MGE detailed information
MGE type: IScluster/Tn MGE length: 12308 bp
Accession: NZ_CP124401 Location: 40384..52691 Organism: Escherichia coli strain AVS0528 Replicon: plasmid pAVS0528-A
Accession: NZ_CP124401 Location: 40384..52691 Organism: Escherichia coli strain AVS0528 Replicon: plasmid pAVS0528-A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP80_RS24415 (35473) | 35473..36000 | - | 528 | WP_000178050.1 | iron transporter | - |
| QJP80_RS24420 (36041) | 36041..37927 | - | 1887 | WP_000118029.1 | FTR1 family protein | - |
| QJP80_RS24425 (38274) | 38274..39035 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| QJP80_RS24430 (39272) | 39272..39778 | - | 507 | WP_000949452.1 | protein disulfide oxidoreductase | - |
| QJP80_RS24435 (39768) | 39768..39938 | - | 171 | Protein_42 | DsbA family protein | - |
| QJP80_RS24440 (40076) | 40076..40188 | - | 113 | Protein_43 | IS6 family transposase | - |
| QJP80_RS24445 (40384) | 40384..41081 | + | 698 | WP_103215986.1 | IS1 family transposase IS1R | Transposase |
| QJP80_RS24450 (41096) | 41096..41306 | + | 211 | Protein_45 | IS4 family transposase | - |
| QJP80_RS24455 (41356) | 41356..42056 | - | 701 | Protein_46 | IS6 family transposase IS15DI | Transposase |
| QJP80_RS24460 (42116) | 42116..42478 | - | 363 | Protein_47 | transposase | - |
| QJP80_RS24465 (42513) | 42513..43388 | - | 876 | WP_032277257.1 | Beta-lactamase CTX-M-97 | ARG |
| QJP80_RS24470 (43701) | 43701..44405 | + | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| QJP80_RS24475 (44471) | 44471..45016 | + | 546 | Protein_50 | Tn3 family transposase TnpA_Tn3 | Transposase |
| QJP80_RS24480 (45052) | 45052..45467 | - | 416 | Protein_51 | IS1 family transposase IS1R | Transposase |
| QJP80_RS24485 (45716) | 45716..46117 | - | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| QJP80_RS24490 (46050) | 46050..46307 | - | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| QJP80_RS24495 (46400) | 46400..47053 | - | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| QJP80_RS24500 (47993) | 47993..48850 | - | 858 | WP_001617855.1 | incFII family plasmid replication initiator RepA | - |
| QJP80_RS24505 (48843) | 48843..48917 | - | 75 | WP_031943482.1 | RepA leader peptide Tap | - |
| QJP80_RS24510 (49154) | 49154..49408 | - | 255 | WP_000083850.1 | replication regulatory protein RepA | - |
| QJP80_RS24515 (49705) | 49705..49839 | - | 135 | WP_023144756.1 | Hok/Gef family protein | Toxin Detail |
| - (49884) | 49884..49944 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (49884) | 49884..49944 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (49884) | 49884..49944 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| - (49884) | 49884..49944 | + | 61 | NuclAT_0 | - | Antitoxin Detail |
| QJP80_RS24520 (49911) | 49911..50197 | - | 287 | Protein_59 | DUF2726 domain-containing protein | - |
| QJP80_RS24525 (50275) | 50275..51888 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP80_RS24530 (51919) | 51919..52269 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP80_RS24535 (52266) | 52266..52691 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP80_RS24540 (53250) | 53250..53462 | - | 213 | WP_013023861.1 | hypothetical protein | - |
| QJP80_RS24545 (53593) | 53593..54153 | - | 561 | WP_000139341.1 | fertility inhibition protein FinO | - |
| QJP80_RS24550 (54208) | 54208..54954 | - | 747 | WP_000205718.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|