MGE detailed information
MGE type: Genomic_island MGE length: 24941 bp
Accession: NZ_CP124410 Location: 3212430..3237370 Organism: Escherichia coli strain AVS0543 Replicon: chromosome
Accession: NZ_CP124410 Location: 3212430..3237370 Organism: Escherichia coli strain AVS0543 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP61_RS15425 (3209278) | 3209278..3209997 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP61_RS15430 (3209994) | 3209994..3211625 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP61_RS15435 (3211806) | 3211806..3212036 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP61_RS15440 (3212048) | 3212048..3212320 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP61_RS15445 (3212430) | 3212430..3214967 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJP61_RS15450 (3215000) | 3215000..3215692 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJP61_RS15455 (3215757) | 3215757..3216281 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP61_RS15460 (3216682) | 3216682..3220494 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJP61_RS15465 (3221392) | 3221392..3222222 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP61_RS15470 (3223377) | 3223377..3227306 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJP61_RS15475 (3227520) | 3227520..3227792 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP61_RS15480 (3228020) | 3228020..3228316 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP61_RS15485 (3228344) | 3228344..3228517 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP61_RS15490 (3228636) | 3228636..3230153 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP61_RS15495 (3230390) | 3230390..3231847 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP61_RS15500 (3231906) | 3231906..3234053 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJP61_RS15505 (3234133) | 3234133..3235467 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP61_RS15510 (3235833) | 3235833..3237370 | - | 1538 | Protein_3031 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP61_RS15515 (3237630) | 3237630..3237789 | - | 160 | Protein_3032 | integrase | - |
| QJP61_RS15525 (3238169) | 3238169..3238744 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP61_RS15530 (3238781) | 3238781..3240478 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP61_RS15535 (3240454) | 3240454..3240792 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP61_RS15540 (3240908) | 3240908..3242209 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|