MGE detailed information
MGE type: Genomic_island MGE length: 27909 bp
Accession: NZ_CP124357 Location: 2940521..2968429 Organism: Escherichia coli strain AVS0467 Replicon: chromosome
Accession: NZ_CP124357 Location: 2940521..2968429 Organism: Escherichia coli strain AVS0467 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP58_RS14305 (2935850) | 2935850..2937442 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP58_RS14310 (2937439) | 2937439..2937645 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP58_RS14315 (2937629) | 2937629..2939557 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP58_RS14320 (2939529) | 2939529..2940038 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP58_RS14325 (2940653) | 2940653..2940790 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP58_RS14330 (2940997) | 2940997..2941323 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP58_RS14335 (2941634) | 2941634..2942101 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP58_RS14340 (2942104) | 2942104..2942235 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP58_RS14345 (2942250) | 2942250..2942432 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP58_RS14350 (2942589) | 2942589..2943122 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP58_RS14355 (2943714) | 2943714..2944049 | - | 336 | Protein_2823 | YdfR family protein | - |
| QJP58_RS14360 (2944054) | 2944054..2944269 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP58_RS14365 (2944419) | 2944419..2944580 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP58_RS14370 (2944580) | 2944580..2944765 | - | 186 | Protein_2826 | DUF1737 domain-containing protein | - |
| QJP58_RS14375 (2945026) | 2945026..2945361 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP58_RS14380 (2945432) | 2945432..2945548 | + | 117 | Protein_2828 | hypothetical protein | - |
| QJP58_RS14385 (2945642) | 2945642..2945773 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP58_RS14400 (2946578) | 2946578..2947627 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP58_RS14405 (2947778) | 2947778..2947975 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP58_RS14410 (2948202) | 2948202..2949023 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP58_RS14415 (2949020) | 2949020..2949400 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP58_RS14420 (2949401) | 2949401..2950456 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP58_RS14425 (2950458) | 2950458..2950736 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP58_RS14430 (2950895) | 2950895..2950969 | - | 75 | Protein_2836 | hypothetical protein | - |
| QJP58_RS14435 (2951127) | 2951127..2952230 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP58_RS14440 (2952211) | 2952211..2952861 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP58_RS14445 (2953027) | 2953027..2953182 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP58_RS14450 (2953474) | 2953474..2953818 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP58_RS14455 (2953815) | 2953815..2953982 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP58_RS14460 (2953993) | 2953993..2954256 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP58_RS14465 (2954258) | 2954258..2954476 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP58_RS14470 (2954478) | 2954478..2954693 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP58_RS14475 (2954694) | 2954694..2955053 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP58_RS14480 (2955050) | 2955050..2955226 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP58_RS14485 (2955219) | 2955219..2955401 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP58_RS14490 (2955530) | 2955530..2955841 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP58_RS14495 (2955834) | 2955834..2956088 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP58_RS14500 (2956085) | 2956085..2956507 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP58_RS14505 (2956548) | 2956548..2957510 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP58_RS14510 (2957533) | 2957533..2957958 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP58_RS14515 (2957955) | 2957955..2958257 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP58_RS14520 (2958356) | 2958356..2958727 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP58_RS14525 (2958748) | 2958748..2958939 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP58_RS14530 (2958941) | 2958941..2959219 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP58_RS14535 (2959511) | 2959511..2959663 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP58_RS14540 (2959675) | 2959675..2960013 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP58_RS14545 (2960002) | 2960002..2960196 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP58_RS14550 (2960763) | 2960763..2960951 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP58_RS14555 (2960948) | 2960948..2961136 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP58_RS14560 (2961232) | 2961232..2963703 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP58_RS14565 (2963765) | 2963765..2964034 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP58_RS14570 (2964003) | 2964003..2965121 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP58_RS14575 (2965288) | 2965288..2966082 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP58_RS14580 (2966079) | 2966079..2967125 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP58_RS14585 (2967183) | 2967183..2967644 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP58_RS14590 (2967641) | 2967641..2968429 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP58_RS14595 (2968567) | 2968567..2969388 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP58_RS14600 (2969404) | 2969404..2970315 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP58_RS14605 (2970344) | 2970344..2971588 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP58_RS14610 (2971588) | 2971588..2972289 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|