Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2964763..2965234 | Replicon | chromosome |
| Accession | NZ_CP124343 | ||
| Organism | Escherichia coli strain AVS0533 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJP85_RS14610 | Protein ID | WP_001303511.1 |
| Coordinates | 2964956..2965234 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJP85_RS14605 | Protein ID | WP_001302048.1 |
| Coordinates | 2964763..2964954 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP85_RS14535 (2959830) | 2959830..2959997 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP85_RS14540 (2960008) | 2960008..2960271 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP85_RS14545 (2960273) | 2960273..2960491 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP85_RS14550 (2960493) | 2960493..2960708 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP85_RS14555 (2960709) | 2960709..2961068 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP85_RS14560 (2961065) | 2961065..2961241 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP85_RS14565 (2961234) | 2961234..2961416 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP85_RS14570 (2961545) | 2961545..2961856 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP85_RS14575 (2961849) | 2961849..2962103 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP85_RS14580 (2962100) | 2962100..2962522 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP85_RS14585 (2962563) | 2962563..2963525 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP85_RS14590 (2963548) | 2963548..2963973 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP85_RS14595 (2963970) | 2963970..2964272 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP85_RS14600 (2964371) | 2964371..2964742 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP85_RS14605 (2964763) | 2964763..2964954 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJP85_RS14610 (2964956) | 2964956..2965234 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJP85_RS14615 (2965526) | 2965526..2965678 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP85_RS14620 (2965690) | 2965690..2966028 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP85_RS14625 (2966017) | 2966017..2966211 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP85_RS14630 (2966778) | 2966778..2966966 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP85_RS14635 (2966963) | 2966963..2967151 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP85_RS14640 (2967247) | 2967247..2969718 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP85_RS14645 (2969780) | 2969780..2970049 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | sitABCD | - | 2857527..2978304 | 120777 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|