MGE detailed information
MGE type: Genomic_island MGE length: 25386 bp
Accession: NZ_CP124424 Location: 3883845..3909230 Organism: Escherichia coli strain AVS0247 Replicon: chromosome
Accession: NZ_CP124424 Location: 3883845..3909230 Organism: Escherichia coli strain AVS0247 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB03_RS18720 (3880110) | 3880110..3881213 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJB03_RS18725 (3881225) | 3881225..3882478 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJB03_RS18735 (3882683) | 3882683..3882886 | - | 204 | Protein_3658 | integrase | - |
| QJB03_RS18740 (3883032) | 3883032..3883502 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJB03_RS18745 (3883480) | 3883480..3883638 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJB03_RS18750 (3883845) | 3883845..3885092 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJB03_RS18755 (3885082) | 3885082..3886719 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJB03_RS18760 (3886713) | 3886713..3889811 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJB03_RS18765 (3890095) | 3890095..3890877 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJB03_RS18770 (3890864) | 3890864..3891784 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJB03_RS18775 (3891949) | 3891949..3892725 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| QJB03_RS18780 (3892933) | 3892933..3893268 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJB03_RS18785 (3893495) | 3893495..3893653 | - | 159 | Protein_3668 | integrase | - |
| QJB03_RS18790 (3893702) | 3893702..3893887 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJB03_RS18795 (3894102) | 3894102..3894716 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJB03_RS18800 (3894787) | 3894787..3894953 | + | 167 | Protein_3671 | tail fiber assembly protein | - |
| QJB03_RS18805 (3894965) | 3894965..3895294 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJB03_RS18810 (3895601) | 3895601..3896311 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJB03_RS18815 (3896280) | 3896280..3897923 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| QJB03_RS18820 (3897913) | 3897913..3900438 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJB03_RS18825 (3900464) | 3900464..3901132 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJB03_RS18830 (3901189) | 3901189..3901776 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJB03_RS18835 (3901851) | 3901851..3902393 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJB03_RS18840 (3903217) | 3903217..3903442 | + | 226 | Protein_3679 | protein YkgL | - |
| QJB03_RS18845 (3903477) | 3903477..3903617 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJB03_RS18850 (3903617) | 3903617..3903880 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJB03_RS18855 (3904216) | 3904216..3904299 | - | 84 | Protein_3682 | hypothetical protein | - |
| QJB03_RS18860 (3904819) | 3904819..3905961 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| QJB03_RS18865 (3906134) | 3906134..3907054 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJB03_RS18870 (3907211) | 3907211..3908137 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJB03_RS18875 (3908337) | 3908337..3909230 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJB03_RS18880 (3909261) | 3909261..3910250 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJB03_RS18885 (3910277) | 3910277..3911128 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|