MGE detailed information
MGE type: Prophage MGE length: 120778 bp
Accession: NZ_CP124343 Location: 2857527..2978304 Organism: Escherichia coli strain AVS0533 Replicon: chromosome
Accession: NZ_CP124343 Location: 2857527..2978304 Organism: Escherichia coli strain AVS0533 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP85_RS13835 (2853638) | 2853638..2853886 | - | 249 | WP_001531618.1 | protein YmgC | - |
| QJP85_RS13840 (2853999) | 2853999..2854265 | - | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| QJP85_RS13845 (2854294) | 2854294..2854566 | - | 273 | WP_000858012.1 | hypothetical protein | - |
| QJP85_RS13850 (2854609) | 2854609..2854845 | - | 237 | WP_000554153.1 | regulatory protein YcgZ | - |
| QJP85_RS13855 (2855159) | 2855159..2856370 | + | 1212 | WP_001311624.1 | blue light-responsive regulator BluF | - |
| QJP85_RS13860 (2856575) | 2856575..2857306 | + | 732 | WP_000332288.1 | DNA-binding transcriptional repressor BluR | - |
| QJP85_RS13865 (2857527) | 2857527..2857931 | + | 405 | WP_000373104.1 | DUF1398 domain-containing protein | - |
| QJP85_RS13870 (2857984) | 2857984..2858109 | + | 126 | WP_023146274.1 | hypothetical protein | - |
| QJP85_RS13875 (2858193) | 2858193..2858360 | - | 168 | Protein_2726 | isocitrate/isopropylmalate family dehydrogenase | - |
| QJP85_RS13885 (2860049) | 2860049..2860963 | + | 915 | WP_001256622.1 | hypothetical protein | VF |
| QJP85_RS13890 (2860963) | 2860963..2861790 | + | 828 | WP_000983701.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP85_RS13895 (2861787) | 2861787..2862644 | + | 858 | WP_001101732.1 | hypothetical protein | ARG |
| QJP85_RS13900 (2862641) | 2862641..2863498 | + | 858 | WP_000968127.1 | hypothetical protein | ARG |
| QJP85_RS13905 (2863590) | 2863590..2863883 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| QJP85_RS13910 (2863896) | 2863896..2864174 | - | 279 | WP_000654168.1 | hypothetical protein | - |
| QJP85_RS13915 (2864342) | 2864342..2865955 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP85_RS13920 (2865986) | 2865986..2866336 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP85_RS13925 (2866333) | 2866333..2866758 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP85_RS13930 (2866840) | 2866840..2868768 | - | 1929 | WP_001545960.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP85_RS13935 (2868827) | 2868827..2872225 | - | 3399 | WP_001545959.1 | host specificity protein J | - |
| QJP85_RS13940 (2872286) | 2872286..2872858 | - | 573 | WP_001545958.1 | tail assembly protein | - |
| QJP85_RS13945 (2872855) | 2872855..2873598 | - | 744 | WP_000194748.1 | C40 family peptidase | - |
| QJP85_RS13950 (2873604) | 2873604..2874302 | - | 699 | WP_001152542.1 | phage minor tail protein L | - |
| QJP85_RS13955 (2874302) | 2874302..2874631 | - | 330 | WP_000847387.1 | phage tail protein | - |
| QJP85_RS13960 (2874628) | 2874628..2877189 | - | 2562 | WP_000840282.1 | phage tail tape measure protein | - |
| QJP85_RS13965 (2877182) | 2877182..2877616 | - | 435 | WP_000459449.1 | phage tail assembly protein T | - |
| QJP85_RS13970 (2877598) | 2877598..2878020 | - | 423 | WP_000479204.1 | phage minor tail protein G | - |
| QJP85_RS13975 (2878036) | 2878036..2878776 | - | 741 | WP_001545921.1 | phage tail protein | - |
| QJP85_RS13980 (2878784) | 2878784..2879179 | - | 396 | WP_000683150.1 | phage minor tail U family protein | - |
| QJP85_RS13985 (2879176) | 2879176..2879754 | - | 579 | WP_001007370.1 | phage tail protein | - |
| QJP85_RS13990 (2879766) | 2879766..2880119 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| QJP85_RS13995 (2880112) | 2880112..2880486 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP85_RS14000 (2880538) | 2880538..2881566 | - | 1029 | WP_000522650.1 | major capsid protein | - |
| QJP85_RS14005 (2881624) | 2881624..2881971 | - | 348 | WP_000256813.1 | head decoration protein | - |
| QJP85_RS14010 (2882008) | 2882008..2883513 | - | 1506 | WP_001253893.1 | S49 family peptidase | - |
| QJP85_RS14015 (2883503) | 2883503..2885095 | - | 1593 | Protein_2754 | phage portal protein | - |
| QJP85_RS14020 (2885092) | 2885092..2885298 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| QJP85_RS14025 (2885282) | 2885282..2887210 | - | 1929 | WP_001573719.1 | phage terminase large subunit family protein | - |
| QJP85_RS14030 (2887182) | 2887182..2887730 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| QJP85_RS14035 (2887812) | 2887812..2888090 | - | 279 | WP_012896773.1 | hypothetical protein | - |
| QJP85_RS14040 (2888041) | 2888041..2888223 | + | 183 | WP_001205136.1 | hypothetical protein | - |
| QJP85_RS14045 (2888322) | 2888322..2888696 | - | 375 | WP_000084844.1 | hypothetical protein | - |
| QJP85_RS14050 (2888735) | 2888735..2889178 | - | 444 | WP_001441931.1 | lysis protein | - |
| QJP85_RS14055 (2889175) | 2889175..2889672 | - | 498 | WP_000075094.1 | lysozyme RrrD | - |
| QJP85_RS14060 (2889672) | 2889672..2889887 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QJP85_RS14065 (2890477) | 2890477..2891559 | + | 1083 | WP_000737277.1 | porin OmpC | - |
| QJP85_RS14070 (2891748) | 2891748..2892131 | - | 384 | WP_001204794.1 | antitermination protein QuuD | - |
| QJP85_RS14075 (2892217) | 2892217..2892357 | - | 141 | WP_000971095.1 | YlcG family protein | - |
| QJP85_RS14080 (2892354) | 2892354..2892716 | - | 363 | WP_001099697.1 | crossover junction endodeoxyribonuclease RusA | - |
| QJP85_RS14085 (2892713) | 2892713..2893003 | - | 291 | WP_000774475.1 | DUF1364 domain-containing protein | - |
| QJP85_RS14090 (2892996) | 2892996..2893166 | - | 171 | WP_000224907.1 | NinE family protein | - |
| QJP85_RS14095 (2893166) | 2893166..2893621 | - | 456 | WP_001053004.1 | DNA base-flipping protein YbcN | - |
| QJP85_RS14100 (2893618) | 2893618..2893719 | - | 102 | WP_072093903.1 | hypothetical protein | - |
| QJP85_RS14105 (2894069) | 2894069..2895112 | + | 1044 | WP_000700204.1 | alpha/beta hydrolase | - |
| QJP85_RS14110 (2895462) | 2895462..2896988 | - | 1527 | WP_000709098.1 | Ycf53-like protein ; Integrase | Integrase |
| QJP85_RS14115 (2897046) | 2897046..2897195 | - | 150 | WP_032143398.1 | hypothetical protein | - |
| QJP85_RS14120 (2897244) | 2897244..2897576 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| QJP85_RS14125 (2897644) | 2897644..2897946 | - | 303 | WP_000145918.1 | protein ren | - |
| QJP85_RS14130 (2897943) | 2897943..2898644 | - | 702 | WP_000788877.1 | replication protein P | - |
| QJP85_RS14135 (2898641) | 2898641..2899660 | - | 1020 | WP_000147914.1 | replication protein | - |
| QJP85_RS14140 (2899657) | 2899657..2900196 | - | 540 | WP_001182881.1 | toxin YdaT domain-containing protein | - |
| QJP85_RS14145 (2900227) | 2900227..2900454 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QJP85_RS14150 (2900565) | 2900565..2901257 | + | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| QJP85_RS14155 (2901338) | 2901338..2902399 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QJP85_RS14160 (2902377) | 2902377..2902754 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QJP85_RS14165 (2903230) | 2903230..2903436 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| QJP85_RS14170 (2903512) | 2903512..2903808 | + | 297 | WP_000995417.1 | host-nuclease inhibitor Gam family protein | - |
| QJP85_RS14175 (2903814) | 2903814..2904599 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QJP85_RS14180 (2904596) | 2904596..2905276 | + | 681 | WP_000186858.1 | YqaJ viral recombinase family protein | - |
| QJP85_RS14185 (2905273) | 2905273..2905455 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| QJP85_RS14190 (2905428) | 2905428..2905619 | + | 192 | WP_000548537.1 | DUF1382 family protein | - |
| QJP85_RS14195 (2905696) | 2905696..2905911 | + | 216 | WP_000188880.1 | hypothetical protein | - |
| QJP85_RS14200 (2906010) | 2906010..2906228 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| QJP85_RS14205 (2906276) | 2906276..2906515 | + | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| QJP85_RS14210 (2906655) | 2906655..2906891 | + | 237 | WP_000088653.1 | excisionase | - |
| QJP85_RS14215 (2906881) | 2906881..2908023 | + | 1143 | WP_000741335.1 | hypothetical protein ; Integrase | Integrase |
| QJP85_RS14220 (2908137) | 2908137..2909387 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| QJP85_RS14225 (2909559) | 2909559..2910212 | + | 654 | WP_001248677.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| QJP85_RS14230 (2910222) | 2910222..2910683 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| QJP85_RS14235 (2910737) | 2910737..2911843 | + | 1107 | WP_001295972.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| QJP85_RS14240 (2911879) | 2911879..2912520 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJP85_RS14245 (2912524) | 2912524..2913894 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJP85_RS14250 (2914063) | 2914063..2914734 | + | 672 | WP_001265481.1 | Phytochrome-like protein cph2 | VF |
| QJP85_RS14255 (2914734) | 2914734..2916194 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJP85_RS14260 (2916270) | 2916270..2917391 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJP85_RS14265 (2917440) | 2917440..2918666 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJP85_RS14270 (2918916) | 2918916..2920052 | + | 1137 | WP_000531594.1 | dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase | VF |
| QJP85_RS14275 (2920036) | 2920036..2920899 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJP85_RS14280 (2921131) | 2921131..2921304 | - | 174 | Protein_2807 | tail fiber assembly protein | - |
| QJP85_RS14285 (2921454) | 2921454..2922122 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJP85_RS14290 (2922177) | 2922177..2922761 | - | 585 | WP_001545928.1 | tail fiber assembly protein | - |
| QJP85_RS14295 (2922761) | 2922761..2925787 | - | 3027 | WP_094315386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP85_RS14300 (2925939) | 2925939..2926538 | - | 600 | WP_044066009.1 | Outer membrane protein X | VF |
| QJP85_RS14305 (2926606) | 2926606..2930298 | - | 3693 | WP_032198501.1 | phage tail protein | - |
| QJP85_RS14310 (2930642) | 2930642..2931223 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJP85_RS14315 (2931220) | 2931220..2931963 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| QJP85_RS14320 (2931974) | 2931974..2932672 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| QJP85_RS14325 (2932672) | 2932672..2933001 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJP85_RS14330 (2932998) | 2932998..2935559 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJP85_RS14335 (2935540) | 2935540..2935953 | - | 414 | WP_094315422.1 | phage tail assembly protein T | - |
| QJP85_RS14340 (2935980) | 2935980..2936411 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJP85_RS14345 (2936430) | 2936430..2937179 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJP85_RS14350 (2937187) | 2937187..2937582 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJP85_RS14355 (2937579) | 2937579..2938112 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJP85_RS14360 (2938128) | 2938128..2938481 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJP85_RS14365 (2938474) | 2938474..2938848 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP85_RS14370 (2938900) | 2938900..2939928 | - | 1029 | WP_001573716.1 | major capsid protein | - |
| QJP85_RS14375 (2939986) | 2939986..2940333 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJP85_RS14380 (2940370) | 2940370..2941875 | - | 1506 | WP_001253888.1 | S49 family peptidase | - |
| QJP85_RS14385 (2941865) | 2941865..2943457 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP85_RS14390 (2943454) | 2943454..2943660 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP85_RS14395 (2943644) | 2943644..2945572 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP85_RS14400 (2945544) | 2945544..2946053 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP85_RS14405 (2946668) | 2946668..2946805 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJP85_RS14410 (2947012) | 2947012..2947338 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP85_RS14415 (2947649) | 2947649..2948116 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP85_RS14420 (2948119) | 2948119..2948250 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP85_RS14425 (2948265) | 2948265..2948447 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP85_RS14430 (2948604) | 2948604..2949137 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP85_RS14435 (2949729) | 2949729..2950064 | - | 336 | Protein_2838 | YdfR family protein | - |
| QJP85_RS14440 (2950069) | 2950069..2950284 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP85_RS14445 (2950434) | 2950434..2950595 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP85_RS14450 (2950595) | 2950595..2950780 | - | 186 | Protein_2841 | DUF1737 domain-containing protein | - |
| QJP85_RS14455 (2951041) | 2951041..2951376 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP85_RS14460 (2951447) | 2951447..2951563 | + | 117 | Protein_2843 | hypothetical protein | - |
| QJP85_RS14465 (2951657) | 2951657..2951788 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP85_RS14480 (2952593) | 2952593..2953642 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP85_RS14485 (2953793) | 2953793..2953990 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP85_RS14490 (2954217) | 2954217..2955038 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP85_RS14495 (2955035) | 2955035..2955415 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP85_RS14500 (2955416) | 2955416..2956471 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP85_RS14505 (2956473) | 2956473..2956751 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP85_RS14510 (2956910) | 2956910..2956984 | - | 75 | Protein_2851 | hypothetical protein | - |
| QJP85_RS14515 (2957142) | 2957142..2958245 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP85_RS14520 (2958226) | 2958226..2958876 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP85_RS14525 (2959042) | 2959042..2959197 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP85_RS14530 (2959489) | 2959489..2959833 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP85_RS14535 (2959830) | 2959830..2959997 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP85_RS14540 (2960008) | 2960008..2960271 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP85_RS14545 (2960273) | 2960273..2960491 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP85_RS14550 (2960493) | 2960493..2960708 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP85_RS14555 (2960709) | 2960709..2961068 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP85_RS14560 (2961065) | 2961065..2961241 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP85_RS14565 (2961234) | 2961234..2961416 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP85_RS14570 (2961545) | 2961545..2961856 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP85_RS14575 (2961849) | 2961849..2962103 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP85_RS14580 (2962100) | 2962100..2962522 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP85_RS14585 (2962563) | 2962563..2963525 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP85_RS14590 (2963548) | 2963548..2963973 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP85_RS14595 (2963970) | 2963970..2964272 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP85_RS14600 (2964371) | 2964371..2964742 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP85_RS14605 (2964763) | 2964763..2964954 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP85_RS14610 (2964956) | 2964956..2965234 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP85_RS14615 (2965526) | 2965526..2965678 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP85_RS14620 (2965690) | 2965690..2966028 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP85_RS14625 (2966017) | 2966017..2966211 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP85_RS14630 (2966778) | 2966778..2966966 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP85_RS14635 (2966963) | 2966963..2967151 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP85_RS14640 (2967247) | 2967247..2969718 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP85_RS14645 (2969780) | 2969780..2970049 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP85_RS14650 (2970018) | 2970018..2971136 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP85_RS14655 (2971303) | 2971303..2972097 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP85_RS14660 (2972094) | 2972094..2973140 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP85_RS14665 (2973198) | 2973198..2973659 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP85_RS14670 (2973656) | 2973656..2974444 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP85_RS14675 (2974582) | 2974582..2975403 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP85_RS14680 (2975419) | 2975419..2976330 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP85_RS14685 (2976359) | 2976359..2977603 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP85_RS14690 (2977603) | 2977603..2978304 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJP85_RS14695 (2978297) | 2978297..2979496 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJP85_RS14700 (2979757) | 2979757..2980830 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|