Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2963090..2963561 | Replicon | chromosome |
| Accession | NZ_CP124347 | ||
| Organism | Escherichia coli strain AVS0283 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP56_RS14605 | Protein ID | WP_001303511.1 |
| Coordinates | 2963283..2963561 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP56_RS14600 | Protein ID | WP_001302048.1 |
| Coordinates | 2963090..2963281 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP56_RS14530 (2958157) | 2958157..2958324 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP56_RS14535 (2958335) | 2958335..2958598 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP56_RS14540 (2958600) | 2958600..2958818 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP56_RS14545 (2958820) | 2958820..2959035 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP56_RS14550 (2959036) | 2959036..2959395 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP56_RS14555 (2959392) | 2959392..2959568 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP56_RS14560 (2959561) | 2959561..2959743 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP56_RS14565 (2959872) | 2959872..2960183 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP56_RS14570 (2960176) | 2960176..2960430 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP56_RS14575 (2960427) | 2960427..2960849 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP56_RS14580 (2960890) | 2960890..2961852 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP56_RS14585 (2961875) | 2961875..2962300 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP56_RS14590 (2962297) | 2962297..2962599 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP56_RS14595 (2962698) | 2962698..2963069 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP56_RS14600 (2963090) | 2963090..2963281 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP56_RS14605 (2963283) | 2963283..2963561 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP56_RS14610 (2963853) | 2963853..2964005 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP56_RS14615 (2964017) | 2964017..2964355 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP56_RS14620 (2964344) | 2964344..2964538 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP56_RS14625 (2965105) | 2965105..2965293 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP56_RS14630 (2965290) | 2965290..2965478 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP56_RS14635 (2965574) | 2965574..2968045 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP56_RS14640 (2968107) | 2968107..2968376 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 2944863..2972771 | 27908 | |
| - | inside | Prophage | sitABCD | - | 2855854..2976631 | 120777 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|