MGE detailed information
MGE type: Genomic_island MGE length: 48932 bp
Accession: NZ_CP124387 Location: 3927608..3976539 Organism: Escherichia coli strain AVS0972 Replicon: chromosome
Accession: NZ_CP124387 Location: 3927608..3976539 Organism: Escherichia coli strain AVS0972 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB01_RS18915 (3923873) | 3923873..3924976 | + | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| QJB01_RS18920 (3924988) | 3924988..3926241 | + | 1254 | WP_000893315.1 | glutamate-5-semialdehyde dehydrogenase | - |
| QJB01_RS18930 (3926446) | 3926446..3926649 | - | 204 | Protein_3700 | integrase | - |
| QJB01_RS18935 (3926795) | 3926795..3927265 | - | 471 | WP_000201175.1 | hypothetical protein | - |
| QJB01_RS18940 (3927243) | 3927243..3927401 | - | 159 | WP_071550417.1 | ash family protein | - |
| QJB01_RS18945 (3927608) | 3927608..3928855 | - | 1248 | WP_000671528.1 | restriction endonuclease subunit S | - |
| QJB01_RS18950 (3928845) | 3928845..3930482 | - | 1638 | WP_000229741.1 | class I SAM-dependent DNA methyltransferase | - |
| QJB01_RS18955 (3930476) | 3930476..3933574 | - | 3099 | WP_000673070.1 | type I restriction endonuclease | - |
| QJB01_RS18960 (3933858) | 3933858..3934640 | + | 783 | WP_001295795.1 | type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein | Antitoxin Detail |
| QJB01_RS18965 (3934627) | 3934627..3935547 | + | 921 | WP_000365807.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | Toxin Detail |
| QJB01_RS18970 (3935712) | 3935712..3936488 | - | 777 | WP_000171155.1 | hypothetical protein ; Integrase | Integrase |
| QJB01_RS18975 (3936696) | 3936696..3937031 | - | 336 | WP_000996167.1 | Arm DNA-binding domain-containing protein | - |
| QJB01_RS18980 (3937258) | 3937258..3937416 | - | 159 | Protein_3710 | integrase | - |
| QJB01_RS18985 (3937465) | 3937465..3937650 | + | 186 | WP_000146240.1 | hypothetical protein | - |
| QJB01_RS18990 (3937865) | 3937865..3938479 | + | 615 | WP_001019923.1 | YagU family protein | - |
| QJB01_RS18995 (3938550) | 3938550..3938716 | + | 167 | Protein_3713 | tail fiber assembly protein | - |
| QJB01_RS19000 (3938728) | 3938728..3939057 | - | 330 | WP_001295797.1 | YkgJ family cysteine cluster protein | - |
| QJB01_RS19005 (3939364) | 3939364..3940074 | - | 711 | WP_001295798.1 | putative fimbrial chaperone EcpE | VF |
| QJB01_RS19010 (3940043) | 3940043..3941686 | - | 1644 | WP_001265646.1 | Fimbria adhesin EcpD | VF |
| QJB01_RS19015 (3941676) | 3941676..3944201 | - | 2526 | WP_001131109.1 | putative outer membrane usher protein EcpC | VF |
| QJB01_RS19020 (3944227) | 3944227..3944895 | - | 669 | WP_000716404.1 | putative fimbrial chaperone EcpB | VF |
| QJB01_RS19025 (3944952) | 3944952..3945539 | - | 588 | WP_000730982.1 | Common pilus major fimbrillin subunit EcpA | VF |
| QJB01_RS19030 (3945614) | 3945614..3946156 | - | 543 | WP_000389022.1 | HTH-type transcriptional regulator EcpR | VF |
| QJB01_RS19035 (3946980) | 3946980..3947205 | + | 226 | Protein_3721 | protein YkgL | - |
| QJB01_RS19040 (3947240) | 3947240..3947380 | - | 141 | WP_000866436.1 | type B 50S ribosomal protein L36 | - |
| QJB01_RS19045 (3947380) | 3947380..3947643 | - | 264 | WP_000803998.1 | type B 50S ribosomal protein L31 | - |
| QJB01_RS19050 (3947979) | 3947979..3948062 | - | 84 | Protein_3724 | hypothetical protein | - |
| QJB01_RS19055 (3948582) | 3948582..3949208 | - | 627 | Protein_3725 | NADH:flavin oxidoreductase | - |
| QJB01_RS19065 (3949979) | 3949979..3950500 | - | 522 | Protein_3727 | NADH:flavin oxidoreductase | - |
| QJB01_RS19070 (3950673) | 3950673..3951593 | - | 921 | WP_000860035.1 | alpha/beta hydrolase | - |
| QJB01_RS19075 (3951750) | 3951750..3952676 | + | 927 | WP_001524125.1 | HTH-type transcriptional regulator PgrR | VF |
| QJB01_RS19080 (3952876) | 3952876..3953769 | + | 894 | WP_000910713.1 | HTH-type transcriptional regulator PgrR | VF |
| QJB01_RS19085 (3953800) | 3953800..3954789 | - | 990 | WP_001172283.1 | aldo/keto reductase | - |
| QJB01_RS19090 (3954816) | 3954816..3955667 | - | 852 | WP_001174452.1 | aldo/keto reductase | - |
| QJB01_RS19095 (3956233) | 3956233..3960480 | + | 4248 | WP_000092552.1 | hypothetical protein | VF |
| QJB01_RS19100 (3960605) | 3960605..3961462 | - | 858 | WP_000620995.1 | Right origin-binding protein | VF |
| QJB01_RS19105 (3961710) | 3961710..3962579 | + | 870 | WP_001295799.1 | aldo/keto reductase | - |
| QJB01_RS19110 (3962739) | 3962739..3963332 | - | 594 | WP_001295800.1 | reactive chlorine species resistance protein RclC | - |
| QJB01_RS19115 (3963344) | 3963344..3963580 | - | 237 | WP_000474088.1 | reactive chlorine resistance periplasmic protein RclB | - |
| QJB01_RS19120 (3963689) | 3963689..3965014 | - | 1326 | WP_001046304.1 | reactive chlorine resistance oxidoreductase RclA | - |
| QJB01_RS19125 (3965241) | 3965241..3966095 | + | 855 | WP_001295801.1 | reactive chlorine-specific transcriptional regulator RclR | - |
| QJB01_RS19130 (3966621) | 3966621..3967340 | + | 720 | WP_001102123.1 | (Fe-S)-binding protein | - |
| QJB01_RS19135 (3967351) | 3967351..3968778 | + | 1428 | WP_001295802.1 | LutB/LldF family L-lactate oxidation iron-sulfur protein | - |
| QJB01_RS19140 (3968771) | 3968771..3969466 | + | 696 | WP_001295803.1 | lactate utilization protein C | - |
| QJB01_RS19145 (3969709) | 3969709..3970377 | - | 669 | WP_001005267.1 | protein YkgH | - |
| QJB01_RS19150 (3970561) | 3970561..3972852 | - | 2292 | WP_000798065.1 | outer membrane autotransporter HyxB | - |
| QJB01_RS19155 (3972894) | 3972894..3973655 | - | 762 | WP_001213045.1 | protein HyxA | - |
| QJB01_RS19160 (3973809) | 3973809..3974603 | - | 795 | WP_001295804.1 | LuxR family transcriptional regulator HyxR | - |
| QJB01_RS19165 (3974933) | 3974933..3975496 | - | 564 | WP_001295805.1 | ISKra4 family transposase ISCep1 | VF |
| QJB01_RS19170 (3976581) | 3976581..3978251 | - | 1671 | WP_001159129.1 | choline dehydrogenase | - |
| QJB01_RS19175 (3978265) | 3978265..3979737 | - | 1473 | WP_001295806.1 | betaine-aldehyde dehydrogenase | - |
| QJB01_RS19180 (3979751) | 3979751..3980338 | - | 588 | WP_001295807.1 | transcriptional regulator BetI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|