MGE detailed information
MGE type: Conjugative plasmid MGE length: 91072 bp
Accession: NZ_CP124474 Location: 1..91072 Organism: Escherichia coli strain AVS0973 Replicon: plasmid pAVS0973-C
Accession: NZ_CP124474 Location: 1..91072 Organism: Escherichia coli strain AVS0973 Replicon: plasmid pAVS0973-C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP95_RS25585 (46) | 46..1077 | + | 1032 | WP_000907869.1 | plasmid replication initiator RepA | - |
| QJP95_RS25590 (2147) | 2147..2656 | - | 510 | WP_000045395.1 | hypothetical protein | - |
| QJP95_RS25595 (2712) | 2712..3314 | - | 603 | WP_000517687.1 | ProQ/FINO family protein | - |
| QJP95_RS25600 (3667) | 3667..5013 | + | 1347 | WP_001132021.1 | protein YagA | - |
| QJP95_RS25605 (5501) | 5501..8284 | - | 2784 | Protein_4 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP95_RS25610 (8349) | 8349..8642 | + | 294 | WP_116961751.1 | WbuC family cupin fold metalloprotein | - |
| QJP95_RS25615 (8689) | 8689..9564 | - | 876 | WP_000239590.1 | Beta-lactamase CTX-M-1 | ARG |
| QJP95_RS25620 (9820) | 9820..11082 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QJP95_RS25625 (11264) | 11264..11482 | - | 219 | WP_001143771.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP95_RS25630 (11646) | 11646..12203 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| QJP95_RS25635 (12386) | 12386..13246 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| QJP95_RS25640 (13515) | 13515..13817 | - | 303 | WP_001245884.1 | hypothetical protein | - |
| QJP95_RS25645 (13814) | 13814..14440 | - | 627 | WP_000587689.1 | ParA family plasmid-partitioning AAA ATPase | - |
| QJP95_RS25650 (14636) | 14636..15906 | - | 1271 | Protein_13 | Y-family DNA polymerase | - |
| QJP95_RS25655 (15906) | 15906..16343 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QJP95_RS25660 (16340) | 16340..16588 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QJP95_RS25665 (17006) | 17006..17908 | + | 903 | WP_077759229.1 | DUF1281 domain-containing protein | - |
| QJP95_RS25670 (17905) | 17905..18216 | + | 312 | WP_001310011.1 | hypothetical protein | - |
| QJP95_RS25675 (18293) | 18293..18976 | + | 684 | WP_000086153.1 | DNA methylase | - |
| QJP95_RS25680 (18977) | 18977..19198 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| QJP95_RS25685 (19212) | 19212..19646 | + | 435 | WP_000274412.1 | DUF1380 family protein | - |
| QJP95_RS25690 (19692) | 19692..20468 | + | 777 | WP_001005022.1 | hypothetical protein | - |
| QJP95_RS25695 (20882) | 20882..21307 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| QJP95_RS25700 (21354) | 21354..21776 | + | 423 | WP_033554663.1 | DUF1380 family protein | - |
| QJP95_RS25705 (21773) | 21773..21964 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| QJP95_RS25710 (22035) | 22035..22349 | + | 315 | WP_005112260.1 | hypothetical protein | - |
| QJP95_RS25715 (22733) | 22733..23260 | + | 528 | WP_001276120.1 | single-stranded DNA-binding protein | - |
| QJP95_RS25720 (23318) | 23318..23551 | + | 234 | WP_000006020.1 | DUF905 domain-containing protein | - |
| QJP95_RS25725 (23610) | 23610..25568 | + | 1959 | WP_283192219.1 | ParB/RepB/Spo0J family partition protein | - |
| QJP95_RS25730 (25623) | 25623..26057 | + | 435 | WP_001387500.1 | conjugation system SOS inhibitor PsiB | - |
| QJP95_RS25735 (26054) | 26054..26773 | + | 720 | WP_001276270.1 | plasmid SOS inhibition protein A | - |
| QJP95_RS25740 (26770) | 26770..27366 | + | 597 | WP_000977995.1 | hypothetical protein | - |
| QJP95_RS25745 (27828) | 27828..28328 | + | 501 | WP_000117611.1 | antirestriction protein ArdA | - |
| QJP95_RS25750 (29057) | 29057..29491 | + | 435 | WP_000218858.1 | hypothetical protein | - |
| QJP95_RS25755 (29585) | 29585..29851 | + | 267 | WP_000804663.1 | hypothetical protein | - |
| QJP95_RS25760 (30028) | 30028..30417 | + | 390 | WP_000833767.1 | hypothetical protein | - |
| QJP95_RS25765 (30414) | 30414..31328 | + | 915 | WP_000038348.1 | ISNCY family transposase ISRor2 | VF |
| QJP95_RS25770 (31390) | 31390..31596 | + | 207 | WP_000150314.1 | hypothetical protein | VF |
| QJP95_RS25775 (31627) | 31627..31878 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QJP95_RS25780 (32458) | 32458..33306 | + | 849 | WP_001077053.1 | DUF4942 domain-containing protein | - |
| QJP95_RS25785 (33393) | 33393..33728 | - | 336 | WP_000157095.1 | molybdopterin-guanine dinucleotide biosynthesis protein MobC | - |
| QJP95_RS25790 (33962) | 33962..34294 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QJP95_RS25795 (34305) | 34305..37004 | + | 2700 | WP_001387486.1 | hypothetical protein | Relaxase |
| QJP95_RS25800 (37041) | 37041..39332 | - | 2292 | WP_001289278.1 | F-type conjugative transfer protein TrbC | - |
| QJP95_RS25805 (39325) | 39325..40395 | - | 1071 | WP_000151588.1 | IncI1-type conjugal transfer protein TrbB | - |
| QJP95_RS25810 (40414) | 40414..41622 | - | 1209 | WP_000121263.1 | hypothetical protein | VF |
| QJP95_RS25815 (41929) | 41929..42708 | - | 780 | WP_275450201.1 | protein FinQ | - |
| - (43223) | 43223..43285 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (43223) | 43223..43285 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (43223) | 43223..43285 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| - (43223) | 43223..43285 | - | 63 | NuclAT_0 | - | Antitoxin Detail |
| QJP95_RS25820 (43335) | 43335..43487 | + | 153 | WP_001387489.1 | Hok/Gef family protein | Toxin Detail |
| QJP95_RS25825 (43559) | 43559..43810 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| QJP95_RS25830 (44311) | 44311..44406 | + | 96 | WP_000609148.1 | DinQ-like type I toxin DqlB | - |
| QJP95_RS25835 (44471) | 44471..44647 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| QJP95_RS25840 (44830) | 44830..45039 | - | 210 | WP_001140543.1 | hemolysin expression modulator Hha | - |
| QJP95_RS25845 (45137) | 45137..45751 | - | 615 | WP_000578648.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QJP95_RS25850 (45827) | 45827..47995 | - | 2169 | WP_000698360.1 | IncI1-type conjugal transfer membrane protein TraY | - |
| QJP95_RS25855 (48092) | 48092..48676 | - | 585 | WP_001037983.1 | IncI1-type conjugal transfer protein TraX | - |
| QJP95_RS25860 (48705) | 48705..49907 | - | 1203 | WP_001387490.1 | IncI1-type conjugal transfer protein TraW | - |
| QJP95_RS25865 (49874) | 49874..50488 | - | 615 | WP_000337395.1 | IncI1-type conjugal transfer protein TraV | - |
| QJP95_RS25870 (50549) | 50549..52162 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP95_RS25875 (52193) | 52193..52543 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP95_RS25880 (52540) | 52540..52965 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP95_RS25885 (52980) | 52980..56072 | - | 3093 | WP_283192216.1 | IncI1-type conjugal transfer protein TraU | - |
| QJP95_RS25890 (56162) | 56162..56962 | - | 801 | WP_001164783.1 | IncI1-type conjugal transfer protein TraT | - |
| QJP95_RS25895 (56946) | 56946..57134 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| QJP95_RS25900 (57198) | 57198..57602 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| QJP95_RS25905 (57653) | 57653..58180 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QJP95_RS25910 (58180) | 58180..58884 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| QJP95_RS25915 (58884) | 58884..60173 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| QJP95_RS25920 (60176) | 60176..61159 | - | 984 | WP_001191879.1 | hypothetical protein | VF |
| QJP95_RS25925 (61170) | 61170..61862 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QJP95_RS25930 (61859) | 61859..62206 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QJP95_RS25935 (62224) | 62224..65988 | - | 3765 | WP_001141540.1 | DUF5710 domain-containing protein | - |
| QJP95_RS25940 (66078) | 66078..66629 | - | 552 | WP_000014586.1 | Phospholipase D | VF |
| QJP95_RS25945 (66644) | 66644..66934 | - | 291 | WP_001314267.1 | hypothetical protein | - |
| QJP95_RS25950 (66931) | 66931..68079 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QJP95_RS25955 (68076) | 68076..68894 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| QJP95_RS25960 (68891) | 68891..69349 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QJP95_RS25965 (69744) | 69744..70328 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QJP95_RS25970 (70388) | 70388..71590 | - | 1203 | WP_000976357.1 | conjugal transfer protein TraF | - |
| QJP95_RS25975 (71676) | 71676..72500 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| QJP95_RS25980 (72651) | 72651..73805 | - | 1155 | WP_001139956.1 | site-specific integrase | - |
| QJP95_RS25985 (73804) | 73804..74088 | + | 285 | WP_187642572.1 | pilus assembly protein PilV | - |
| QJP95_RS25990 (75728) | 75728..76873 | - | 1146 | WP_283192217.1 | hypothetical protein | VF |
| QJP95_RS25995 (76861) | 76861..77517 | - | 657 | WP_001193549.1 | hypothetical protein | VF |
| QJP95_RS26000 (77502) | 77502..78062 | - | 561 | WP_000014005.1 | hypothetical protein | VF |
| QJP95_RS26005 (78072) | 78072..78686 | - | 615 | WP_000908227.1 | hypothetical protein | VF |
| QJP95_RS26010 (78703) | 78703..79788 | - | 1086 | WP_001208802.1 | hypothetical protein | VF |
| QJP95_RS26015 (79801) | 79801..81354 | - | 1554 | WP_000362206.1 | hypothetical protein | VF |
| QJP95_RS26020 (81365) | 81365..81817 | - | 453 | WP_001247337.1 | hypothetical protein | VF |
| QJP95_RS26025 (81804) | 81804..83099 | - | 1296 | WP_000752782.1 | type 4b pilus protein PilO2 | - |
| QJP95_RS26030 (83092) | 83092..84774 | - | 1683 | WP_283192218.1 | hypothetical protein | VF |
| QJP95_RS26035 (84788) | 84788..85225 | - | 438 | WP_000539806.1 | hypothetical protein | VF |
| QJP95_RS26040 (85225) | 85225..86292 | - | 1068 | WP_001360287.1 | hypothetical protein | VF |
| QJP95_RS26045 (87339) | 87339..87593 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QJP95_RS26050 (87765) | 87765..88448 | - | 684 | WP_000213862.1 | conjugal transfer protein TraC | - |
| QJP95_RS26055 (88702) | 88702..89235 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QJP95_RS26060 (89677) | 89677..89964 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| QJP95_RS26065 (90002) | 90002..90160 | - | 159 | Protein_96 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|