MGE detailed information
MGE type: Prophage MGE length: 120778 bp
Accession: NZ_CP124337 Location: 2839502..2960279 Organism: Escherichia coli strain AVS0971 Replicon: chromosome
Accession: NZ_CP124337 Location: 2839502..2960279 Organism: Escherichia coli strain AVS0971 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QJP90_RS13715 (2835613) | 2835613..2835861 | - | 249 | WP_001531618.1 | protein YmgC | - |
| QJP90_RS13720 (2835974) | 2835974..2836240 | - | 267 | WP_000888771.1 | biofilm/acid-resistance regulator AriR | - |
| QJP90_RS13725 (2836269) | 2836269..2836541 | - | 273 | WP_000858012.1 | hypothetical protein | - |
| QJP90_RS13730 (2836584) | 2836584..2836820 | - | 237 | WP_000554153.1 | regulatory protein YcgZ | - |
| QJP90_RS13735 (2837134) | 2837134..2838345 | + | 1212 | WP_001311624.1 | blue light-responsive regulator BluF | - |
| QJP90_RS13740 (2838550) | 2838550..2839281 | + | 732 | WP_000332288.1 | DNA-binding transcriptional repressor BluR | - |
| QJP90_RS13745 (2839502) | 2839502..2839906 | + | 405 | WP_000373104.1 | DUF1398 domain-containing protein | - |
| QJP90_RS13750 (2839959) | 2839959..2840084 | + | 126 | WP_023146274.1 | hypothetical protein | - |
| QJP90_RS13755 (2840168) | 2840168..2840335 | - | 168 | Protein_2703 | isocitrate/isopropylmalate family dehydrogenase | - |
| QJP90_RS13765 (2842024) | 2842024..2842938 | + | 915 | WP_001256622.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| QJP90_RS13770 (2842938) | 2842938..2843765 | + | 828 | WP_000983701.1 | Colicin-E3 | VF |
| QJP90_RS13775 (2843762) | 2843762..2844619 | + | 858 | WP_001101732.1 | hypothetical protein | ARG |
| QJP90_RS13780 (2844616) | 2844616..2845473 | + | 858 | WP_000968127.1 | hypothetical protein | ARG |
| QJP90_RS13785 (2845565) | 2845565..2845858 | - | 294 | WP_000355360.1 | hypothetical protein | - |
| QJP90_RS13790 (2845871) | 2845871..2846149 | - | 279 | WP_000654168.1 | hypothetical protein | - |
| QJP90_RS13795 (2846317) | 2846317..2847930 | - | 1614 | WP_000080195.1 | IS66 family transposase ISEc23 | Transposase |
| QJP90_RS13800 (2847961) | 2847961..2848311 | - | 351 | WP_000624722.1 | IS66 family transposase ISEc23 | Transposase |
| QJP90_RS13805 (2848308) | 2848308..2848733 | - | 426 | WP_000422741.1 | IS66 family transposase ISEc23 | Transposase |
| QJP90_RS13810 (2848815) | 2848815..2850743 | - | 1929 | WP_001545960.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP90_RS13815 (2850802) | 2850802..2854200 | - | 3399 | WP_001545959.1 | host specificity protein J | - |
| QJP90_RS13820 (2854261) | 2854261..2854833 | - | 573 | WP_001545958.1 | tail assembly protein | - |
| QJP90_RS13825 (2854830) | 2854830..2855573 | - | 744 | WP_000194748.1 | C40 family peptidase | - |
| QJP90_RS13830 (2855579) | 2855579..2856277 | - | 699 | WP_001152542.1 | phage minor tail protein L | - |
| QJP90_RS13835 (2856277) | 2856277..2856606 | - | 330 | WP_000847387.1 | phage tail protein | - |
| QJP90_RS13840 (2856603) | 2856603..2859164 | - | 2562 | WP_000840282.1 | phage tail tape measure protein | - |
| QJP90_RS13845 (2859157) | 2859157..2859591 | - | 435 | WP_000459449.1 | phage tail assembly protein T | - |
| QJP90_RS13850 (2859573) | 2859573..2859995 | - | 423 | WP_000479204.1 | phage minor tail protein G | - |
| QJP90_RS13855 (2860011) | 2860011..2860751 | - | 741 | WP_001545921.1 | phage tail protein | - |
| QJP90_RS13860 (2860759) | 2860759..2861154 | - | 396 | WP_000683150.1 | phage minor tail U family protein | - |
| QJP90_RS13865 (2861151) | 2861151..2861729 | - | 579 | WP_001007370.1 | phage tail protein | - |
| QJP90_RS13870 (2861741) | 2861741..2862094 | - | 354 | WP_001204540.1 | head-tail joining protein | - |
| QJP90_RS13875 (2862087) | 2862087..2862461 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP90_RS13880 (2862513) | 2862513..2863541 | - | 1029 | WP_000522650.1 | major capsid protein | - |
| QJP90_RS13885 (2863599) | 2863599..2863946 | - | 348 | WP_000256813.1 | head decoration protein | - |
| QJP90_RS13890 (2863983) | 2863983..2865488 | - | 1506 | WP_001253893.1 | S49 family peptidase | - |
| QJP90_RS13895 (2865478) | 2865478..2867070 | - | 1593 | Protein_2731 | phage portal protein | - |
| QJP90_RS13900 (2867067) | 2867067..2867273 | - | 207 | WP_000258997.1 | phage head-stabilizing protein | - |
| QJP90_RS13905 (2867257) | 2867257..2869185 | - | 1929 | WP_001573719.1 | phage terminase large subunit family protein | - |
| QJP90_RS13910 (2869157) | 2869157..2869705 | - | 549 | WP_000867568.1 | terminase small subunit | - |
| QJP90_RS13915 (2869787) | 2869787..2870065 | - | 279 | WP_012896773.1 | hypothetical protein | - |
| QJP90_RS13920 (2870016) | 2870016..2870198 | + | 183 | WP_001205136.1 | hypothetical protein | - |
| QJP90_RS13925 (2870297) | 2870297..2870671 | - | 375 | WP_000084844.1 | hypothetical protein | - |
| QJP90_RS13930 (2870710) | 2870710..2871153 | - | 444 | WP_001441931.1 | lysis protein | - |
| QJP90_RS13935 (2871150) | 2871150..2871647 | - | 498 | WP_000075094.1 | lysozyme RrrD | - |
| QJP90_RS13940 (2871647) | 2871647..2871862 | - | 216 | WP_000839596.1 | phage lysis protein EssD | - |
| QJP90_RS13945 (2872452) | 2872452..2873534 | + | 1083 | WP_000737277.1 | porin OmpC | - |
| QJP90_RS13950 (2873723) | 2873723..2874106 | - | 384 | WP_001204794.1 | antitermination protein QuuD | - |
| QJP90_RS13955 (2874192) | 2874192..2874332 | - | 141 | WP_000971095.1 | YlcG family protein | - |
| QJP90_RS13960 (2874329) | 2874329..2874691 | - | 363 | WP_001099697.1 | crossover junction endodeoxyribonuclease RusA | - |
| QJP90_RS13965 (2874688) | 2874688..2874978 | - | 291 | WP_000774475.1 | DUF1364 domain-containing protein | - |
| QJP90_RS13970 (2874971) | 2874971..2875141 | - | 171 | WP_000224907.1 | NinE family protein | - |
| QJP90_RS13975 (2875141) | 2875141..2875596 | - | 456 | WP_001053004.1 | DNA base-flipping protein YbcN | - |
| QJP90_RS13980 (2875593) | 2875593..2875694 | - | 102 | WP_072093903.1 | hypothetical protein | - |
| QJP90_RS13985 (2876044) | 2876044..2877087 | + | 1044 | WP_000700204.1 | alpha/beta hydrolase | - |
| QJP90_RS13990 (2877437) | 2877437..2878963 | - | 1527 | WP_000709098.1 | Virulence factors putative positive transcription regulator BvgA ; Integrase | Integrase |
| QJP90_RS13995 (2879021) | 2879021..2879170 | - | 150 | WP_032143398.1 | hypothetical protein | - |
| QJP90_RS14000 (2879219) | 2879219..2879551 | - | 333 | WP_001070442.1 | SMR family multidrug efflux protein EmrE | - |
| QJP90_RS14005 (2879619) | 2879619..2879921 | - | 303 | WP_000145918.1 | protein ren | - |
| QJP90_RS14010 (2879918) | 2879918..2880619 | - | 702 | WP_000788877.1 | replication protein P | - |
| QJP90_RS14015 (2880616) | 2880616..2881635 | - | 1020 | WP_000147914.1 | replication protein | - |
| QJP90_RS14020 (2881632) | 2881632..2882171 | - | 540 | WP_001182881.1 | toxin YdaT domain-containing protein | - |
| QJP90_RS14025 (2882202) | 2882202..2882429 | - | 228 | WP_000184665.1 | helix-turn-helix domain-containing protein | - |
| QJP90_RS14030 (2882540) | 2882540..2883232 | + | 693 | WP_000712396.1 | helix-turn-helix transcriptional regulator | - |
| QJP90_RS14035 (2883313) | 2883313..2884374 | + | 1062 | WP_000380252.1 | hypothetical protein | - |
| QJP90_RS14040 (2884352) | 2884352..2884729 | + | 378 | WP_000866321.1 | ASCH domain-containing protein | - |
| QJP90_RS14045 (2885205) | 2885205..2885411 | + | 207 | WP_000233576.1 | phage encoded cell division inhibitor protein | - |
| QJP90_RS14050 (2885487) | 2885487..2885783 | + | 297 | WP_000995417.1 | host-nuclease inhibitor Gam family protein | - |
| QJP90_RS14055 (2885789) | 2885789..2886574 | + | 786 | WP_000100847.1 | phage recombination protein Bet | - |
| QJP90_RS14060 (2886571) | 2886571..2887251 | + | 681 | WP_000186858.1 | YqaJ viral recombinase family protein | - |
| QJP90_RS14065 (2887248) | 2887248..2887430 | + | 183 | WP_000149539.1 | DUF1317 domain-containing protein | - |
| QJP90_RS14070 (2887403) | 2887403..2887594 | + | 192 | WP_000548537.1 | DUF1382 family protein | - |
| QJP90_RS14075 (2887671) | 2887671..2887886 | + | 216 | WP_000188880.1 | hypothetical protein | - |
| QJP90_RS14080 (2887985) | 2887985..2888203 | + | 219 | WP_000763364.1 | TraR/DksA family transcriptional regulator | - |
| QJP90_RS14085 (2888251) | 2888251..2888490 | + | 240 | WP_000488406.1 | DUF4222 domain-containing protein | - |
| QJP90_RS14090 (2888630) | 2888630..2888866 | + | 237 | WP_000088653.1 | excisionase | - |
| QJP90_RS14095 (2888856) | 2888856..2889998 | + | 1143 | WP_282500398.1 | Glutamine transport ATP-binding protein GlnQ ; Integrase | Integrase |
| QJP90_RS14100 (2890112) | 2890112..2891362 | - | 1251 | WP_000444487.1 | NADP-dependent isocitrate dehydrogenase | - |
| QJP90_RS14105 (2891534) | 2891534..2892187 | + | 654 | WP_001248677.1 | 23S rRNA pseudouridine(2457) synthase RluE | - |
| QJP90_RS14110 (2892197) | 2892197..2892658 | + | 462 | WP_000476093.1 | phosphatase NudJ | - |
| QJP90_RS14115 (2892712) | 2892712..2893818 | + | 1107 | WP_001295972.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| QJP90_RS14120 (2893854) | 2893854..2894495 | + | 642 | WP_001295971.1 | high frequency lysogenization protein HflD | - |
| QJP90_RS14125 (2894499) | 2894499..2895869 | + | 1371 | WP_000423736.1 | adenylosuccinate lyase | - |
| QJP90_RS14130 (2896038) | 2896038..2896709 | + | 672 | WP_001265481.1 | hypothetical protein | VF |
| QJP90_RS14135 (2896709) | 2896709..2898169 | + | 1461 | WP_000735412.1 | two-component system sensor histidine kinase PhoQ | - |
| QJP90_RS14140 (2898245) | 2898245..2899366 | + | 1122 | WP_001295435.1 | [50S ribosomal protein L16]-arginine 3-hydroxylase | - |
| QJP90_RS14145 (2899415) | 2899415..2900641 | - | 1227 | WP_001545930.1 | peptidase T | - |
| QJP90_RS14150 (2900891) | 2900891..2902027 | + | 1137 | WP_000531594.1 | Thermostable monoacylglycerol lipase | VF |
| QJP90_RS14155 (2902011) | 2902011..2902874 | + | 864 | WP_000799406.1 | spermidine/putrescine ABC transporter permease PotB | - |
| QJP90_RS14160 (2903106) | 2903106..2903279 | - | 174 | Protein_2784 | tail fiber assembly protein | - |
| QJP90_RS14165 (2903429) | 2903429..2904097 | + | 669 | WP_000240999.1 | class I SAM-dependent methyltransferase | - |
| QJP90_RS14170 (2904152) | 2904152..2904736 | - | 585 | WP_001545928.1 | tail fiber assembly protein | - |
| QJP90_RS14175 (2904736) | 2904736..2907762 | - | 3027 | WP_094315386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| QJP90_RS14180 (2907914) | 2907914..2908513 | - | 600 | WP_044066009.1 | Acetyltransferase | VF |
| QJP90_RS14185 (2908581) | 2908581..2912273 | - | 3693 | WP_032198501.1 | phage tail protein | - |
| QJP90_RS14190 (2912617) | 2912617..2913198 | - | 582 | WP_001090032.1 | tail assembly protein | - |
| QJP90_RS14195 (2913195) | 2913195..2913938 | - | 744 | WP_000194711.1 | C40 family peptidase | - |
| QJP90_RS14200 (2913949) | 2913949..2914647 | - | 699 | WP_001348269.1 | phage minor tail protein L | - |
| QJP90_RS14205 (2914647) | 2914647..2914976 | - | 330 | WP_000847298.1 | phage tail protein | - |
| QJP90_RS14210 (2914973) | 2914973..2917534 | - | 2562 | WP_001556919.1 | phage tail tape measure protein | - |
| QJP90_RS14215 (2917515) | 2917515..2917928 | - | 414 | WP_094315422.1 | phage tail assembly protein T | - |
| QJP90_RS14220 (2917955) | 2917955..2918386 | - | 432 | WP_001309426.1 | phage minor tail protein G | - |
| QJP90_RS14225 (2918405) | 2918405..2919154 | - | 750 | WP_000235047.1 | phage tail protein | - |
| QJP90_RS14230 (2919162) | 2919162..2919557 | - | 396 | WP_000683079.1 | phage minor tail U family protein | - |
| QJP90_RS14235 (2919554) | 2919554..2920087 | - | 534 | WP_000974996.1 | phage tail protein | - |
| QJP90_RS14240 (2920103) | 2920103..2920456 | - | 354 | WP_001204533.1 | head-tail joining protein | - |
| QJP90_RS14245 (2920449) | 2920449..2920823 | - | 375 | WP_000201530.1 | DNA-packaging protein FI | - |
| QJP90_RS14250 (2920875) | 2920875..2921903 | - | 1029 | WP_000522603.1 | major capsid protein | - |
| QJP90_RS14255 (2921961) | 2921961..2922308 | - | 348 | WP_000256814.1 | head decoration protein | - |
| QJP90_RS14260 (2922345) | 2922345..2923850 | - | 1506 | WP_001253888.1 | S49 family peptidase | - |
| QJP90_RS14265 (2923840) | 2923840..2925432 | - | 1593 | WP_001322425.1 | phage portal protein | - |
| QJP90_RS14270 (2925429) | 2925429..2925635 | - | 207 | WP_000258993.1 | gpW family head-tail joining protein | - |
| QJP90_RS14275 (2925619) | 2925619..2927547 | - | 1929 | WP_060624626.1 | phage terminase large subunit family protein | - |
| QJP90_RS14280 (2927519) | 2927519..2928028 | - | 510 | WP_000235436.1 | terminase small subunit | - |
| QJP90_RS14285 (2928685) | 2928685..2928864 | + | 180 | WP_000253883.1 | hypothetical protein | - |
| QJP90_RS14290 (2928987) | 2928987..2929313 | - | 327 | WP_000830178.1 | TonB family protein | - |
| QJP90_RS14295 (2929624) | 2929624..2930091 | - | 468 | WP_064773083.1 | lysis protein | - |
| QJP90_RS14300 (2930094) | 2930094..2930225 | - | 132 | WP_001280932.1 | hypothetical protein | - |
| QJP90_RS14305 (2930240) | 2930240..2930422 | - | 183 | WP_001446668.1 | hypothetical protein | - |
| QJP90_RS14310 (2930579) | 2930579..2931112 | - | 534 | WP_001092866.1 | lysozyme | - |
| QJP90_RS14315 (2931704) | 2931704..2932039 | - | 336 | Protein_2815 | YdfR family protein | - |
| QJP90_RS14320 (2932044) | 2932044..2932259 | - | 216 | WP_000284506.1 | class II holin family protein | - |
| QJP90_RS14325 (2932409) | 2932409..2932570 | - | 162 | WP_001309421.1 | hypothetical protein | - |
| QJP90_RS14330 (2932570) | 2932570..2932755 | - | 186 | Protein_2818 | DUF1737 domain-containing protein | - |
| QJP90_RS14335 (2933016) | 2933016..2933351 | + | 336 | WP_000871291.1 | anti-adapter protein IraM | - |
| QJP90_RS14340 (2933422) | 2933422..2933538 | + | 117 | Protein_2820 | hypothetical protein | - |
| QJP90_RS14345 (2933632) | 2933632..2933763 | - | 132 | WP_000562553.1 | DUF3927 family protein | - |
| QJP90_RS14360 (2934568) | 2934568..2935617 | - | 1050 | WP_001563803.1 | site-specific DNA-methyltransferase | - |
| QJP90_RS14365 (2935768) | 2935768..2935965 | - | 198 | WP_000917767.1 | hypothetical protein | - |
| QJP90_RS14370 (2936192) | 2936192..2937013 | - | 822 | WP_032265151.1 | antitermination protein | - |
| QJP90_RS14375 (2937010) | 2937010..2937390 | - | 381 | WP_094315389.1 | RusA family crossover junction endodeoxyribonuclease | - |
| QJP90_RS14380 (2937391) | 2937391..2938446 | - | 1056 | WP_094315388.1 | DUF968 domain-containing protein | - |
| QJP90_RS14385 (2938448) | 2938448..2938726 | - | 279 | WP_001410105.1 | hypothetical protein | - |
| QJP90_RS14390 (2938885) | 2938885..2938959 | - | 75 | Protein_2828 | hypothetical protein | - |
| QJP90_RS14395 (2939117) | 2939117..2940220 | - | 1104 | WP_000401168.1 | XRE family transcriptional regulator | - |
| QJP90_RS14400 (2940201) | 2940201..2940851 | - | 651 | WP_001004956.1 | hypothetical protein | - |
| QJP90_RS14405 (2941017) | 2941017..2941172 | - | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| QJP90_RS14410 (2941464) | 2941464..2941808 | - | 345 | WP_000206826.1 | hypothetical protein | - |
| QJP90_RS14415 (2941805) | 2941805..2941972 | - | 168 | WP_000207997.1 | hypothetical protein | - |
| QJP90_RS14420 (2941983) | 2941983..2942246 | - | 264 | WP_000224216.1 | hypothetical protein | - |
| QJP90_RS14425 (2942248) | 2942248..2942466 | - | 219 | WP_001142588.1 | DUF4014 family protein | - |
| QJP90_RS14430 (2942468) | 2942468..2942683 | - | 216 | WP_000510387.1 | hypothetical protein | - |
| QJP90_RS14435 (2942684) | 2942684..2943043 | - | 360 | WP_001289986.1 | hypothetical protein | - |
| QJP90_RS14440 (2943040) | 2943040..2943216 | - | 177 | WP_021534704.1 | hypothetical protein | - |
| QJP90_RS14445 (2943209) | 2943209..2943391 | - | 183 | WP_001224665.1 | hypothetical protein | - |
| QJP90_RS14450 (2943520) | 2943520..2943831 | - | 312 | WP_021534703.1 | hypothetical protein | - |
| QJP90_RS14455 (2943824) | 2943824..2944078 | - | 255 | WP_000004322.1 | hypothetical protein | - |
| QJP90_RS14460 (2944075) | 2944075..2944497 | - | 423 | WP_021534702.1 | DUF977 family protein | - |
| QJP90_RS14465 (2944538) | 2944538..2945500 | - | 963 | WP_000095673.1 | helix-turn-helix domain-containing protein | - |
| QJP90_RS14470 (2945523) | 2945523..2945948 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| QJP90_RS14475 (2945945) | 2945945..2946247 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| QJP90_RS14480 (2946346) | 2946346..2946717 | + | 372 | WP_001169687.1 | hypothetical protein | - |
| QJP90_RS14485 (2946738) | 2946738..2946929 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin Detail |
| QJP90_RS14490 (2946931) | 2946931..2947209 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| QJP90_RS14495 (2947501) | 2947501..2947653 | + | 153 | WP_000380313.1 | DUF1391 family protein | - |
| QJP90_RS14500 (2947665) | 2947665..2948003 | + | 339 | WP_000394541.1 | hypothetical protein | - |
| QJP90_RS14505 (2947992) | 2947992..2948186 | - | 195 | WP_001295058.1 | hypothetical protein | - |
| QJP90_RS14510 (2948753) | 2948753..2948941 | + | 189 | WP_000449172.1 | cell division inhibition protein DicB | - |
| QJP90_RS14515 (2948938) | 2948938..2949126 | + | 189 | WP_000199480.1 | DUF1482 family protein | - |
| QJP90_RS14520 (2949222) | 2949222..2951693 | + | 2472 | WP_032284123.1 | exonuclease | - |
| QJP90_RS14525 (2951755) | 2951755..2952024 | + | 270 | WP_000003742.1 | excisionase | - |
| QJP90_RS14530 (2951993) | 2951993..2953111 | + | 1119 | WP_000074983.1 | hypothetical protein ; Integrase | Integrase |
| QJP90_RS14535 (2953278) | 2953278..2954072 | + | 795 | WP_000580316.1 | spermidine/putrescine ABC transporter permease PotC | - |
| QJP90_RS14540 (2954069) | 2954069..2955115 | + | 1047 | WP_000759309.1 | spermidine/putrescine ABC transporter substrate-binding protein PotD | - |
| QJP90_RS14545 (2955173) | 2955173..2955634 | + | 462 | WP_001295970.1 | DUF3592 domain-containing protein | - |
| QJP90_RS14550 (2955631) | 2955631..2956419 | + | 789 | WP_000720215.1 | TPM domain-containing protein | - |
| QJP90_RS14555 (2956557) | 2956557..2957378 | - | 822 | WP_000952746.1 | NAD-dependent protein deacylase | - |
| QJP90_RS14560 (2957394) | 2957394..2958305 | - | 912 | WP_000291272.1 | N-acetylglucosamine kinase | - |
| QJP90_RS14565 (2958334) | 2958334..2959578 | - | 1245 | WP_023141434.1 | lipoprotein-releasing ABC transporter permease subunit LolE | - |
| QJP90_RS14570 (2959578) | 2959578..2960279 | - | 702 | WP_001033695.1 | Iron-sulfur cluster assembly scaffold protein IscU | VF |
| QJP90_RS14575 (2960272) | 2960272..2961471 | - | 1200 | WP_000284714.1 | lipoprotein-releasing ABC transporter permease subunit LolC | - |
| QJP90_RS14580 (2961732) | 2961732..2962805 | + | 1074 | WP_000810241.1 | acyltransferase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|