MGE detailed information
MGE type: Genomic_island MGE length: 24942 bp
Accession: NZ_CP124387 Location: 3259896..3284837 Organism: Escherichia coli strain AVS0972 Replicon: chromosome
Accession: NZ_CP124387 Location: 3259896..3284837 Organism: Escherichia coli strain AVS0972 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB01_RS15670 (3256744) | 3256744..3257463 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJB01_RS15675 (3257460) | 3257460..3259091 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJB01_RS15680 (3259272) | 3259272..3259502 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB01_RS15685 (3259514) | 3259514..3259786 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB01_RS15690 (3259896) | 3259896..3262433 | - | 2538 | WP_001296664.1 | Outer membrane usher protein FimD | VF |
| QJB01_RS15695 (3262466) | 3262466..3263158 | - | 693 | WP_000760483.1 | putative fimbrial chaperone YraI | VF |
| QJB01_RS15700 (3263223) | 3263223..3263747 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJB01_RS15705 (3264148) | 3264148..3267960 | + | 3813 | WP_000705882.1 | Temperature-sensitive hemagglutinin tsh autotransporter | VF |
| QJB01_RS15710 (3268858) | 3268858..3269688 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB01_RS15715 (3270844) | 3270844..3274773 | + | 3930 | WP_001080129.1 | Serine protease EspC | VF |
| QJB01_RS15720 (3274987) | 3274987..3275259 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJB01_RS15725 (3275487) | 3275487..3275783 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB01_RS15730 (3275811) | 3275811..3275984 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB01_RS15735 (3276103) | 3276103..3277620 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB01_RS15740 (3277857) | 3277857..3279314 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB01_RS15745 (3279373) | 3279373..3281520 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB01_RS15750 (3281600) | 3281600..3282934 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB01_RS15755 (3283300) | 3283300..3284837 | - | 1538 | Protein_3079 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB01_RS15760 (3285097) | 3285097..3285256 | - | 160 | Protein_3080 | integrase | - |
| QJB01_RS15770 (3285636) | 3285636..3286211 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJB01_RS15775 (3286248) | 3286248..3287945 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJB01_RS15780 (3287921) | 3287921..3288259 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJB01_RS15785 (3288375) | 3288375..3289676 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|