MGE detailed information
MGE type: Conjugative plasmid MGE length: 109429 bp
Accession: NZ_CP124468 Location: 1..109429 Organism: Escherichia coli strain AVS0747 Replicon: plasmid pAVS0747-A
Accession: NZ_CP124468 Location: 1..109429 Organism: Escherichia coli strain AVS0747 Replicon: plasmid pAVS0747-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB08_RS23790 (46) | 46..1077 | + | 1032 | WP_000907870.1 | plasmid replication initiator RepA | - |
| QJB08_RS23795 (2100) | 2100..3308 | - | 1209 | WP_000198533.1 | IS91 family transposase ISSbo1 | Transposase |
| QJB08_RS23800 (3289) | 3289..3561 | - | 273 | WP_000019163.1 | hypothetical protein | - |
| QJB08_RS23805 (3638) | 3638..4837 | - | 1200 | Protein_3 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| QJB08_RS23810 (4841) | 4841..5233 | + | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| QJB08_RS23815 (5371) | 5371..6255 | + | 885 | WP_000058717.1 | EamA family transporter | - |
| QJB08_RS23820 (6287) | 6287..7486 | - | 1200 | WP_000804064.1 | Tetracycline resistance protein, class C | ARG |
| QJB08_RS23825 (7592) | 7592..8242 | + | 651 | WP_000164043.1 | tetracycline resistance transcriptional repressor TetR(A) | - |
| QJB08_RS23830 (8274) | 8274..8462 | - | 189 | WP_001191969.1 | hypothetical protein | - |
| QJB08_RS23835 (8469) | 8469..8879 | - | 411 | Protein_9 | recombinase family protein | - |
| QJB08_RS23840 (8944) | 8944..9648 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJB08_RS23845 (9701) | 9701..10456 | + | 756 | Protein_11 | IS110 family transposase IS5075 | Transposase |
| QJB08_RS23850 (10728) | 10728..10814 | - | 87 | Protein_12 | Arm DNA-binding domain-containing protein | - |
| QJB08_RS23855 (11144) | 11144..11959 | + | 816 | WP_001043260.1 | Dihydropteroate synthase | ARG |
| QJB08_RS23860 (12046) | 12046..12288 | + | 243 | Protein_14 | phosphoglucosamine mutase | - |
| QJB08_RS23865 (12524) | 12524..13669 | - | 1146 | Protein_15 | IS91 family transposase ISVsa3 | Transposase |
| QJB08_RS23870 (14027) | 14027..14296 | + | 270 | WP_000079941.1 | type II toxin-antitoxin system antitoxin YacA | Antitoxin Detail |
| QJB08_RS23875 (14296) | 14296..14574 | + | 279 | WP_244442846.1 | type II toxin-antitoxin system toxin YacB | Toxin Detail |
| QJB08_RS23880 (14614) | 14614..15462 | + | 849 | WP_021265674.1 | 3'-5' exonuclease | - |
| QJB08_RS23885 (15579) | 15579..16052 | + | 474 | WP_001334658.1 | hypothetical protein | - |
| QJB08_RS23890 (16529) | 16529..16795 | - | 267 | WP_000955263.1 | hypothetical protein | - |
| QJB08_RS23895 (16795) | 16795..17289 | - | 495 | WP_001459505.1 | hypothetical protein | - |
| QJB08_RS23900 (17345) | 17345..17947 | - | 603 | WP_000517695.1 | ProQ/FINO family protein | - |
| QJB08_RS23905 (18301) | 18301..19647 | + | 1347 | WP_001132032.1 | protein YagA | - |
| QJB08_RS23910 (19926) | 19926..21026 | + | 1101 | Protein_24 | colicin Ia central receptor-binding domain-containing protein | - |
| QJB08_RS23915 (21212) | 21212..22474 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QJB08_RS23920 (22762) | 22762..23637 | + | 876 | WP_013188473.1 | Beta-lactamase CTX-M-1 | ARG |
| QJB08_RS23925 (23684) | 23684..24037 | - | 354 | Protein_27 | WbuC family cupin fold metalloprotein | - |
| QJB08_RS23930 (24275) | 24275..24814 | + | 540 | WP_072740819.1 | colicin-like pore-forming protein | - |
| QJB08_RS23935 (24832) | 24832..25179 | - | 348 | WP_000762570.1 | colicin 1B immunity protein | - |
| QJB08_RS23940 (25298) | 25298..25646 | + | 349 | Protein_30 | DUF6404 family protein | - |
| QJB08_RS23945 (25666) | 25666..26256 | - | 591 | WP_000194553.1 | hypothetical protein | - |
| QJB08_RS23950 (26256) | 26256..26513 | - | 258 | WP_000371888.1 | hypothetical protein | - |
| QJB08_RS23955 (26864) | 26864..27865 | + | 1002 | WP_000774874.1 | DUF4238 domain-containing protein | - |
| QJB08_RS23960 (28041) | 28041..28385 | - | 345 | WP_025653526.1 | hypothetical protein | - |
| QJB08_RS23965 (28884) | 28884..29138 | - | 255 | WP_000678527.1 | hypothetical protein | - |
| QJB08_RS23970 (29183) | 29183..30109 | - | 927 | WP_001290416.1 | hypothetical protein | - |
| QJB08_RS23975 (30641) | 30641..31054 | + | 414 | WP_000465043.1 | hypothetical protein | - |
| QJB08_RS23980 (31056) | 31056..31835 | + | 780 | WP_021537353.1 | site-specific integrase | - |
| QJB08_RS23985 (32015) | 32015..32659 | + | 645 | WP_001144036.1 | ParA family protein | - |
| QJB08_RS23990 (32746) | 32746..33054 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| QJB08_RS23995 (33468) | 33468..34448 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| QJB08_RS24000 (34441) | 34441..34857 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| QJB08_RS24005 (34859) | 34859..36133 | - | 1275 | WP_000457492.1 | Y-family DNA polymerase | - |
| QJB08_RS24010 (36133) | 36133..36570 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| QJB08_RS24015 (36567) | 36567..36815 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| QJB08_RS24020 (37233) | 37233..38135 | + | 903 | WP_000273918.1 | DUF1281 domain-containing protein | - |
| QJB08_RS24025 (38132) | 38132..38443 | + | 312 | WP_010891263.1 | hypothetical protein | - |
| QJB08_RS24030 (38520) | 38520..39203 | + | 684 | WP_000086178.1 | DNA methylase | - |
| QJB08_RS24035 (39204) | 39204..39425 | + | 222 | WP_001104887.1 | hypothetical protein | - |
| QJB08_RS24040 (39385) | 39385..39871 | + | 487 | Protein_50 | DUF1380 family protein | - |
| QJB08_RS24045 (39922) | 39922..40692 | + | 771 | WP_001044393.1 | hypothetical protein | - |
| QJB08_RS24050 (41110) | 41110..41535 | + | 426 | WP_001198886.1 | antirestriction protein | - |
| QJB08_RS24055 (41582) | 41582..42004 | + | 423 | WP_000271729.1 | DUF1380 family protein | - |
| QJB08_RS24060 (42001) | 42001..42192 | + | 192 | WP_001027500.1 | hypothetical protein | - |
| QJB08_RS24065 (42263) | 42263..42610 | + | 348 | WP_001398159.1 | hypothetical protein | - |
| QJB08_RS24070 (42962) | 42962..43489 | + | 528 | WP_001276110.1 | single-stranded DNA-binding protein | - |
| QJB08_RS24075 (43547) | 43547..43780 | + | 234 | WP_000006014.1 | DUF905 domain-containing protein | - |
| QJB08_RS24080 (43839) | 43839..45797 | + | 1959 | WP_021265661.1 | ParB/RepB/Spo0J family partition protein | - |
| QJB08_RS24085 (45852) | 45852..46286 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| QJB08_RS24090 (46283) | 46283..47002 | + | 720 | WP_001276261.1 | plasmid SOS inhibition protein A | - |
| QJB08_RS24095 (46999) | 46999..47595 | + | 597 | WP_000978012.1 | hypothetical protein | - |
| QJB08_RS24100 (48058) | 48058..48558 | + | 501 | WP_000117609.1 | antirestriction protein ArdA | - |
| QJB08_RS24105 (49287) | 49287..49721 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| QJB08_RS24110 (49813) | 49813..50079 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| QJB08_RS24115 (50144) | 50144..51085 | + | 942 | WP_000038339.1 | Recombination-promoting nuclease RpnA | VF |
| QJB08_RS24120 (51147) | 51147..51317 | + | 171 | WP_000150325.1 | hypothetical protein | - |
| QJB08_RS24125 (51348) | 51348..51599 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| QJB08_RS24130 (52179) | 52179..53027 | + | 849 | WP_025653527.1 | DUF4942 domain-containing protein | - |
| QJB08_RS24135 (53112) | 53112..53447 | - | 336 | WP_000157098.1 | hypothetical protein | - |
| QJB08_RS24140 (53681) | 53681..54013 | + | 333 | WP_001283947.1 | IncI1-type relaxosome accessory protein NikA | - |
| QJB08_RS24145 (54024) | 54024..56720 | + | 2697 | WP_283187872.1 | Protein TraI | Relaxase |
| QJB08_RS24150 (56757) | 56757..59048 | - | 2292 | WP_001289269.1 | F-type conjugative transfer protein TrbC | - |
| QJB08_RS24155 (59041) | 59041..60111 | - | 1071 | WP_000151576.1 | IncI1-type conjugal transfer protein TrbB | - |
| QJB08_RS24160 (60130) | 60130..61338 | - | 1209 | WP_000121273.1 | IncI1-type conjugal transfer protein TrbA | - |
| QJB08_RS24165 (61630) | 61630..61782 | + | 153 | WP_001303307.1 | Hok/Gef family protein | - |
| QJB08_RS24170 (61854) | 61854..62105 | - | 252 | WP_001291965.1 | hypothetical protein | - |
| - (62492) | 62492..62543 | - | 52 | NuclAT_0 | - | - |
| - (62492) | 62492..62543 | - | 52 | NuclAT_0 | - | - |
| - (62492) | 62492..62543 | - | 52 | NuclAT_0 | - | - |
| - (62492) | 62492..62543 | - | 52 | NuclAT_0 | - | - |
| - (62492) | 62492..62543 | - | 52 | NuclAT_0 | - | - |
| QJB08_RS24175 (63029) | 63029..63205 | - | 177 | WP_001054900.1 | hypothetical protein | - |
| QJB08_RS24180 (63597) | 63597..63806 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| QJB08_RS24185 (63878) | 63878..64540 | - | 663 | WP_000644794.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| QJB08_RS24190 (64611) | 64611..66779 | - | 2169 | WP_000698368.1 | DotA/TraY family protein | - |
| QJB08_RS24195 (66876) | 66876..67460 | - | 585 | WP_001037985.1 | IncI1-type conjugal transfer protein TraX | - |
| QJB08_RS24200 (67489) | 67489..68691 | - | 1203 | WP_021555368.1 | IncI1-type conjugal transfer protein TraW | - |
| QJB08_RS24205 (68658) | 68658..69272 | - | 615 | WP_001542516.1 | IncI1-type conjugal transfer protein TraV | - |
| QJB08_RS24210 (69272) | 69272..72316 | - | 3045 | WP_283187871.1 | IncI1-type conjugal transfer protein TraU | - |
| QJB08_RS24215 (72406) | 72406..73206 | - | 801 | WP_001164788.1 | IncI1-type conjugal transfer protein TraT | - |
| QJB08_RS24220 (73190) | 73190..73378 | - | 189 | WP_001277255.1 | putative conjugal transfer protein TraS | - |
| QJB08_RS24225 (73442) | 73442..73846 | - | 405 | WP_000086960.1 | IncI1-type conjugal transfer protein TraR | - |
| QJB08_RS24230 (73897) | 73897..74424 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| QJB08_RS24235 (74424) | 74424..75128 | - | 705 | WP_040027719.1 | IncI1-type conjugal transfer protein TraP | - |
| QJB08_RS24240 (75128) | 75128..76417 | - | 1290 | WP_001271994.1 | conjugal transfer protein TraO | - |
| QJB08_RS24245 (76420) | 76420..77403 | - | 984 | WP_021513963.1 | hypothetical protein | VF |
| QJB08_RS24250 (77414) | 77414..78106 | - | 693 | WP_000138552.1 | DotI/IcmL family type IV secretion protein | - |
| QJB08_RS24255 (78103) | 78103..78450 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| QJB08_RS24260 (78468) | 78468..82235 | - | 3768 | WP_061348655.1 | DUF5710 domain-containing protein | - |
| QJB08_RS24265 (82325) | 82325..82876 | - | 552 | WP_000014584.1 | Phospholipase D | VF |
| QJB08_RS24270 (82891) | 82891..83181 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| QJB08_RS24275 (83178) | 83178..84326 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| QJB08_RS24280 (84323) | 84323..85141 | - | 819 | WP_000646097.1 | hypothetical protein | VF |
| QJB08_RS24285 (85138) | 85138..85596 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| QJB08_RS24290 (85991) | 85991..86575 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| QJB08_RS24295 (86635) | 86635..87837 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| QJB08_RS24300 (87923) | 87923..88528 | - | 606 | Protein_102 | conjugal transfer protein TraE | - |
| QJB08_RS24305 (88735) | 88735..89997 | - | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| QJB08_RS24310 (90184) | 90184..90408 | - | 225 | Protein_104 | conjugal transfer protein TraE | - |
| QJB08_RS24315 (90559) | 90559..91713 | - | 1155 | WP_001139958.1 | site-specific integrase | - |
| QJB08_RS24320 (93150) | 93150..94442 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| QJB08_RS24325 (94442) | 94442..95098 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| QJB08_RS24330 (95083) | 95083..95643 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| QJB08_RS24335 (95653) | 95653..96267 | - | 615 | WP_000959785.1 | hypothetical protein | VF |
| QJB08_RS24340 (96285) | 96285..97382 | - | 1098 | WP_001208805.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| QJB08_RS24345 (97395) | 97395..98948 | - | 1554 | WP_000362202.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| QJB08_RS24350 (98959) | 98959..99411 | - | 453 | WP_001247334.1 | hypothetical protein | VF |
| QJB08_RS24355 (99398) | 99398..100693 | - | 1296 | WP_000752772.1 | hypothetical protein | VF |
| QJB08_RS24360 (100686) | 100686..102368 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| QJB08_RS24365 (102382) | 102382..102819 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| QJB08_RS24370 (102819) | 102819..103886 | - | 1068 | WP_001302629.1 | hypothetical protein | VF |
| QJB08_RS24375 (104510) | 104510..104806 | - | 297 | WP_000494779.1 | hypothetical protein | - |
| QJB08_RS24380 (104982) | 104982..105236 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| QJB08_RS24385 (105398) | 105398..105949 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| QJB08_RS24390 (106122) | 106122..106805 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| QJB08_RS24395 (107059) | 107059..107592 | - | 534 | WP_001372168.1 | transcription termination/antitermination NusG family protein | - |
| QJB08_RS24400 (108034) | 108034..108321 | - | 288 | WP_000074849.1 | conjugal transfer protein TraA | - |
| QJB08_RS24405 (108239) | 108239..108469 | - | 231 | WP_228772074.1 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|