Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2958748..2959219 | Replicon | chromosome |
| Accession | NZ_CP124357 | ||
| Organism | Escherichia coli strain AVS0467 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP58_RS14530 | Protein ID | WP_001303511.1 |
| Coordinates | 2958941..2959219 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP58_RS14525 | Protein ID | WP_001302048.1 |
| Coordinates | 2958748..2958939 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP58_RS14455 (2953815) | 2953815..2953982 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP58_RS14460 (2953993) | 2953993..2954256 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP58_RS14465 (2954258) | 2954258..2954476 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP58_RS14470 (2954478) | 2954478..2954693 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP58_RS14475 (2954694) | 2954694..2955053 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP58_RS14480 (2955050) | 2955050..2955226 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP58_RS14485 (2955219) | 2955219..2955401 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP58_RS14490 (2955530) | 2955530..2955841 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP58_RS14495 (2955834) | 2955834..2956088 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP58_RS14500 (2956085) | 2956085..2956507 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP58_RS14505 (2956548) | 2956548..2957510 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP58_RS14510 (2957533) | 2957533..2957958 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP58_RS14515 (2957955) | 2957955..2958257 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP58_RS14520 (2958356) | 2958356..2958727 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP58_RS14525 (2958748) | 2958748..2958939 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP58_RS14530 (2958941) | 2958941..2959219 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP58_RS14535 (2959511) | 2959511..2959663 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP58_RS14540 (2959675) | 2959675..2960013 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP58_RS14545 (2960002) | 2960002..2960196 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP58_RS14550 (2960763) | 2960763..2960951 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP58_RS14555 (2960948) | 2960948..2961136 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP58_RS14560 (2961232) | 2961232..2963703 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP58_RS14565 (2963765) | 2963765..2964034 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2940521..2968429 | 27908 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|