MGE detailed information
MGE type: Prophage MGE length: 120778 bp
Accession: NZ_CP124347 Location: 2855854..2976631 Organism: Escherichia coli strain AVS0283 Replicon: chromosome
Accession: NZ_CP124347 Location: 2855854..2976631 Organism: Escherichia coli strain AVS0283 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP56_RS13830 (2851965) | 2851965..2852213 | - | 249 | WP_001531618.1 | protein YmgC | - |
| QJP56_RS13835 (2852326) | 2852326..2852592 | - | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| QJP56_RS13840 (2852621) | 2852621..2852893 | - | 273 | WP_000858012.1 | hypothetical protein | - |
| QJP56_RS13845 (2852936) | 2852936..2853172 | - | 237 | WP_000554153.1 | regulatory protein YcgZ | - |
| QJP56_RS13850 (2853486) | 2853486..2854697 | + | 1212 | WP_001311624.1 | blue light-responsive regulator BluF | - |
| QJP56_RS13855 (2854902) | 2854902..2855633 | + | 732 | WP_000332288.1 | DNA-binding transcriptional repressor BluR | - |
| QJP56_RS13860 (2855854) | 2855854..2856258 | + | 405 | WP_000373104.1 | DUF1398 domain-containing protein | - |
| QJP56_RS13865 (2856311) | 2856311..2856436 | + | 126 | WP_023146274.1 | hypothetical protein | - |
| QJP56_RS13870 (2856520) | 2856520..2856687 | - | 168 | Protein_2725 | isocitrate/isopropylmalate family dehydrogenase | - |
| QJP56_RS13880 (2858376) | 2858376..2859290 | + | 915 | WP_001256622.1 | hypothetical protein | VF |
| QJP56_RS13885 (2859290) | 2859290..2860117 | + | 828 | WP_000983701.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP56_RS13890 (2860114) | 2860114..2860971 | + | 858 | WP_001101732.1 | hypothetical protein | ARG |
| QJP56_RS13895 (2860968) | 2860968..2861825 | + | 858 | WP_000968127.1 | hypothetical protein | ARG |
| QJP56_RS13900 (2861917) | 2861917..2862210 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| QJP56_RS13905 (2862223) | 2862223..2862501 | - | 279 | WP_000654168.1 | hypothetical protein | - |
| QJP56_RS13910 (2862669) | 2862669..2864282 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP56_RS13915 (2864313) | 2864313..2864663 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP56_RS13920 (2864660) | 2864660..2865085 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP56_RS13925 (2865167) | 2865167..2867095 | - | 1929 | WP_001545960.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP56_RS13930 (2867154) | 2867154..2870552 | - | 3399 | WP_001545959.1 | host specificity protein J | - |
| QJP56_RS13935 (2870613) | 2870613..2871185 | - | 573 | WP_001545958.1 | tail assembly protein | - |
| QJP56_RS13940 (2871182) | 2871182..2871925 | - | 744 | WP_000194748.1 | C40 family peptidase | - |
| QJP56_RS13945 (2871931) | 2871931..2872629 | - | 699 | WP_001152542.1 | phage minor tail protein L | - |
| QJP56_RS13950 (2872629) | 2872629..2872958 | - | 330 | WP_000847387.1 | phage tail protein | - |
| QJP56_RS13955 (2872955) | 2872955..2875516 | - | 2562 | WP_000840282.1 | phage tail tape measure protein | - |
| QJP56_RS13960 (2875509) | 2875509..2875943 | - | 435 | WP_000459449.1 | phage tail assembly protein T | - |
| QJP56_RS13965 (2875925) | 2875925..2876347 | - | 423 | WP_000479204.1 | phage minor tail protein G | - |
| QJP56_RS13970 (2876363) | 2876363..2877103 | - | 741 | WP_001545921.1 | phage tail protein | - |
| QJP56_RS13975 (2877111) | 2877111..2877506 | - | 396 | WP_000683150.1 | phage minor tail U family protein | - |
| QJP56_RS13980 (2877503) | 2877503..2878081 | - | 579 | WP_001007370.1 | phage tail protein | - |
| QJP56_RS13985 (2878093) | 2878093..2878446 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| QJP56_RS13990 (2878439) | 2878439..2878813 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP56_RS13995 (2878865) | 2878865..2879893 | - | 1029 | WP_000522650.1 | major capsid protein | - |
| QJP56_RS14000 (2879951) | 2879951..2880298 | - | 348 | WP_000256813.1 | head decoration protein | - |
| QJP56_RS14005 (2880335) | 2880335..2881840 | - | 1506 | WP_001253893.1 | S49 family peptidase | - |
| QJP56_RS14010 (2881830) | 2881830..2883422 | - | 1593 | Protein_2753 | phage portal protein | - |
| QJP56_RS14015 (2883419) | 2883419..2883625 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| QJP56_RS14020 (2883609) | 2883609..2885537 | - | 1929 | WP_001573719.1 | phage terminase large subunit family protein | - |
| QJP56_RS14025 (2885509) | 2885509..2886057 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| QJP56_RS14030 (2886139) | 2886139..2886417 | - | 279 | WP_012896773.1 | hypothetical protein | - |
| QJP56_RS14035 (2886368) | 2886368..2886550 | + | 183 | WP_001205136.1 | hypothetical protein | - |
| QJP56_RS14040 (2886649) | 2886649..2887023 | - | 375 | WP_000084844.1 | hypothetical protein | - |
| QJP56_RS14045 (2887062) | 2887062..2887505 | - | 444 | WP_001441931.1 | lysis protein | - |
| QJP56_RS14050 (2887502) | 2887502..2887999 | - | 498 | WP_000075094.1 | lysozyme RrrD | - |
| QJP56_RS14055 (2887999) | 2887999..2888214 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QJP56_RS14060 (2888804) | 2888804..2889886 | + | 1083 | WP_000737277.1 | porin OmpC | - |
| QJP56_RS14065 (2890075) | 2890075..2890458 | - | 384 | WP_001204794.1 | antitermination protein QuuD | - |
| QJP56_RS14070 (2890544) | 2890544..2890684 | - | 141 | WP_000971095.1 | YlcG family protein | - |
| QJP56_RS14075 (2890681) | 2890681..2891043 | - | 363 | WP_001099697.1 | crossover junction endodeoxyribonuclease RusA | - |
| QJP56_RS14080 (2891040) | 2891040..2891330 | - | 291 | WP_000774475.1 | DUF1364 domain-containing protein | - |
| QJP56_RS14085 (2891323) | 2891323..2891493 | - | 171 | WP_000224907.1 | NinE family protein | - |
| QJP56_RS14090 (2891493) | 2891493..2891948 | - | 456 | WP_001053004.1 | DNA base-flipping protein YbcN | - |
| QJP56_RS14095 (2891945) | 2891945..2892046 | - | 102 | WP_072093903.1 | hypothetical protein | - |
| QJP56_RS14100 (2892396) | 2892396..2893439 | + | 1044 | WP_000700204.1 | alpha/beta hydrolase | - |
| QJP56_RS14105 (2893789) | 2893789..2895315 | - | 1527 | WP_000709098.1 | hypothetical protein ; Integrase | Integrase |
| QJP56_RS14110 (2895373) | 2895373..2895522 | - | 150 | WP_032143398.1 | hypothetical protein | - |
| QJP56_RS14115 (2895571) | 2895571..2895903 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| QJP56_RS14120 (2895971) | 2895971..2896273 | - | 303 | WP_000145918.1 | protein ren | - |
| QJP56_RS14125 (2896270) | 2896270..2896971 | - | 702 | WP_000788877.1 | replication protein P | - |
| QJP56_RS14130 (2896968) | 2896968..2897987 | - | 1020 | WP_000147914.1 | replication protein | - |
| QJP56_RS14135 (2897984) | 2897984..2898523 | - | 540 | WP_001182881.1 | toxin YdaT domain-containing protein | - |
| QJP56_RS14140 (2898554) | 2898554..2898781 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QJP56_RS14145 (2898892) | 2898892..2899584 | + | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| QJP56_RS14150 (2899665) | 2899665..2900726 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QJP56_RS14155 (2900704) | 2900704..2901081 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QJP56_RS14160 (2901557) | 2901557..2901763 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| QJP56_RS14165 (2901839) | 2901839..2902135 | + | 297 | WP_000995417.1 | host-nuclease inhibitor Gam family protein | - |
| QJP56_RS14170 (2902141) | 2902141..2902926 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QJP56_RS14175 (2902923) | 2902923..2903603 | + | 681 | WP_000186858.1 | YqaJ viral recombinase family protein | - |
| QJP56_RS14180 (2903600) | 2903600..2903782 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| QJP56_RS14185 (2903755) | 2903755..2903946 | + | 192 | WP_000548537.1 | DUF1382 family protein | - |
| QJP56_RS14190 (2904023) | 2904023..2904238 | + | 216 | WP_000188880.1 | hypothetical protein | - |
| QJP56_RS14195 (2904337) | 2904337..2904555 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| QJP56_RS14200 (2904603) | 2904603..2904842 | + | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| QJP56_RS14205 (2904982) | 2904982..2905218 | + | 237 | WP_000088653.1 | excisionase | - |
| QJP56_RS14210 (2905208) | 2905208..2906350 | + | 1143 | WP_000741335.1 | hypothetical protein ; Integrase | Integrase |
| QJP56_RS14215 (2906464) | 2906464..2907714 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| QJP56_RS14220 (2907886) | 2907886..2908539 | + | 654 | WP_001248677.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| QJP56_RS14225 (2908549) | 2908549..2909010 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| QJP56_RS14230 (2909064) | 2909064..2910170 | + | 1107 | WP_001295972.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| QJP56_RS14235 (2910206) | 2910206..2910847 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJP56_RS14240 (2910851) | 2910851..2912221 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJP56_RS14245 (2912390) | 2912390..2913061 | + | 672 | WP_001265481.1 | hypothetical protein | VF |
| QJP56_RS14250 (2913061) | 2913061..2914521 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJP56_RS14255 (2914597) | 2914597..2915718 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJP56_RS14260 (2915767) | 2915767..2916993 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJP56_RS14265 (2917243) | 2917243..2918379 | + | 1137 | WP_000531594.1 | hypothetical protein | VF |
| QJP56_RS14270 (2918363) | 2918363..2919226 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJP56_RS14275 (2919458) | 2919458..2919631 | - | 174 | Protein_2806 | tail fiber assembly protein | - |
| QJP56_RS14280 (2919781) | 2919781..2920449 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJP56_RS14285 (2920504) | 2920504..2921088 | - | 585 | WP_001545928.1 | tail fiber assembly protein | - |
| QJP56_RS14290 (2921088) | 2921088..2924114 | - | 3027 | WP_094315386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP56_RS14295 (2924266) | 2924266..2924865 | - | 600 | WP_044066009.1 | hypothetical protein | VF |
| QJP56_RS14300 (2924933) | 2924933..2928625 | - | 3693 | WP_032198501.1 | phage tail protein | - |
| QJP56_RS14305 (2928969) | 2928969..2929550 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJP56_RS14310 (2929547) | 2929547..2930290 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| QJP56_RS14315 (2930301) | 2930301..2930999 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| QJP56_RS14320 (2930999) | 2930999..2931328 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJP56_RS14325 (2931325) | 2931325..2933886 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJP56_RS14330 (2933867) | 2933867..2934280 | - | 414 | WP_094315422.1 | phage tail assembly protein T | - |
| QJP56_RS14335 (2934307) | 2934307..2934738 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJP56_RS14340 (2934757) | 2934757..2935506 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJP56_RS14345 (2935514) | 2935514..2935909 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJP56_RS14350 (2935906) | 2935906..2936439 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJP56_RS14355 (2936455) | 2936455..2936808 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJP56_RS14360 (2936801) | 2936801..2937175 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP56_RS14365 (2937227) | 2937227..2938255 | - | 1029 | WP_001573716.1 | major capsid protein | - |
| QJP56_RS14370 (2938313) | 2938313..2938660 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJP56_RS14375 (2938697) | 2938697..2940202 | - | 1506 | WP_001253888.1 | S49 family peptidase | - |
| QJP56_RS14380 (2940192) | 2940192..2941784 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP56_RS14385 (2941781) | 2941781..2941987 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP56_RS14390 (2941971) | 2941971..2943899 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP56_RS14395 (2943871) | 2943871..2944380 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP56_RS14400 (2944995) | 2944995..2945132 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP56_RS14405 (2945339) | 2945339..2945665 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP56_RS14410 (2945976) | 2945976..2946443 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP56_RS14415 (2946446) | 2946446..2946577 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP56_RS14420 (2946592) | 2946592..2946774 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP56_RS14425 (2946931) | 2946931..2947464 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP56_RS14430 (2948056) | 2948056..2948391 | - | 336 | Protein_2837 | YdfR family protein | - |
| QJP56_RS14435 (2948396) | 2948396..2948611 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP56_RS14440 (2948761) | 2948761..2948922 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP56_RS14445 (2948922) | 2948922..2949107 | - | 186 | Protein_2840 | DUF1737 domain-containing protein | - |
| QJP56_RS14450 (2949368) | 2949368..2949703 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP56_RS14455 (2949774) | 2949774..2949890 | + | 117 | Protein_2842 | hypothetical protein | - |
| QJP56_RS14460 (2949984) | 2949984..2950115 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP56_RS14475 (2950920) | 2950920..2951969 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP56_RS14480 (2952120) | 2952120..2952317 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP56_RS14485 (2952544) | 2952544..2953365 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP56_RS14490 (2953362) | 2953362..2953742 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP56_RS14495 (2953743) | 2953743..2954798 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP56_RS14500 (2954800) | 2954800..2955078 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP56_RS14505 (2955237) | 2955237..2955311 | - | 75 | Protein_2850 | hypothetical protein | - |
| QJP56_RS14510 (2955469) | 2955469..2956572 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP56_RS14515 (2956553) | 2956553..2957203 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP56_RS14520 (2957369) | 2957369..2957524 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP56_RS14525 (2957816) | 2957816..2958160 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP56_RS14530 (2958157) | 2958157..2958324 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP56_RS14535 (2958335) | 2958335..2958598 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP56_RS14540 (2958600) | 2958600..2958818 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP56_RS14545 (2958820) | 2958820..2959035 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP56_RS14550 (2959036) | 2959036..2959395 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP56_RS14555 (2959392) | 2959392..2959568 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP56_RS14560 (2959561) | 2959561..2959743 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP56_RS14565 (2959872) | 2959872..2960183 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP56_RS14570 (2960176) | 2960176..2960430 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP56_RS14575 (2960427) | 2960427..2960849 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP56_RS14580 (2960890) | 2960890..2961852 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP56_RS14585 (2961875) | 2961875..2962300 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP56_RS14590 (2962297) | 2962297..2962599 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP56_RS14595 (2962698) | 2962698..2963069 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP56_RS14600 (2963090) | 2963090..2963281 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP56_RS14605 (2963283) | 2963283..2963561 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP56_RS14610 (2963853) | 2963853..2964005 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP56_RS14615 (2964017) | 2964017..2964355 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP56_RS14620 (2964344) | 2964344..2964538 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP56_RS14625 (2965105) | 2965105..2965293 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP56_RS14630 (2965290) | 2965290..2965478 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP56_RS14635 (2965574) | 2965574..2968045 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP56_RS14640 (2968107) | 2968107..2968376 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP56_RS14645 (2968345) | 2968345..2969463 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP56_RS14650 (2969630) | 2969630..2970424 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP56_RS14655 (2970421) | 2970421..2971467 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP56_RS14660 (2971525) | 2971525..2971986 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP56_RS14665 (2971983) | 2971983..2972771 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP56_RS14670 (2972909) | 2972909..2973730 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP56_RS14675 (2973746) | 2973746..2974657 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP56_RS14680 (2974686) | 2974686..2975930 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP56_RS14685 (2975930) | 2975930..2976631 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP56_RS14690 (2976624) | 2976624..2977823 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJP56_RS14695 (2978084) | 2978084..2979157 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|