MGE detailed information
MGE type: Genomic_island MGE length: 88502 bp
Accession: NZ_CP124367 Location: 3298161..3386662 Organism: Escherichia coli strain AVS0465 Replicon: chromosome
Accession: NZ_CP124367 Location: 3298161..3386662 Organism: Escherichia coli strain AVS0465 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP75_RS15925 (3295009) | 3295009..3295728 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJP75_RS15930 (3295725) | 3295725..3297356 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJP75_RS15935 (3297537) | 3297537..3297767 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJP75_RS15940 (3297779) | 3297779..3298051 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJP75_RS15945 (3298161) | 3298161..3300698 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| QJP75_RS15950 (3300731) | 3300731..3301423 | - | 693 | WP_000760483.1 | hypothetical protein | VF |
| QJP75_RS15955 (3301488) | 3301488..3302012 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJP75_RS15960 (3302413) | 3302413..3306225 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| QJP75_RS15965 (3307123) | 3307123..3307953 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJP75_RS15970 (3309109) | 3309109..3313038 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| QJP75_RS15975 (3313252) | 3313252..3313524 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJP75_RS15980 (3313752) | 3313752..3314048 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJP75_RS15985 (3314076) | 3314076..3314249 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJP75_RS15990 (3314368) | 3314368..3315885 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJP75_RS15995 (3316122) | 3316122..3317579 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJP75_RS16000 (3317638) | 3317638..3319785 | - | 2148 | WP_282504231.1 | lysine decarboxylase CadA | - |
| QJP75_RS16005 (3319865) | 3319865..3321199 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJP75_RS16010 (3321565) | 3321565..3323103 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJP75_RS16015 (3323363) | 3323363..3323522 | - | 160 | Protein_3127 | integrase | - |
| QJP75_RS16020 (3323852) | 3323852..3324421 | - | 570 | WP_001560692.1 | DUF4942 domain-containing protein | - |
| QJP75_RS16025 (3324518) | 3324518..3324715 | - | 198 | WP_000839281.1 | DUF957 domain-containing protein | - |
| QJP75_RS16030 (3324727) | 3324727..3325215 | - | 489 | WP_000777545.1 | DUF5983 family protein | - |
| QJP75_RS16035 (3325212) | 3325212..3325586 | - | 375 | WP_000854753.1 | TA system toxin CbtA family protein | Toxin Detail |
| QJP75_RS16040 (3325676) | 3325676..3326044 | - | 369 | WP_001540478.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| QJP75_RS16045 (3326207) | 3326207..3326428 | - | 222 | WP_000692311.1 | DUF987 domain-containing protein | - |
| QJP75_RS16050 (3326491) | 3326491..3326967 | - | 477 | WP_001313574.1 | RadC family protein | - |
| QJP75_RS16055 (3326983) | 3326983..3327468 | - | 486 | WP_000214398.1 | antirestriction protein | - |
| QJP75_RS16060 (3327559) | 3327559..3328377 | - | 819 | WP_001234682.1 | DUF932 domain-containing protein | - |
| QJP75_RS16065 (3328467) | 3328467..3328700 | - | 234 | WP_001278283.1 | DUF905 family protein | - |
| QJP75_RS16070 (3328706) | 3328706..3329383 | - | 678 | WP_001097301.1 | hypothetical protein | - |
| QJP75_RS16075 (3329531) | 3329531..3330211 | - | 681 | WP_001282919.1 | WYL domain-containing protein | - |
| QJP75_RS16080 (3330414) | 3330414..3331298 | - | 885 | WP_001116801.1 | YfjP family GTPase | - |
| QJP75_RS16085 (3331399) | 3331399..3332622 | + | 1224 | WP_021556275.1 | hypothetical protein | - |
| QJP75_RS16090 (3334075) | 3334075..3334806 | + | 732 | WP_001075472.1 | inovirus Gp2 family protein | - |
| QJP75_RS16095 (3335153) | 3335153..3335728 | + | 576 | WP_000991593.1 | hypothetical protein | - |
| QJP75_RS16100 (3335797) | 3335797..3336030 | + | 234 | WP_000958492.1 | AlpA family transcriptional regulator | - |
| QJP75_RS16105 (3336027) | 3336027..3336152 | + | 126 | WP_000831909.1 | hypothetical protein | - |
| QJP75_RS16110 (3336281) | 3336281..3336343 | + | 63 | Protein_3146 | IS3 family transposase IS2 | Transposase |
| QJP75_RS16115 (3336335) | 3336335..3336595 | - | 261 | Protein_3147 | IS3 family transposase IS2 | Transposase |
| QJP75_RS16120 (3336698) | 3336698..3337843 | + | 1146 | Protein_3148 | Multidrug resistance protein MdtB | VF |
| QJP75_RS16125 (3337943) | 3337943..3338314 | + | 372 | WP_002430738.1 | TetR family transcriptional regulator | - |
| QJP75_RS16130 (3338585) | 3338585..3338794 | + | 210 | WP_001332061.1 | hypothetical protein | VF |
| QJP75_RS16135 (3338745) | 3338745..3338930 | + | 186 | WP_223349228.1 | helix-turn-helix domain-containing protein | - |
| QJP75_RS16140 (3339287) | 3339287..3339832 | - | 546 | WP_000015571.1 | propanediol utilization system shell hexameric protein GrpS | - |
| QJP75_RS16145 (3339877) | 3339877..3341028 | - | 1152 | WP_001001003.1 | propanediol utilization system methionine adenosyltransferase GrpR | - |
| QJP75_RS16150 (3341157) | 3341157..3342212 | - | 1056 | WP_000494233.1 | HTH-type transcriptional activator RhaR | VF |
| QJP75_RS16155 (3342229) | 3342229..3343491 | - | 1263 | WP_001329690.1 | propanediol utilization sensor histidine kinase GrpP | - |
| QJP75_RS16160 (3344041) | 3344041..3344523 | - | 483 | WP_001362989.1 | reverse transcriptase domain-containing protein | - |
| QJP75_RS16165 (3344590) | 3344590..3345129 | - | 540 | WP_001332064.1 | maturase | - |
| QJP75_RS16170 (3345615) | 3345615..3346520 | - | 906 | WP_001086421.1 | propanediol utilization system permease GrpO | - |
| QJP75_RS16175 (3346657) | 3346657..3347574 | - | 918 | WP_001044977.1 | glycyl radical diol dehydratase-activating enzyme GrpN | - |
| QJP75_RS16180 (3347683) | 3347683..3350235 | - | 2553 | WP_000890295.1 | glycyl radical diol dehydratase GrpM | - |
| QJP75_RS16185 (3350284) | 3350284..3350859 | - | 576 | WP_000722279.1 | propanediol utilization system protease GrpL | - |
| QJP75_RS16190 (3350870) | 3350870..3351169 | - | 300 | WP_000746009.1 | propanediol utilization system shell hexameric protein GrpK | - |
| QJP75_RS16195 (3351193) | 3351193..3352710 | - | 1518 | WP_000997839.1 | N-succinylglutamate 5-semialdehyde dehydrogenase | VF |
| QJP75_RS16200 (3352771) | 3352771..3353556 | - | 786 | WP_001205499.1 | propanediol utilization microcompartment protein GrpI | - |
| QJP75_RS16205 (3353578) | 3353578..3353859 | - | 282 | WP_001301171.1 | propanediol utilization system shell hexameric protein GrpH | - |
| QJP75_RS16210 (3354144) | 3354144..3355340 | - | 1197 | WP_001362987.1 | propanediol utilization system propionate kinase GrpG | - |
| QJP75_RS16215 (3355369) | 3355369..3355866 | - | 498 | WP_001332069.1 | propanediol utilization system heme-binding protein GrpF | - |
| QJP75_RS16220 (3355894) | 3355894..3356163 | - | 270 | WP_000280292.1 | propanediol utilization microcompartment vertex protein GrpE | - |
| QJP75_RS16225 (3356175) | 3356175..3356900 | - | 726 | WP_001329683.1 | propanediol utilization system flavoprotein GrpD | - |
| QJP75_RS16230 (3356884) | 3356884..3357642 | - | 759 | WP_001332070.1 | propanediol utilization system chaperone GrpC | - |
| QJP75_RS16235 (3357697) | 3357697..3358383 | - | 687 | WP_001109982.1 | propanediol utilization system phosphotransacylase GrpB | - |
| QJP75_RS16240 (3358523) | 3358523..3359641 | - | 1119 | WP_000135343.1 | hypothetical protein | VF |
| QJP75_RS16245 (3359992) | 3359992..3360491 | + | 500 | Protein_3173 | DNA-binding protein | - |
| QJP75_RS16250 (3360587) | 3360587..3360820 | + | 234 | WP_000124176.1 | hypothetical protein | - |
| QJP75_RS16255 (3360873) | 3360873..3361064 | - | 192 | WP_001287878.1 | DUF4222 domain-containing protein | - |
| QJP75_RS16260 (3361744) | 3361744..3362088 | + | 345 | Protein_3176 | POTRA domain-containing protein | - |
| QJP75_RS16265 (3362088) | 3362088..3362564 | + | 477 | Protein_3177 | VasL domain-containing protein | - |
| QJP75_RS16270 (3362803) | 3362803..3363888 | + | 1086 | WP_063625821.1 | hypothetical protein | - |
| QJP75_RS16275 (3364020) | 3364020..3365804 | + | 1785 | WP_000269403.1 | P-loop NTPase fold protein | - |
| QJP75_RS16280 (3365804) | 3365804..3366556 | + | 753 | WP_024946619.1 | hypothetical protein | - |
| QJP75_RS16285 (3366553) | 3366553..3367857 | + | 1305 | WP_032152058.1 | hypothetical protein | - |
| QJP75_RS16290 (3367854) | 3367854..3368579 | + | 726 | WP_000020778.1 | TatD family hydrolase | - |
| QJP75_RS16295 (3369132) | 3369132..3369707 | - | 576 | WP_001774140.1 | SLATT domain-containing protein | - |
| QJP75_RS16300 (3369715) | 3369715..3371043 | - | 1329 | WP_000019624.1 | nucleotidyltransferase | - |
| QJP75_RS16305 (3371178) | 3371178..3371363 | - | 186 | Protein_3185 | IS66 family transposase IS682 | Transposase |
| QJP75_RS16315 (3372610) | 3372610..3372957 | - | 348 | WP_000477079.1 | alcohol dehydrogenase catalytic domain-containing protein | - |
| QJP75_RS16320 (3373575) | 3373575..3374268 | - | 694 | Protein_3188 | IS1 family transposase | - |
| QJP75_RS16325 (3374521) | 3374521..3375990 | + | 1470 | WP_001331566.1 | basic amino acid/polyamine antiporter | - |
| QJP75_RS16330 (3376095) | 3376095..3378464 | + | 2370 | WP_000671169.1 | Orn/Lys/Arg decarboxylase N-terminal domain-containing protein | - |
| QJP75_RS16335 (3378539) | 3378539..3380038 | + | 1500 | WP_001331567.1 | basic amino acid/polyamine antiporter | - |
| QJP75_RS16340 (3380181) | 3380181..3380878 | + | 698 | WP_224053098.1 | IS1 family transposase IS1S | Transposase |
| QJP75_RS16345 (3380895) | 3380895..3381686 | + | 792 | Protein_3193 | IS3 family transposase | - |
| QJP75_RS16350 (3381853) | 3381853..3382404 | + | 552 | WP_001447126.1 | Transcriptional regulator SlyA | VF |
| QJP75_RS16360 (3384098) | 3384098..3385141 | - | 1044 | WP_000147021.1 | hypothetical protein | - |
| QJP75_RS16365 (3385397) | 3385397..3386662 | - | 1266 | WP_001218869.1 | hypothetical protein ; Integrase | Integrase |
| QJP75_RS16375 (3387042) | 3387042..3387617 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| QJP75_RS16380 (3387654) | 3387654..3389351 | - | 1698 | WP_000068941.1 | protein-disulfide reductase DsbD | - |
| QJP75_RS16385 (3389327) | 3389327..3389665 | - | 339 | WP_000883409.1 | divalent cation tolerance protein CutA | - |
| QJP75_RS16390 (3389781) | 3389781..3391082 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|