MGE detailed information
MGE type: Genomic_island MGE length: 43537 bp
Accession: NZ_CP124374 Location: 4002567..4046103 Organism: Escherichia coli strain AVS0578 Replicon: chromosome
Accession: NZ_CP124374 Location: 4002567..4046103 Organism: Escherichia coli strain AVS0578 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP97_RS19750 (3998240) | 3998240..3998383 | - | 144 | WP_011076574.1 | hypothetical protein | - |
| QJP97_RS19755 (3998633) | 3998633..4002520 | + | 3888 | WP_001034083.1 | serine protease autotransporter toxin Sat | - |
| QJP97_RS19760 (4002792) | 4002792..4003052 | + | 261 | Protein_3869 | IS3 family transposase ISSfl10 | Transposase |
| QJP97_RS19765 (4003034) | 4003034..4003120 | + | 87 | Protein_3870 | IS3 family transposase ISSfl10 | Transposase |
| QJP97_RS19770 (4003117) | 4003117..4004292 | + | 1176 | WP_103572678.1 | IS30 family transposase IS30D | Transposase |
| QJP97_RS19775 (4004307) | 4004307..4004732 | + | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19780 (4004729) | 4004729..4005079 | + | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19785 (4005110) | 4005110..4006207 | + | 1098 | Protein_3874 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19790 (4006207) | 4006207..4007745 | + | 1539 | WP_000997995.1 | IS66 family transposase ISEc8 | Transposase |
| QJP97_RS19795 (4007784) | 4007784..4007969 | - | 186 | Protein_3876 | putative zinc ribbon protein | - |
| QJP97_RS19800 (4007966) | 4007966..4008349 | - | 384 | WP_000271011.1 | putative zinc ribbon protein | - |
| QJP97_RS19805 (4008516) | 4008516..4009085 | - | 570 | WP_000221523.1 | inovirus Gp2 family protein | - |
| QJP97_RS19810 (4009284) | 4009284..4009481 | + | 198 | WP_001547002.1 | hypothetical protein | - |
| QJP97_RS19815 (4009770) | 4009770..4011383 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19820 (4011414) | 4011414..4011764 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19825 (4011761) | 4011761..4012186 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP97_RS19830 (4012354) | 4012354..4012533 | - | 180 | Protein_3883 | hemolysin expression modulator Hha | - |
| QJP97_RS19835 (4013451) | 4013451..4013657 | + | 207 | WP_001095916.1 | AlpA family transcriptional regulator | - |
| QJP97_RS19840 (4013743) | 4013743..4014315 | + | 573 | WP_001296389.1 | hypothetical protein | - |
| QJP97_RS19845 (4014436) | 4014436..4015926 | - | 1491 | WP_001305029.1 | YfjI family protein | - |
| QJP97_RS19850 (4017258) | 4017258..4018130 | + | 873 | WP_001069668.1 | GTPase family protein | - |
| QJP97_RS19855 (4018464) | 4018464..4021586 | + | 3123 | WP_115765541.1 | autotransporter adhesin Ag43 | - |
| QJP97_RS19860 (4021681) | 4021681..4022808 | + | 1128 | Protein_3889 | hypothetical protein | - |
| QJP97_RS19865 (4022884) | 4022884..4023339 | + | 456 | WP_000581502.1 | IrmA family protein | - |
| QJP97_RS19870 (4023418) | 4023418..4023651 | + | 234 | WP_000902034.1 | DUF905 family protein | - |
| QJP97_RS19875 (4023752) | 4023752..4024570 | + | 819 | WP_001234620.1 | DUF932 domain-containing protein | - |
| QJP97_RS19880 (4024625) | 4024625..4025110 | + | 486 | WP_000849565.1 | antirestriction protein | - |
| QJP97_RS19885 (4025126) | 4025126..4025602 | + | 477 | WP_001186726.1 | RadC family protein | - |
| QJP97_RS19890 (4025665) | 4025665..4025886 | + | 222 | WP_000692329.1 | DUF987 domain-containing protein | - |
| QJP97_RS19895 (4025905) | 4025905..4026549 | + | 645 | WP_000094916.1 | hypothetical protein | - |
| QJP97_RS19900 (4026599) | 4026599..4026967 | + | 369 | WP_001305076.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QJP97_RS19905 (4027056) | 4027056..4027433 | + | 378 | WP_000854690.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP97_RS19910 (4027430) | 4027430..4027918 | + | 489 | WP_000761699.1 | DUF5983 family protein | - |
| QJP97_RS19915 (4027935) | 4027935..4028132 | + | 198 | WP_000839293.1 | DUF957 domain-containing protein | - |
| QJP97_RS19920 (4028217) | 4028217..4029062 | + | 846 | WP_001529401.1 | DUF4942 domain-containing protein | - |
| QJP97_RS19925 (4029131) | 4029131..4029526 | + | 396 | WP_000208384.1 | DUF6088 family protein | - |
| QJP97_RS19930 (4029519) | 4029519..4030452 | + | 934 | Protein_3903 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| QJP97_RS19935 (4030869) | 4030869..4031039 | + | 171 | Protein_3904 | IS110 family transposase ISEc32 | Transposase |
| QJP97_RS19940 (4031850) | 4031850..4032833 | + | 984 | WP_001296394.1 | G/U mismatch-specific DNA glycosylase | VF |
| QJP97_RS19945 (4032905) | 4032905..4034053 | + | 1149 | WP_000905920.1 | hypothetical protein | VF |
| QJP97_RS19950 (4034077) | 4034077..4035753 | + | 1677 | WP_001305965.1 | hypothetical protein | VF |
| QJP97_RS19955 (4035763) | 4035763..4036503 | + | 741 | WP_001554265.1 | hypothetical protein | VF |
| QJP97_RS19960 (4036500) | 4036500..4038527 | + | 2028 | WP_135830793.1 | hypothetical protein | VF |
| QJP97_RS19965 (4038562) | 4038562..4039800 | + | 1239 | WP_135830794.1 | hypothetical protein | VF |
| QJP97_RS19970 (4039849) | 4039849..4040838 | - | 990 | WP_000028051.1 | hypothetical protein | - |
| QJP97_RS19975 (4040957) | 4040957..4044466 | - | 3510 | WP_039720365.1 | hypothetical protein | - |
| QJP97_RS19980 (4044659) | 4044659..4045330 | - | 672 | WP_000590232.1 | hypothetical protein | VF |
| QJP97_RS19985 (4045327) | 4045327..4046103 | - | 777 | WP_000124294.1 | hypothetical protein | VF |
| QJP97_RS19990 (4047254) | 4047254..4047790 | - | 537 | WP_000881989.1 | GspM family type II secretion system protein YghD | - |
| QJP97_RS19995 (4047792) | 4047792..4048970 | - | 1179 | WP_000094983.1 | type II secretion system protein GspL | - |
| QJP97_RS20000 (4048967) | 4048967..4049944 | - | 978 | WP_000633217.1 | type II secretion system minor pseudopilin GspK | - |
| QJP97_RS20005 (4049941) | 4049941..4050546 | - | 606 | WP_001250461.1 | type II secretion system minor pseudopilin GspJ | - |
| QJP97_RS20010 (4050543) | 4050543..4050914 | - | 372 | WP_000820109.1 | type II secretion system minor pseudopilin GspI | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|