MGE detailed information
MGE type: Genomic_island MGE length: 24943 bp
Accession: NZ_CP124355 Location: 3354804..3379746 Organism: Escherichia coli strain AVS0171 Replicon: chromosome
Accession: NZ_CP124355 Location: 3354804..3379746 Organism: Escherichia coli strain AVS0171 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB00_RS16475 (3351652) | 3351652..3352371 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| QJB00_RS16480 (3352368) | 3352368..3353999 | - | 1632 | WP_001216462.1 | sensor histidine kinase | - |
| QJB00_RS16485 (3354180) | 3354180..3354410 | + | 231 | WP_000371715.1 | 4Fe-4S mono-cluster protein YjdI | - |
| QJB00_RS16490 (3354422) | 3354422..3354694 | + | 273 | WP_000405645.1 | GNAT family N-acetyltransferase | - |
| QJB00_RS16495 (3354804) | 3354804..3357341 | - | 2538 | WP_001296664.1 | hypothetical protein | VF |
| QJB00_RS16500 (3357374) | 3357374..3358066 | - | 693 | WP_000760483.1 | hypothetical protein | VF |
| QJB00_RS16505 (3358131) | 3358131..3358655 | - | 525 | WP_000491818.1 | hypothetical protein | - |
| QJB00_RS16510 (3359056) | 3359056..3362868 | + | 3813 | WP_000705882.1 | hypothetical protein | VF |
| QJB00_RS16515 (3363766) | 3363766..3364596 | + | 831 | WP_001088099.1 | AraC family transcriptional regulator | - |
| QJB00_RS16520 (3365752) | 3365752..3369681 | + | 3930 | WP_001080129.1 | hypothetical protein | VF |
| QJB00_RS16525 (3369895) | 3369895..3370167 | + | 273 | WP_000405647.1 | GNAT family N-acetyltransferase | - |
| QJB00_RS16530 (3370395) | 3370395..3370691 | + | 297 | WP_001312331.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| QJB00_RS16535 (3370719) | 3370719..3370892 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| QJB00_RS16540 (3371011) | 3371011..3372528 | - | 1518 | WP_000003806.1 | lysine--tRNA ligase | - |
| QJB00_RS16545 (3372765) | 3372765..3374222 | - | 1458 | WP_000856826.1 | dipeptide/tripeptide permease DtpC | - |
| QJB00_RS16550 (3374281) | 3374281..3376428 | - | 2148 | WP_001296667.1 | lysine decarboxylase CadA | - |
| QJB00_RS16555 (3376508) | 3376508..3377842 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| QJB00_RS16560 (3378208) | 3378208..3379746 | - | 1539 | WP_001187191.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| QJB00_RS16565 (3380006) | 3380006..3380165 | - | 160 | Protein_3239 | integrase | - |
| QJB00_RS16570 (3380550) | 3380550..3382085 | - | 1536 | WP_000492897.1 | EAL domain-containing protein | - |
| QJB00_RS16575 (3382156) | 3382156..3382317 | - | 162 | Protein_3241 | DUF4942 domain-containing protein | - |
| QJB00_RS16580 (3382408) | 3382408..3383907 | + | 1500 | WP_029700729.1 | IS21-like element ISEc10 family transposase | - |
| QJB00_RS16585 (3383904) | 3383904..3384659 | + | 756 | WP_000065240.1 | IS21-like element ISEc10 family helper ATPase IstB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|