MGE detailed information
MGE type: Prophage MGE length: 51133 bp
Accession: NZ_CP124442 Location: 514559..565691 Organism: Escherichia coli strain AVS0196 Replicon: chromosome
Accession: NZ_CP124442 Location: 514559..565691 Organism: Escherichia coli strain AVS0196 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP94_RS02560 () | 509973..510470 | - | 498 | WP_001029106.1 | L-methionine (R)-S-oxide reductase | - |
| QJP94_RS02565 () | 510600..511883 | + | 1284 | WP_001531756.1 | membrane integrity lipid transport subunit YebS | - |
| QJP94_RS02570 () | 511852..514485 | + | 2634 | WP_001298452.1 | lipid-binding membrane homeostasis protein YebT | - |
| QJP94_RS02575 () | 514565..516004 | + | 1440 | WP_001296139.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| QJP94_RS02580 () | 516121..516357 | + | 237 | WP_001295499.1 | YebV family protein | - |
| QJP94_RS02585 () | 516462..516653 | + | 192 | WP_001296140.1 | YebW family protein | - |
| QJP94_RS02590 () | 516654..517310 | - | 657 | WP_000812745.1 | protein-serine/threonine phosphatase | - |
| QJP94_RS02595 () | 517775..518329 | - | 555 | WP_000904983.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| QJP94_RS02600 () | 518359..518862 | + | 504 | WP_021527583.1 | phage tail protein | - |
| QJP94_RS02605 () | 518862..519464 | + | 603 | WP_021527584.1 | tail fiber assembly protein | - |
| QJP94_RS02610 () | 519436..519879 | - | 444 | WP_000978829.1 | tail fiber assembly protein | - |
| QJP94_RS02615 () | 519879..520550 | - | 672 | WP_021527585.1 | hypothetical protein | - |
| QJP94_RS02620 () | 520550..521230 | - | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| QJP94_RS02625 () | 521227..522426 | - | 1200 | WP_021527586.1 | baseplate J/gp47 family protein | - |
| QJP94_RS02630 () | 522426..522779 | - | 354 | WP_001270632.1 | hypothetical protein | - |
| QJP94_RS02635 () | 522779..523531 | - | 753 | WP_021527587.1 | Gp138 family membrane-puncturing spike protein | - |
| QJP94_RS02640 () | 524306..524659 | - | 354 | WP_021527589.1 | hypothetical protein | - |
| QJP94_RS02645 () | 524659..525726 | - | 1068 | WP_021527590.1 | hypothetical protein | - |
| QJP94_RS02650 () | 525729..526031 | - | 303 | WP_000155119.1 | hypothetical protein | - |
| QJP94_RS02655 () | 526031..526618 | - | 588 | WP_021527591.1 | hypothetical protein | - |
| QJP94_RS02660 () | 526618..528606 | - | 1989 | WP_021527592.1 | hypothetical protein | - |
| QJP94_RS02665 () | 528596..528772 | - | 177 | WP_023141050.1 | hypothetical protein | - |
| QJP94_RS02670 () | 528784..529236 | - | 453 | WP_021527593.1 | hypothetical protein | - |
| QJP94_RS02675 () | 529240..529680 | - | 441 | WP_000109249.1 | DUF3277 family protein | - |
| QJP94_RS02680 () | 529691..530836 | - | 1146 | WP_021527594.1 | DUF3383 family protein | - |
| QJP94_RS02685 () | 530840..531403 | - | 564 | WP_021527595.1 | hypothetical protein | - |
| QJP94_RS02690 () | 531378..531767 | - | 390 | WP_021527596.1 | hypothetical protein | - |
| QJP94_RS02695 () | 531754..532308 | - | 555 | WP_021527597.1 | hypothetical protein | - |
| QJP94_RS02700 () | 532305..532712 | - | 408 | WP_000042171.1 | DUF4054 domain-containing protein | - |
| QJP94_RS02705 () | 532678..533046 | - | 369 | WP_021527598.1 | hypothetical protein | - |
| QJP94_RS02710 () | 533087..534028 | - | 942 | WP_000627487.1 | DUF2184 domain-containing protein | - |
| QJP94_RS02715 () | 534040..534546 | - | 507 | WP_001066732.1 | hypothetical protein | - |
| QJP94_RS02720 () | 534550..535770 | - | 1221 | WP_021527599.1 | DUF2213 domain-containing protein | - |
| QJP94_RS02725 () | 535785..536519 | - | 735 | WP_149011642.1 | phage minor head protein | - |
| QJP94_RS02730 () | 536410..537876 | - | 1467 | WP_001551494.1 | DUF1073 domain-containing protein | - |
| QJP94_RS02735 () | 537876..539498 | - | 1623 | WP_021527601.1 | hypothetical protein | - |
| QJP94_RS02740 () | 539501..540052 | - | 552 | WP_001218996.1 | terminase small subunit | - |
| QJP94_RS02745 () | 540072..540620 | + | 549 | WP_000762846.1 | hypothetical protein | - |
| QJP94_RS02750 () | 540753..540938 | - | 186 | WP_000113285.1 | hypothetical protein | - |
| QJP94_RS02755 () | 540919..541197 | - | 279 | WP_173671027.1 | hypothetical protein | - |
| QJP94_RS02760 () | 541082..541474 | - | 393 | WP_001311799.1 | DUF2570 domain-containing protein | - |
| QJP94_RS02765 () | 541458..541934 | - | 477 | WP_001194115.1 | glycoside hydrolase family protein | - |
| QJP94_RS02770 () | 541938..542279 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| QJP94_RS02775 () | 542496..542657 | + | 162 | WP_001419877.1 | hypothetical protein | - |
| QJP94_RS02780 () | 542626..543195 | - | 570 | WP_021527603.1 | hypothetical protein | - |
| QJP94_RS02785 () | 543417..543959 | - | 543 | WP_001533369.1 | DUF1133 family protein | - |
| QJP94_RS02790 () | 543956..544246 | - | 291 | WP_016236029.1 | DUF1364 domain-containing protein | - |
| QJP94_RS02795 () | 544246..544845 | - | 600 | WP_021527604.1 | DUF1367 family protein | - |
| QJP94_RS02800 () | 545405..545560 | - | 156 | WP_000813269.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP94_RS02805 () | 546375..546467 | - | 93 | Protein_557 | DUF551 domain-containing protein | - |
| QJP94_RS02810 () | 546714..546839 | - | 126 | Protein_558 | hypothetical protein | - |
| QJP94_RS02815 () | 546850..547113 | - | 264 | WP_021527607.1 | hypothetical protein | - |
| QJP94_RS02820 () | 547115..547606 | - | 492 | WP_021527608.1 | hypothetical protein | - |
| QJP94_RS02825 () | 547609..548085 | - | 477 | WP_021527609.1 | hypothetical protein | - |
| QJP94_RS02830 () | 548181..548537 | - | 357 | WP_021527610.1 | hypothetical protein | - |
| QJP94_RS02835 () | 548595..549017 | - | 423 | WP_021527611.1 | DUF977 family protein | - |
| QJP94_RS02840 () | 549033..549794 | - | 762 | WP_021527612.1 | DUF1627 domain-containing protein | - |
| QJP94_RS02845 () | 549817..550563 | - | 747 | WP_000788992.1 | ATP-binding protein | - |
| QJP94_RS02850 () | 550570..551358 | - | 789 | WP_016236034.1 | hypothetical protein | - |
| QJP94_RS02855 () | 551436..551858 | - | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| QJP94_RS02860 () | 551855..552097 | - | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| QJP94_RS02865 () | 552194..552613 | + | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| QJP94_RS02870 () | 552913..553131 | + | 219 | WP_000232638.1 | hypothetical protein | - |
| QJP94_RS02875 () | 553097..553291 | - | 195 | WP_001419881.1 | hypothetical protein | - |
| QJP94_RS02880 () | 553688..553909 | + | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| QJP94_RS02885 () | 553909..554079 | + | 171 | WP_001359121.1 | YdaE family protein | - |
| QJP94_RS02890 () | 554154..554429 | + | 276 | WP_001452559.1 | hypothetical protein | - |
| QJP94_RS02895 () | 554528..557161 | + | 2634 | WP_021527613.1 | exodeoxyribonuclease VIII | - |
| QJP94_RS02900 () | 557154..557963 | + | 810 | WP_000166317.1 | recombination protein RecT | - |
| QJP94_RS02905 () | 558020..558214 | + | 195 | WP_042853000.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | - |
| QJP94_RS02910 () | 558207..558395 | + | 189 | WP_001356607.1 | DUF1187 family protein | - |
| - () | 558213..558391 | - | 179 | NuclAT_0 | - | - |
| - () | 558213..558391 | - | 179 | NuclAT_0 | - | - |
| - () | 558213..558391 | - | 179 | NuclAT_0 | - | - |
| - () | 558213..558391 | - | 179 | NuclAT_0 | - | - |
| QJP94_RS02915 () | 558502..558783 | + | 282 | WP_001311878.1 | excisionase | - |
| QJP94_RS02920 () | 558749..559825 | + | 1077 | WP_001189091.1 | hypothetical protein ; Integrase | Integrase |
| - | 559956..560187 | + | 232 | - | - | Antitoxin Detail |
| - | 559957..560059 | - | 103 | - | - | Toxin Detail |
| QJP94_RS02925 () | 560217..560558 | - | 342 | WP_000976472.1 | YebY family protein | - |
| QJP94_RS02930 () | 560571..561443 | - | 873 | WP_000879317.1 | copper homeostasis membrane protein CopD | - |
| QJP94_RS02935 () | 561447..561821 | - | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| QJP94_RS02940 () | 561960..562190 | + | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| QJP94_RS02945 () | 562292..562948 | + | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein YobB | - |
| QJP94_RS02950 () | 562972..563634 | + | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| QJP94_RS02955 () | 563631..565691 | - | 2061 | WP_000936925.1 | oligopeptidase B | - |
| QJP94_RS02960 () | 565900..566559 | - | 660 | WP_000024724.1 | tellurite resistance TerB family protein | - |
| QJP94_RS02965 () | 566886..567242 | - | 357 | WP_001295500.1 | protein YebF | - |
| QJP94_RS02970 () | 567309..567599 | - | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| QJP94_RS02975 () | 567733..568911 | + | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| QJP94_RS02980 () | 568967..569608 | - | 642 | WP_000800503.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|