MGE detailed information
MGE type: Genomic_island MGE length: 47885 bp
Accession: NZ_CP124415 Location: 3858332..3906216 Organism: Escherichia coli strain AVS0223 Replicon: chromosome
Accession: NZ_CP124415 Location: 3858332..3906216 Organism: Escherichia coli strain AVS0223 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP60_RS18525 (3854597) | 3854597..3855700 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJP60_RS18530 (3855712) | 3855712..3856965 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJP60_RS18540 (3857170) | 3857170..3857373 | - | 204 | Protein_3622 | integrase | - |
| QJP60_RS18545 (3857519) | 3857519..3857989 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJP60_RS18550 (3857967) | 3857967..3858125 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJP60_RS18555 (3858332) | 3858332..3859579 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJP60_RS18560 (3859569) | 3859569..3861206 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJP60_RS18565 (3861200) | 3861200..3864298 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJP60_RS18570 (3864582) | 3864582..3865364 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJP60_RS18575 (3865351) | 3865351..3866271 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJP60_RS18580 (3866436) | 3866436..3867212 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| QJP60_RS18585 (3867420) | 3867420..3867755 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJP60_RS18590 (3867982) | 3867982..3868140 | - | 159 | Protein_3632 | integrase | - |
| QJP60_RS18595 (3868189) | 3868189..3868374 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJP60_RS18600 (3868589) | 3868589..3869203 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJP60_RS18605 (3869274) | 3869274..3869440 | + | 167 | Protein_3635 | tail fiber assembly protein | - |
| QJP60_RS18610 (3869452) | 3869452..3869781 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJP60_RS18615 (3870088) | 3870088..3870798 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJP60_RS18620 (3870767) | 3870767..3872410 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| QJP60_RS18625 (3872400) | 3872400..3874925 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJP60_RS18630 (3874951) | 3874951..3875619 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJP60_RS18635 (3875676) | 3875676..3876263 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJP60_RS18640 (3876338) | 3876338..3876880 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJP60_RS18645 (3877704) | 3877704..3877929 | + | 226 | Protein_3643 | protein YkgL | - |
| QJP60_RS18650 (3877964) | 3877964..3878104 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJP60_RS18655 (3878104) | 3878104..3878367 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJP60_RS18660 (3878703) | 3878703..3878786 | - | 84 | Protein_3646 | hypothetical protein | - |
| QJP60_RS18665 (3879306) | 3879306..3880448 | - | 1143 | WP_000182343.1 | NADH-dependent flavin oxidoreductase | - |
| QJP60_RS18670 (3880621) | 3880621..3881541 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJP60_RS18675 (3881698) | 3881698..3882624 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP60_RS18680 (3882824) | 3882824..3883717 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJP60_RS18685 (3883748) | 3883748..3884737 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJP60_RS18690 (3884764) | 3884764..3885615 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QJP60_RS18695 (3886181) | 3886181..3890428 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| QJP60_RS18700 (3890553) | 3890553..3891410 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| QJP60_RS18705 (3891658) | 3891658..3892527 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| QJP60_RS18710 (3892687) | 3892687..3893280 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| QJP60_RS18715 (3893292) | 3893292..3893528 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QJP60_RS18720 (3893637) | 3893637..3894962 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QJP60_RS18725 (3895189) | 3895189..3896043 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QJP60_RS18730 (3896569) | 3896569..3897288 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| QJP60_RS18735 (3897299) | 3897299..3898726 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QJP60_RS18740 (3898719) | 3898719..3899414 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| QJP60_RS18745 (3899657) | 3899657..3900325 | - | 669 | WP_001005267.1 | protein YkgH | - |
| QJP60_RS18750 (3900509) | 3900509..3902800 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| QJP60_RS18755 (3902842) | 3902842..3903603 | - | 762 | WP_001213045.1 | protein HyxA | - |
| QJP60_RS18760 (3903757) | 3903757..3904551 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| QJP60_RS18765 (3904610) | 3904610..3905173 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| QJP60_RS18770 (3906258) | 3906258..3907928 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| QJP60_RS18775 (3907942) | 3907942..3909414 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| QJP60_RS18780 (3909428) | 3909428..3910015 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|