MGE detailed information
MGE type: Genomic_island MGE length: 27909 bp
Accession: NZ_CP124347 Location: 2944863..2972771 Organism: Escherichia coli strain AVS0283 Replicon: chromosome
Accession: NZ_CP124347 Location: 2944863..2972771 Organism: Escherichia coli strain AVS0283 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP56_RS14380 (2940192) | 2940192..2941784 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP56_RS14385 (2941781) | 2941781..2941987 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP56_RS14390 (2941971) | 2941971..2943899 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP56_RS14395 (2943871) | 2943871..2944380 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP56_RS14400 (2944995) | 2944995..2945132 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP56_RS14405 (2945339) | 2945339..2945665 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP56_RS14410 (2945976) | 2945976..2946443 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP56_RS14415 (2946446) | 2946446..2946577 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP56_RS14420 (2946592) | 2946592..2946774 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP56_RS14425 (2946931) | 2946931..2947464 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP56_RS14430 (2948056) | 2948056..2948391 | - | 336 | Protein_2837 | YdfR family protein | - |
| QJP56_RS14435 (2948396) | 2948396..2948611 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP56_RS14440 (2948761) | 2948761..2948922 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP56_RS14445 (2948922) | 2948922..2949107 | - | 186 | Protein_2840 | DUF1737 domain-containing protein | - |
| QJP56_RS14450 (2949368) | 2949368..2949703 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP56_RS14455 (2949774) | 2949774..2949890 | + | 117 | Protein_2842 | hypothetical protein | - |
| QJP56_RS14460 (2949984) | 2949984..2950115 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP56_RS14475 (2950920) | 2950920..2951969 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP56_RS14480 (2952120) | 2952120..2952317 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP56_RS14485 (2952544) | 2952544..2953365 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP56_RS14490 (2953362) | 2953362..2953742 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP56_RS14495 (2953743) | 2953743..2954798 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP56_RS14500 (2954800) | 2954800..2955078 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP56_RS14505 (2955237) | 2955237..2955311 | - | 75 | Protein_2850 | hypothetical protein | - |
| QJP56_RS14510 (2955469) | 2955469..2956572 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP56_RS14515 (2956553) | 2956553..2957203 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP56_RS14520 (2957369) | 2957369..2957524 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP56_RS14525 (2957816) | 2957816..2958160 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP56_RS14530 (2958157) | 2958157..2958324 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP56_RS14535 (2958335) | 2958335..2958598 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP56_RS14540 (2958600) | 2958600..2958818 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP56_RS14545 (2958820) | 2958820..2959035 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP56_RS14550 (2959036) | 2959036..2959395 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP56_RS14555 (2959392) | 2959392..2959568 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP56_RS14560 (2959561) | 2959561..2959743 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP56_RS14565 (2959872) | 2959872..2960183 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP56_RS14570 (2960176) | 2960176..2960430 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP56_RS14575 (2960427) | 2960427..2960849 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP56_RS14580 (2960890) | 2960890..2961852 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP56_RS14585 (2961875) | 2961875..2962300 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP56_RS14590 (2962297) | 2962297..2962599 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP56_RS14595 (2962698) | 2962698..2963069 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP56_RS14600 (2963090) | 2963090..2963281 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP56_RS14605 (2963283) | 2963283..2963561 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP56_RS14610 (2963853) | 2963853..2964005 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP56_RS14615 (2964017) | 2964017..2964355 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP56_RS14620 (2964344) | 2964344..2964538 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP56_RS14625 (2965105) | 2965105..2965293 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP56_RS14630 (2965290) | 2965290..2965478 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP56_RS14635 (2965574) | 2965574..2968045 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP56_RS14640 (2968107) | 2968107..2968376 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP56_RS14645 (2968345) | 2968345..2969463 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP56_RS14650 (2969630) | 2969630..2970424 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP56_RS14655 (2970421) | 2970421..2971467 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP56_RS14660 (2971525) | 2971525..2971986 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP56_RS14665 (2971983) | 2971983..2972771 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP56_RS14670 (2972909) | 2972909..2973730 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP56_RS14675 (2973746) | 2973746..2974657 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP56_RS14680 (2974686) | 2974686..2975930 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP56_RS14685 (2975930) | 2975930..2976631 | - | 702 | WP_001033695.1 | lipoprotein-releasing ABC transporter ATP-binding protein LolD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|