1938095) | 1938095..1940656 | + | 2562 | WP_125134115.1 | phage tail tape measure protein | - |
| QJP78_RS09345 (1940653) | 1940653..1940982 | + | 330 | WP_000847379.1 | phage tail protein | - |
| QJP78_RS09350 (1940982) | 1940982..1941680 | + | 699 | WP_125134114.1 | phage minor tail protein L | - |
| QJP78_RS09355 (1941686) | 1941686..1942429 | + | 744 | WP_225393528.1 | C40 family peptidase | - |
| QJP78_RS09360 (1942426) | 1942426..1942998 | + | 573 | WP_010357081.1 | tail assembly protein | - |
| QJP78_RS09365 (1943059) | 1943059..1946541 | + | 3483 | WP_125134113.1 | host specificity protein J | - |
| QJP78_RS09370 (1946600) | 1946600..1948657 | + | 2058 | WP_125134112.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP78_RS09375 (1948654) | 1948654..1948932 | + | 279 | WP_000654168.1 | hypothetical protein | - |
| QJP78_RS09380 (1948945) | 1948945..1949232 | + | 288 | WP_033868794.1 | hypothetical protein | - |
| QJP78_RS09385 (1949588) | 1949588..1950478 | - | 891 | WP_000735931.1 | HNH endonuclease | - |
| QJP78_RS09390 (1950475) | 1950475..1952052 | - | 1578 | WP_000889231.1 | AAA family ATPase | - |
| QJP78_RS09395 (1953258) | 1953258..1954424 | + | 1167 | WP_001296209.1 | serine-type D-Ala-D-Ala carboxypeptidase DacD | - |
| QJP78_RS09400 (1954543) | 1954543..1955016 | + | 474 | WP_001105376.1 | DNA gyrase inhibitor SbmC | - |
| QJP78_RS09405 (1955214) | 1955214..1956272 | + | 1059 | WP_001200894.1 | FUSC family protein | - |
| QJP78_RS09410 (1956444) | 1956444..1956773 | + | 330 | WP_000450409.1 | DUF496 family protein | - |
| QJP78_RS09415 (1956874) | 1956874..1957197 | - | 324 | WP_223216378.1 | EutP/PduV family microcompartment system protein | - |
| QJP78_RS09420 (1957176) | 1957176..1957256 | + | 81 | WP_023441679.1 | hypothetical protein | - |
| QJP78_RS09425 (1957467) | 1957467..1959008 | + | 1542 | WP_001298859.1 | IS21 family transposase ISEc12 | Transposase |
| QJP78_RS09430 (1959023) | 1959023..1959769 | + | 747 | WP_001016257.1 | IS21 family transposase ISEc12 | Transposase |
| QJP78_RS09435 (1960132) | 1960132..1960212 | - | 81 | Protein_1850 | hypothetical protein | - |
| QJP78_RS09440 (1960258) | 1960258..1960452 | - | 195 | WP_000988601.1 | DUF5983 family protein | - |
| QJP78_RS09445 (1960449) | 1960449..1960823 | - | 375 | WP_000854814.1 | type IV toxin-antitoxin system cytoskeleton-binding toxin CbtA | Toxin Detail |
| QJP78_RS09450 (1960912) | 1960912..1961280 | - | 369 | WP_001546021.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| QJP78_RS09455 (1961360) | 1961360..1961581 | - | 222 | WP_000692323.1 | DUF987 domain-containing protein | - |
| QJP78_RS09460 (1961644) | 1961644..1962120 | - | 477 | WP_001186773.1 | RadC family protein | - |
| QJP78_RS09465 (1962136) | 1962136..1962609 | - | 474 | WP_001385393.1 | antirestriction protein | - |
| QJP78_RS09470 (1962873) | 1962873..1963694 | - | 822 | WP_213848171.1 | DUF932 domain-containing protein | - |
| QJP78_RS09475 (1963915) | 1963915..1964325 | - | 411 | WP_000846704.1 | hypothetical protein | - |
| QJP78_RS09480 (1964341) | 1964341..1965018 | - | 678 | WP_001362823.1 | hypothetical protein | - |
| QJP78_RS09485 (1965154) | 1965154..1966224 | - | 1071 | WP_000102631.1 | patatin-like phospholipase family protein | - |
| QJP78_RS09490 (1966221) | 1966221..1967126 | - | 906 | WP_000203550.1 | diguanylate cyclase regulator RdcB family protein | - |
| QJP78_RS09495 (1967123) | 1967123..1969507 | - | 2385 | WP_000544739.1 | dynamin family protein | - |
| QJP78_RS09500 (1969725) | 1969725..1970159 | - | 435 | WP_001069647.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|