Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2936265..2936736 | Replicon | chromosome |
| Accession | NZ_CP124341 | ||
| Organism | Escherichia coli strain AVS0710 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | QJB06_RS14465 | Protein ID | WP_001303511.1 |
| Coordinates | 2936458..2936736 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | QJB06_RS14460 | Protein ID | WP_001302048.1 |
| Coordinates | 2936265..2936456 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJB06_RS14390 (2931332) | 2931332..2931499 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJB06_RS14395 (2931510) | 2931510..2931773 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJB06_RS14400 (2931775) | 2931775..2931993 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJB06_RS14405 (2931995) | 2931995..2932210 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJB06_RS14410 (2932211) | 2932211..2932570 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJB06_RS14415 (2932567) | 2932567..2932743 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJB06_RS14420 (2932736) | 2932736..2932918 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJB06_RS14425 (2933047) | 2933047..2933358 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJB06_RS14430 (2933351) | 2933351..2933605 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJB06_RS14435 (2933602) | 2933602..2934024 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJB06_RS14440 (2934065) | 2934065..2935027 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJB06_RS14445 (2935050) | 2935050..2935475 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJB06_RS14450 (2935472) | 2935472..2935774 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJB06_RS14455 (2935873) | 2935873..2936244 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJB06_RS14460 (2936265) | 2936265..2936456 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| QJB06_RS14465 (2936458) | 2936458..2936736 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| QJB06_RS14470 (2937028) | 2937028..2937180 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJB06_RS14475 (2937192) | 2937192..2937530 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJB06_RS14480 (2937519) | 2937519..2937713 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJB06_RS14485 (2938280) | 2938280..2938468 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJB06_RS14490 (2938465) | 2938465..2938653 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJB06_RS14495 (2938749) | 2938749..2941220 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJB06_RS14500 (2941282) | 2941282..2941551 | + | 270 | WP_000003742.1 | excisionase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2890418..2949806 | 59388 | |
| - | inside | Prophage | sitABCD | - | 2829029..2949806 | 120777 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|