MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 34433 bp
Accession: NZ_CP124389 Location: 1..34433 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-B
Accession: NZ_CP124389 Location: 1..34433 Organism: Escherichia coli strain AVS0972 Replicon: plasmid pAVS0972-B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB01_RS25150 (QJB01_25150) | 544..1710 | + | 1167 | WP_000539535.1 | hypothetical protein | Relaxase |
| QJB01_RS25155 (QJB01_25155) | 2043..2549 | + | 507 | WP_000872474.1 | transcription termination/antitermination NusG family protein | - |
| QJB01_RS25160 (QJB01_25160) | 2773..3420 | + | 648 | WP_000953535.1 | Type IV secretion system protein virB1 | VF |
| QJB01_RS25165 (QJB01_25165) | 3398..3694 | + | 297 | WP_000040716.1 | TrbC/VirB2 family protein | - |
| QJB01_RS25170 (QJB01_25170) | 3713..6466 | + | 2754 | WP_001363160.1 | Type IV secretion system protein virB4 | VF |
| QJB01_RS25175 (QJB01_25175) | 6477..7235 | + | 759 | WP_000744201.1 | type IV secretion system protein | - |
| QJB01_RS25180 (QJB01_25180) | 7236..7463 | + | 228 | WP_000835348.1 | EexN family lipoprotein | - |
| QJB01_RS25185 (QJB01_25185) | 7473..8606 | + | 1134 | WP_001576910.1 | type IV secretion system protein | - |
| QJB01_RS25190 (QJB01_25190) | 8733..8861 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| QJB01_RS25195 (QJB01_25195) | 8851..9564 | + | 714 | WP_000394613.1 | type IV secretion system protein | - |
| QJB01_RS25200 (QJB01_25200) | 9569..10498 | + | 930 | WP_000783381.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| QJB01_RS25205 (QJB01_25205) | 10495..11700 | + | 1206 | WP_089602783.1 | Type IV secretion system protein virB10 | VF |
| QJB01_RS25210 (QJB01_25210) | 11702..12733 | + | 1032 | WP_001058476.1 | Type IV secretion system protein VirB11 | VF |
| QJB01_RS25215 (QJB01_25215) | 12736..14571 | + | 1836 | WP_000053829.1 | type IV secretory system conjugative DNA transfer family protein | - |
| QJB01_RS25220 (QJB01_25220) | 14568..14981 | + | 414 | WP_001547184.1 | cag pathogenicity island Cag12 family protein | - |
| QJB01_RS25225 (QJB01_25225) | 14978..15280 | + | 303 | WP_000717623.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| QJB01_RS25230 (QJB01_25230) | 15286..15543 | + | 258 | WP_001547185.1 | hypothetical protein | - |
| QJB01_RS25235 (QJB01_25235) | 15625..16059 | + | 435 | WP_001547186.1 | hypothetical protein | - |
| QJB01_RS25240 (QJB01_25240) | 16056..16589 | + | 534 | WP_001547187.1 | thermonuclease family protein | - |
| QJB01_RS25245 (QJB01_25245) | 16600..16941 | + | 342 | WP_001547188.1 | hypothetical protein | - |
| QJB01_RS25250 (QJB01_25250) | 17062..18324 | + | 1263 | WP_001547189.1 | AAA family ATPase | - |
| QJB01_RS25255 (QJB01_25255) | 18328..20478 | + | 2151 | WP_109537469.1 | type IA DNA topoisomerase | - |
| QJB01_RS25260 (QJB01_25260) | 20475..20681 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| QJB01_RS25265 (QJB01_25265) | 20699..21163 | + | 465 | WP_001293140.1 | H-NS family nucleoid-associated regulatory protein | - |
| QJB01_RS25270 (QJB01_25270) | 21267..21923 | + | 657 | WP_001478769.1 | hypothetical protein | - |
| QJB01_RS25275 (QJB01_25275) | 22479..23303 | + | 825 | WP_197731664.1 | Tyrosine recombinase XerD | VF |
| QJB01_RS25280 (QJB01_25280) | 23408..24067 | + | 660 | WP_000516221.1 | peptidyl-arginine deiminase | - |
| QJB01_RS25285 (QJB01_25285) | 24160..24462 | + | 303 | WP_001096509.1 | hypothetical protein | - |
| QJB01_RS25290 (QJB01_25290) | 24499..24783 | + | 285 | WP_109537467.1 | hypothetical protein | - |
| QJB01_RS25295 (QJB01_25295) | 24945..25226 | + | 282 | WP_001290347.1 | membrane protein | - |
| QJB01_RS25300 (QJB01_25300) | 25406..25630 | + | 225 | WP_000493532.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| QJB01_RS25305 (QJB01_25305) | 25672..25887 | + | 216 | WP_000434158.1 | hypothetical protein | - |
| QJB01_RS25310 (QJB01_25310) | 26269..26622 | - | 354 | WP_000877226.1 | DNA distortion polypeptide 3 | - |
| QJB01_RS25315 (QJB01_25315) | 26749..27195 | - | 447 | WP_109537466.1 | hypothetical protein | - |
| QJB01_RS25320 (QJB01_25320) | 27204..28196 | - | 993 | WP_004239667.1 | replication initiation protein | - |
| QJB01_RS25325 (QJB01_25325) | 29189..29524 | + | 336 | WP_001147119.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| QJB01_RS25330 (QJB01_25330) | 29521..29871 | + | 351 | WP_000127482.1 | addiction module antitoxin | - |
| QJB01_RS25335 (QJB01_25335) | 30505..31020 | + | 516 | WP_001547177.1 | J domain-containing protein | - |
| QJB01_RS25340 (QJB01_25340) | 31125..31667 | + | 543 | WP_001083906.1 | hypothetical protein | - |
| QJB01_RS25345 (QJB01_25345) | 31664..31912 | + | 249 | WP_001230706.1 | hypothetical protein | Toxin Detail |
| QJB01_RS25350 (QJB01_25350) | 31902..32129 | + | 228 | WP_000801440.1 | hypothetical protein | Antitoxin Detail |
| QJB01_RS25355 (QJB01_25355) | 32577..32876 | + | 300 | WP_000650311.1 | hypothetical protein | - |
| QJB01_RS25360 (QJB01_25360) | 32928..33302 | + | 375 | WP_000844303.1 | tail-associated lysozyme | - |
| QJB01_RS25365 (QJB01_25365) | 33317..33610 | + | 294 | WP_021568250.1 | hypothetical protein | - |
| QJB01_RS25370 (QJB01_25370) | 33679..33828 | + | 150 | WP_000003876.1 | hypothetical protein | - |
| QJB01_RS25375 (QJB01_25375) | 33841..34113 | + | 273 | WP_001363158.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|