MGE detailed information
MGE type: Prophage MGE length: 120778 bp
Accession: NZ_CP124341 Location: 2829029..2949806 Organism: Escherichia coli strain AVS0710 Replicon: chromosome
Accession: NZ_CP124341 Location: 2829029..2949806 Organism: Escherichia coli strain AVS0710 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB06_RS13690 (2825140) | 2825140..2825388 | - | 249 | WP_001531618.1 | protein YmgC | - |
| QJB06_RS13695 (2825501) | 2825501..2825767 | - | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| QJB06_RS13700 (2825796) | 2825796..2826068 | - | 273 | WP_000858012.1 | hypothetical protein | - |
| QJB06_RS13705 (2826111) | 2826111..2826347 | - | 237 | WP_000554153.1 | regulatory protein YcgZ | - |
| QJB06_RS13710 (2826661) | 2826661..2827872 | + | 1212 | WP_001311624.1 | blue light-responsive regulator BluF | - |
| QJB06_RS13715 (2828077) | 2828077..2828808 | + | 732 | WP_000332288.1 | DNA-binding transcriptional repressor BluR | - |
| QJB06_RS13720 (2829029) | 2829029..2829433 | + | 405 | WP_000373104.1 | DUF1398 domain-containing protein | - |
| QJB06_RS13725 (2829486) | 2829486..2829611 | + | 126 | WP_023146274.1 | hypothetical protein | - |
| QJB06_RS13730 (2829695) | 2829695..2829862 | - | 168 | Protein_2700 | isocitrate/isopropylmalate family dehydrogenase | - |
| QJB06_RS13740 (2831551) | 2831551..2832465 | + | 915 | WP_001256622.1 | hypothetical protein | VF |
| QJB06_RS13745 (2832465) | 2832465..2833292 | + | 828 | WP_000983701.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJB06_RS13750 (2833289) | 2833289..2834146 | + | 858 | WP_001101732.1 | hypothetical protein | ARG |
| QJB06_RS13755 (2834143) | 2834143..2835000 | + | 858 | WP_000968127.1 | hypothetical protein | ARG |
| QJB06_RS13760 (2835092) | 2835092..2835385 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| QJB06_RS13765 (2835398) | 2835398..2835676 | - | 279 | WP_000654168.1 | hypothetical protein | - |
| QJB06_RS13770 (2835844) | 2835844..2837457 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJB06_RS13775 (2837488) | 2837488..2837838 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJB06_RS13780 (2837835) | 2837835..2838260 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJB06_RS13785 (2838342) | 2838342..2840270 | - | 1929 | WP_001545960.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJB06_RS13790 (2840329) | 2840329..2843727 | - | 3399 | WP_001545959.1 | host specificity protein J | - |
| QJB06_RS13795 (2843788) | 2843788..2844360 | - | 573 | WP_001545958.1 | tail assembly protein | - |
| QJB06_RS13800 (2844357) | 2844357..2845100 | - | 744 | WP_000194748.1 | C40 family peptidase | - |
| QJB06_RS13805 (2845106) | 2845106..2845804 | - | 699 | WP_001152542.1 | phage minor tail protein L | - |
| QJB06_RS13810 (2845804) | 2845804..2846133 | - | 330 | WP_000847387.1 | phage tail protein | - |
| QJB06_RS13815 (2846130) | 2846130..2848691 | - | 2562 | WP_000840282.1 | phage tail tape measure protein | - |
| QJB06_RS13820 (2848684) | 2848684..2849118 | - | 435 | WP_000459449.1 | phage tail assembly protein T | - |
| QJB06_RS13825 (2849100) | 2849100..2849522 | - | 423 | WP_000479204.1 | phage minor tail protein G | - |
| QJB06_RS13830 (2849538) | 2849538..2850278 | - | 741 | WP_001545921.1 | phage tail protein | - |
| QJB06_RS13835 (2850286) | 2850286..2850681 | - | 396 | WP_000683150.1 | phage minor tail U family protein | - |
| QJB06_RS13840 (2850678) | 2850678..2851256 | - | 579 | WP_001007370.1 | phage tail protein | - |
| QJB06_RS13845 (2851268) | 2851268..2851621 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| QJB06_RS13850 (2851614) | 2851614..2851988 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJB06_RS13855 (2852040) | 2852040..2853068 | - | 1029 | WP_000522650.1 | major capsid protein | - |
| QJB06_RS13860 (2853126) | 2853126..2853473 | - | 348 | WP_000256813.1 | head decoration protein | - |
| QJB06_RS13865 (2853510) | 2853510..2855015 | - | 1506 | WP_001253893.1 | S49 family peptidase | - |
| QJB06_RS13870 (2855005) | 2855005..2856597 | - | 1593 | Protein_2728 | phage portal protein | - |
| QJB06_RS13875 (2856594) | 2856594..2856800 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| QJB06_RS13880 (2856784) | 2856784..2858712 | - | 1929 | WP_001573719.1 | phage terminase large subunit family protein | - |
| QJB06_RS13885 (2858684) | 2858684..2859232 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| QJB06_RS13890 (2859314) | 2859314..2859592 | - | 279 | WP_012896773.1 | hypothetical protein | - |
| QJB06_RS13895 (2859543) | 2859543..2859725 | + | 183 | WP_001205136.1 | hypothetical protein | - |
| QJB06_RS13900 (2859824) | 2859824..2860198 | - | 375 | WP_000084844.1 | hypothetical protein | - |
| QJB06_RS13905 (2860237) | 2860237..2860680 | - | 444 | WP_001441931.1 | lysis protein | - |
| QJB06_RS13910 (2860677) | 2860677..2861174 | - | 498 | WP_000075094.1 | lysozyme RrrD | - |
| QJB06_RS13915 (2861174) | 2861174..2861389 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QJB06_RS13920 (2861979) | 2861979..2863061 | + | 1083 | WP_000737277.1 | porin OmpC | - |
| QJB06_RS13925 (2863250) | 2863250..2863633 | - | 384 | WP_001204794.1 | antitermination protein QuuD | - |
| QJB06_RS13930 (2863719) | 2863719..2863859 | - | 141 | WP_000971095.1 | YlcG family protein | - |
| QJB06_RS13935 (2863856) | 2863856..2864218 | - | 363 | WP_001099697.1 | crossover junction endodeoxyribonuclease RusA | - |
| QJB06_RS13940 (2864215) | 2864215..2864505 | - | 291 | WP_000774475.1 | DUF1364 domain-containing protein | - |
| QJB06_RS13945 (2864498) | 2864498..2864668 | - | 171 | WP_000224907.1 | NinE family protein | - |
| QJB06_RS13950 (2864668) | 2864668..2865123 | - | 456 | WP_001053004.1 | DNA base-flipping protein YbcN | - |
| QJB06_RS13955 (2865120) | 2865120..2865221 | - | 102 | WP_072093903.1 | hypothetical protein | - |
| QJB06_RS13960 (2865571) | 2865571..2866614 | + | 1044 | WP_000700204.1 | alpha/beta hydrolase | - |
| QJB06_RS13965 (2866964) | 2866964..2868490 | - | 1527 | WP_000709098.1 | hypothetical protein ; Integrase | Integrase |
| QJB06_RS13970 (2868548) | 2868548..2868697 | - | 150 | WP_032143398.1 | hypothetical protein | - |
| QJB06_RS13975 (2868746) | 2868746..2869078 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| QJB06_RS13980 (2869146) | 2869146..2869448 | - | 303 | WP_000145918.1 | protein ren | - |
| QJB06_RS13985 (2869445) | 2869445..2870146 | - | 702 | WP_000788877.1 | replication protein P | - |
| QJB06_RS13990 (2870143) | 2870143..2871162 | - | 1020 | WP_000147914.1 | replication protein | - |
| QJB06_RS13995 (2871159) | 2871159..2871698 | - | 540 | WP_001182881.1 | toxin YdaT domain-containing protein | - |
| QJB06_RS14000 (2871729) | 2871729..2871956 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QJB06_RS14005 (2872067) | 2872067..2872759 | + | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| QJB06_RS14010 (2872840) | 2872840..2873901 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QJB06_RS14015 (2873879) | 2873879..2874256 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QJB06_RS14020 (2874732) | 2874732..2874938 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| QJB06_RS14025 (2875014) | 2875014..2875310 | + | 297 | WP_000995417.1 | host-nuclease inhibitor Gam family protein | - |
| QJB06_RS14030 (2875316) | 2875316..2876101 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QJB06_RS14035 (2876098) | 2876098..2876778 | + | 681 | WP_000186858.1 | YqaJ viral recombinase family protein | - |
| QJB06_RS14040 (2876775) | 2876775..2876957 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| QJB06_RS14045 (2876930) | 2876930..2877121 | + | 192 | WP_000548537.1 | DUF1382 family protein | - |
| QJB06_RS14050 (2877198) | 2877198..2877413 | + | 216 | WP_000188880.1 | hypothetical protein | - |
| QJB06_RS14055 (2877512) | 2877512..2877730 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| QJB06_RS14060 (2877778) | 2877778..2878017 | + | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| QJB06_RS14065 (2878157) | 2878157..2878393 | + | 237 | WP_000088653.1 | excisionase | - |
| QJB06_RS14070 (2878383) | 2878383..2879525 | + | 1143 | WP_000741335.1 | hypothetical protein ; Integrase | Integrase |
| QJB06_RS14075 (2879639) | 2879639..2880889 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| QJB06_RS14080 (2881061) | 2881061..2881714 | + | 654 | WP_001248677.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| QJB06_RS14085 (2881724) | 2881724..2882185 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| QJB06_RS14090 (2882239) | 2882239..2883345 | + | 1107 | WP_001295972.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| QJB06_RS14095 (2883381) | 2883381..2884022 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJB06_RS14100 (2884026) | 2884026..2885396 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJB06_RS14105 (2885565) | 2885565..2886236 | + | 672 | WP_001265481.1 | Regulator of RpoS | VF |
| QJB06_RS14110 (2886236) | 2886236..2887696 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJB06_RS14115 (2887772) | 2887772..2888893 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJB06_RS14120 (2888942) | 2888942..2890168 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJB06_RS14125 (2890418) | 2890418..2891554 | + | 1137 | WP_000531594.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJB06_RS14130 (2891538) | 2891538..2892401 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJB06_RS14135 (2892633) | 2892633..2892806 | - | 174 | Protein_2781 | tail fiber assembly protein | - |
| QJB06_RS14140 (2892956) | 2892956..2893624 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJB06_RS14145 (2893679) | 2893679..2894263 | - | 585 | WP_001545928.1 | tail fiber assembly protein | - |
| QJB06_RS14150 (2894263) | 2894263..2897289 | - | 3027 | WP_094315386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJB06_RS14155 (2897441) | 2897441..2898040 | - | 600 | WP_044066009.1 | hypothetical protein | VF |
| QJB06_RS14160 (2898108) | 2898108..2901800 | - | 3693 | WP_032198501.1 | phage tail protein | - |
| QJB06_RS14165 (2902144) | 2902144..2902725 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJB06_RS14170 (2902722) | 2902722..2903465 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| QJB06_RS14175 (2903476) | 2903476..2904174 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| QJB06_RS14180 (2904174) | 2904174..2904503 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJB06_RS14185 (2904500) | 2904500..2907061 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJB06_RS14190 (2907042) | 2907042..2907455 | - | 414 | WP_094315422.1 | phage tail assembly protein T | - |
| QJB06_RS14195 (2907482) | 2907482..2907913 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJB06_RS14200 (2907932) | 2907932..2908681 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJB06_RS14205 (2908689) | 2908689..2909084 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJB06_RS14210 (2909081) | 2909081..2909614 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJB06_RS14215 (2909630) | 2909630..2909983 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJB06_RS14220 (2909976) | 2909976..2910350 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJB06_RS14225 (2910402) | 2910402..2911430 | - | 1029 | WP_001573716.1 | major capsid protein | - |
| QJB06_RS14230 (2911488) | 2911488..2911835 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJB06_RS14235 (2911872) | 2911872..2913377 | - | 1506 | WP_001253888.1 | S49 family peptidase | - |
| QJB06_RS14240 (2913367) | 2913367..2914959 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJB06_RS14245 (2914956) | 2914956..2915162 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJB06_RS14250 (2915146) | 2915146..2917074 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJB06_RS14255 (2917046) | 2917046..2917555 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJB06_RS14260 (2918170) | 2918170..2918307 | - | 138 | WP_000881609.1 | hypothetical protein | - |
| QJB06_RS14265 (2918514) | 2918514..2918840 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJB06_RS14270 (2919151) | 2919151..2919618 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJB06_RS14275 (2919621) | 2919621..2919752 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJB06_RS14280 (2919767) | 2919767..2919949 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJB06_RS14285 (2920106) | 2920106..2920639 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJB06_RS14290 (2921231) | 2921231..2921566 | - | 336 | Protein_2812 | YdfR family protein | - |
| QJB06_RS14295 (2921571) | 2921571..2921786 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJB06_RS14300 (2921936) | 2921936..2922097 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJB06_RS14305 (2922097) | 2922097..2922282 | - | 186 | Protein_2815 | DUF1737 domain-containing protein | - |
| QJB06_RS14310 (2922543) | 2922543..2922878 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJB06_RS14315 (2922949) | 2922949..2923065 | + | 117 | Protein_2817 | hypothetical protein | - |
| QJB06_RS14320 (2923159) | 2923159..2923290 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJB06_RS14335 (2924095) | 2924095..2925144 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJB06_RS14340 (2925295) | 2925295..2925492 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJB06_RS14345 (2925719) | 2925719..2926540 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJB06_RS14350 (2926537) | 2926537..2926917 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJB06_RS14355 (2926918) | 2926918..2927973 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJB06_RS14360 (2927975) | 2927975..2928253 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJB06_RS14365 (2928412) | 2928412..2928486 | - | 75 | Protein_2825 | hypothetical protein | - |
| QJB06_RS14370 (2928644) | 2928644..2929747 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJB06_RS14375 (2929728) | 2929728..2930378 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJB06_RS14380 (2930544) | 2930544..2930699 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJB06_RS14385 (2930991) | 2930991..2931335 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJB06_RS14390 (2931332) | 2931332..2931499 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJB06_RS14395 (2931510) | 2931510..2931773 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJB06_RS14400 (2931775) | 2931775..2931993 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJB06_RS14405 (2931995) | 2931995..2932210 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJB06_RS14410 (2932211) | 2932211..2932570 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJB06_RS14415 (2932567) | 2932567..2932743 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJB06_RS14420 (2932736) | 2932736..2932918 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJB06_RS14425 (2933047) | 2933047..2933358 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJB06_RS14430 (2933351) | 2933351..2933605 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJB06_RS14435 (2933602) | 2933602..2934024 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJB06_RS14440 (2934065) | 2934065..2935027 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJB06_RS14445 (2935050) | 2935050..2935475 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJB06_RS14450 (2935472) | 2935472..2935774 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJB06_RS14455 (2935873) | 2935873..2936244 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJB06_RS14460 (2936265) | 2936265..2936456 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJB06_RS14465 (2936458) | 2936458..2936736 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJB06_RS14470 (2937028) | 2937028..2937180 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJB06_RS14475 (2937192) | 2937192..2937530 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJB06_RS14480 (2937519) | 2937519..2937713 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJB06_RS14485 (2938280) | 2938280..2938468 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJB06_RS14490 (2938465) | 2938465..2938653 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJB06_RS14495 (2938749) | 2938749..2941220 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJB06_RS14500 (2941282) | 2941282..2941551 | + | 270 | WP_000003742.1 | excisionase | - |
| QJB06_RS14505 (2941520) | 2941520..2942638 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJB06_RS14510 (2942805) | 2942805..2943599 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJB06_RS14515 (2943596) | 2943596..2944642 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJB06_RS14520 (2944700) | 2944700..2945161 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJB06_RS14525 (2945158) | 2945158..2945946 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJB06_RS14530 (2946084) | 2946084..2946905 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJB06_RS14535 (2946921) | 2946921..2947832 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJB06_RS14540 (2947861) | 2947861..2949105 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJB06_RS14545 (2949105) | 2949105..2949806 | - | 702 | WP_001033695.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| QJB06_RS14550 (2949799) | 2949799..2950998 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJB06_RS14555 (2951259) | 2951259..2952332 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|